MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Tspan17 (ENSMUSG00000025875)

Cross Reference

GO	GO:0016021, GO:0019899, GO:0072594
goslim_goa	GO:0003674, GO:0005575, GO:0008150, ...show all
MGI_trans_name	Tspan17-008
OTTP	OTTMUSP00000050785
OTTT	OTTMUST00000092049
UCSC	uc007qpl.2
UniParc	UPI0001F78F1E
Uniprot/SPTREMBL	F7CRB7
Vega_transcript	OTTMUST00000092049, Tspan17-008
Vega_translation	214539, OTTMUSP00000050785

Definition

codon_start:2
protein_id:ENSMUSP00000128568
translation:

XKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSV
LGFAGCIGALRENTFLLKFDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGAR
GPNDWNLNIYFNCTDLNPSRERCGV

Chromosome

Length
Position(start - end)

5,502
54,789,645 - 54,795,148

Orient to Chromosome

plus

Link

Location : (13:54789645-54795148)
/

Detail Map

name	Eif4e1b (ENSMUSG00000074895)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Eif4e1b note : eukaryotic translation initiation factor 4E family member 1B [Source:MGI Symbol;Acc:MGI:2685119]

name	Tspan17 (ENSMUSG00000025875)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Tspan17 note : tetraspanin 17 [Source:MGI Symbol;Acc:MGI:1921507]

name	Eif4e1b (ENSMUSG00000074895)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000132728

name	Eif4e1b (ENSMUSG00000074895)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000110003

name	Tspan17 (ENSMUSG00000025875)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000026993

name	Tspan17 (ENSMUSG00000025875)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000131692

name	Tspan17 (ENSMUSG00000025875)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000163796

name	Tspan17 (ENSMUSG00000025875)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000163915

name	Tspan17 (ENSMUSG00000025875)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000099503

name	Tspan17 (ENSMUSG00000025875)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000171859

name	Tspan17 (ENSMUSG00000025875)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000130568

name	Tspan17 (ENSMUSG00000025875)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000145574

name	Tspan17 (ENSMUSG00000025875) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26536.1 RefSeq_peptide:NP_083117 RefSeq_mRNA:NM_028841.3 Vega_transcript:OTTMUST00000081270 Vega_transcript:Tspan17-001 Uniprot/SPTREMBL:Q3TAQ3 UCSC:uc007qpl.2 Fantom:F830004H06 EMBL:AC160106 EMBL:AC162526 EMBL:AK171691 EMBL:CH467070 GO:GO:0016021 GO:GO:0019899 GO:GO:0072594 MGI_trans_name:Tspan17-001 Vega_translation:214534 Vega_translation:OTTMUSP00000043443 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 goslim_goa:GO:0019899 protein_id:BAE42615.1 protein_id:EDL01070.1 OTTP:OTTMUSP00000043443 OTTT:OTTMUST00000081270 UniParc:UPI000002271A
definition	note : transcript_id=ENSMUST00000026993 protein_id : ENSMUSP00000026993 translation : MPGKHQQFQDPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLAQNLVSDIKAVKANW

name	Tspan17 (ENSMUSG00000025875) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006517477.1 Vega_transcript:OTTMUST00000081271 Vega_transcript:Tspan17-002 Uniprot/SPTREMBL:Q3TLW9 UCSC:uc007qpm.2 Fantom:G830027P05 EMBL:AC160106 EMBL:AC162526 EMBL:AK166272 EMBL:CH467070 GO:GO:0016021 GO:GO:0019899 GO:GO:0072594 MGI_trans_name:Tspan17-002 Vega_translation:214535 Vega_translation:OTTMUSP00000043444 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 goslim_goa:GO:0019899 protein_id:BAE38673.1 protein_id:EDL01068.1 OTTP:OTTMUSP00000043444 OTTT:OTTMUST00000081271 UniParc:UPI00005B222E
definition	note : transcript_id=ENSMUST00000131692 protein_id : ENSMUSP00000115287 translation : MPGKHQQFQDPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLAQNLVSDIKAVKANWITLGDGYKRLNKQHF

name	Tspan17 (ENSMUSG00000025875) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000092046 Vega_transcript:Tspan17-007 Uniprot/SPTREMBL:E9PWC3 UCSC:uc007qpl.2 EMBL:AC160106 EMBL:AC162526 GO:GO:0016021 GO:GO:0019899 GO:GO:0072594 MGI_trans_name:Tspan17-007 Vega_translation:214536 Vega_translation:OTTMUSP00000050782 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 goslim_goa:GO:0019899 OTTP:OTTMUSP00000050782 OTTT:OTTMUST00000092046 UniParc:UPI0001F78F1B
definition	note : transcript_id=ENSMUST00000163796 protein_id : ENSMUSP00000131671 translation : MPGKHQQFQDPEVGCCGKYFLFGFNIVFWFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLAQNL

name	Tspan17 (ENSMUSG00000025875) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000092047 Vega_transcript:Tspan17-006 Uniprot/SPTREMBL:E9QAJ5 UCSC:uc007qpl.2 EMBL:AC160106 EMBL:AC162526 GO:GO:0016021 GO:GO:0019899 GO:GO:0072594 MGI_trans_name:Tspan17-006 Vega_translation:214537 Vega_translation:OTTMUSP00000050783 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 goslim_goa:GO:0019899 OTTP:OTTMUSP00000050783 OTTT:OTTMUST00000092047 UniParc:UPI0001F78F1C
definition	note : transcript_id=ENSMUST00000163915 protein_id : ENSMUSP00000130765 translation : MPGKHQQFQDPEVGCCGKYFLFGFNIVFWFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYEDVLNTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQVQPWLAHPPPA

name	Tspan17 (ENSMUSG00000025875) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000092048 Vega_transcript:Tspan17-009 Uniprot/SPTREMBL:E9QN85 UCSC:uc007qpl.2 EMBL:AC160106 EMBL:AC162526 GO:GO:0016021 GO:GO:0019899 GO:GO:0072594 MGI_trans_name:Tspan17-009 Vega_translation:214538 Vega_translation:OTTMUSP00000050784 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 goslim_goa:GO:0019899 OTTP:OTTMUSP00000050784 OTTT:OTTMUST00000092048 UniParc:UPI0001F78F1D
definition	note : transcript_id=ENSMUST00000099503 protein_id : ENSMUSP00000097102 translation : MPGKHQQFQDPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDIRLKLVRRELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLAQNLVSDIKAVKANW

name	Tspan17 (ENSMUSG00000025875) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000092049 Vega_transcript:Tspan17-008 Uniprot/SPTREMBL:F7CRB7 UCSC:uc007qpl.2 GO:GO:0016021 GO:GO:0019899 GO:GO:0072594 MGI_trans_name:Tspan17-008 Vega_translation:214539 Vega_translation:OTTMUSP00000050785 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 goslim_goa:GO:0019899 OTTP:OTTMUSP00000050785 OTTT:OTTMUST00000092049 UniParc:UPI0001F78F1E
definition	codon_start : 2 note : transcript_id=ENSMUST00000171859 protein_id : ENSMUSP00000128568 translation : XKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGV

name	Tspan17 (ENSMUSG00000025875) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000081274 Vega_transcript:Tspan17-005 Uniprot/SPTREMBL:F6VW20 UCSC:uc007qpl.2 EMBL:AC160106 EMBL:AC162526 GO:GO:0016021 GO:GO:0019899 GO:GO:0072594 MGI_trans_name:Tspan17-005 Vega_translation:214540 Vega_translation:OTTMUSP00000043446 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 goslim_goa:GO:0019899 OTTP:OTTMUSP00000043446 OTTT:OTTMUST00000081274 UniParc:UPI0001889D0B
definition	note : transcript_id=ENSMUST00000130568 protein_id : ENSMUSP00000123607 translation : GVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAMSSIPSVAMTSDSNWSSSSRAPSTPKAVWASLRSGYKTT

name	Tspan17 (ENSMUSG00000025875) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000081272 Vega_transcript:Tspan17-003 Uniprot/SPTREMBL:F6R550 UCSC:uc007qpl.2 GO:GO:0016021 GO:GO:0019899 GO:GO:0072594 MGI_trans_name:Tspan17-003 Vega_translation:214541 Vega_translation:OTTMUSP00000043445 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 goslim_goa:GO:0019899 OTTP:OTTMUSP00000043445 OTTT:OTTMUST00000081272 UniParc:UPI0001889D0A
definition	codon_start : 2 note : transcript_id=ENSMUST00000145574 protein_id : ENSMUSP00000119687 translation : XFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLAQNLVSDIKAVKANWSLLSQTSPYSP

name
type	misc_feature
link
xref
definition	note : contig AC162526.3 61529..219418(1)

name
type	misc_feature
link
xref
definition	note : contig AC160106.2 1..152276(-1)

name	Tspan17 (ENSMUSG00000025875)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000081273 Vega_transcript:OTTMUST00000081273 MGI_trans_name:Tspan17-004 OTTT:OTTMUST00000081273
definition	note : retained_intron note : transcript_id=ENSMUST00000139574

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Tspan17 (ENSMUSG00000025875)
Transcript ID	ENSMUST00000171859

Reports
substitution
cSNPs	2
Insertion	3
Deletion	14
SNPs	-1kb 54784761(c.-4885G>A), 54784787(c.-4859G>A), 54784863(c.-4783G>A), 54784928(c.-4718G>T), 54785096(c.-4550C>T), 54785193(c.-4453G>A), 54785458(c.-4188G>A), 54785672(c.-3974C>T), 54785766(c.-3880T>C), 54785896(c.-3750G>T), 54786164(c.-3482T>C), 54786368(c.-3278G>T), 54786378(c.-3268T>C), 54786416(c.-3230A>G), 54786424(c.-3222G>A), 54786525(c.-3121G>A), 54786764(c.-2882A>G), 54786835(c.-2811C>T), 54786869(c.-2777T>C), 54786938(c.-2708T>C), 54786971(c.-2675C>T), 54787016(c.-2630A>G), 54787083(c.-2563T>A), 54787109(c.-2537C>T), 54787126(c.-2520T>G), 54787504(c.-2142A>T), 54787637(c.-2009C>T), 54787650(c.-1996C>T), 54787814(c.-1832G>C), 54788010(c.-1636T>C), 54788291(c.-1355A>G), 54788320(c.-1326A>G), 54788542(c.-1104A>G), 54788753(c.-893C>A), 54788754(c.-892T>G), 54788865(c.-781C>T), 54788960(c.-686A>G), 54788990(c.-656G>C), 5'UTR CDS 54792830(c.178T>C), 54793365(c.336C>T), 3'UTR INTRON 54789760(c.36+79C>T), 54789812(c.36+131C>T), 54790004(c.36+323A>G), 54790051(c.36+370C>T), 54790369(c.36+688C>T), 54790400(c.36+719G>T), 54790540(c.36+859T>G), 54790542(c.36+861G>A), 54790546(c.36+865A>G), 54790588(c.36+907G>A), 54790639(c.36+958C>G), 54790677(c.36+996C>T), 54790710(c.36+1029T>C), 54790719(c.36+1038C>A), 54790739(c.36+1058A>G), 54790824(c.36+1143G>A), 54790831(c.36+1150A>G), 54790992(c.36+1311G>T), 54791033(c.36+1352T>C), 54791069(c.36+1388G>A), 54791080(c.36+1399G>A), 54791305(c.37-1304A>C), 54791426(c.37-1183A>G), 54791500(c.37-1109T>C), 54791584(c.37-1025T>C), 54791648(c.37-961G>A), 54791738(c.37-871C>T), 54791756(c.37-853C>T), 54791784(c.37-825G>C), 54791826(c.37-783C>G), 54791856(c.37-753G>A), 54791946(c.37-663A>G), 54791948(c.37-661A>G), 54791949(c.37-660C>T), 54791987(c.37-622C>T), 54792074(c.37-535C>T), 54792477(c.37-132T>C), 54792529(c.37-80T>C), 54792537(c.37-72C>T), 54793022(c.234+136G>A), 54793051(c.234+165G>A), 54793078(c.235-186A>G), 54793085(c.235-179G>A), 54793100(c.235-164G>T), 54793101(c.235-163A>T), 54793107(c.235-157A>G), 54793372(c.336+7G>A), 54793384(c.336+19C>T), 54793424(c.336+59C>G), 54793498(c.336+133A>G), 54793509(c.336+144G>A), 54793557(c.336+192G>A), 54793803(c.336+438C>A), 54793886(c.336+521C>T), 54793891(c.336+526A>G), 54793897(c.336+532C>T), 54793933(c.336+568T>C), 54794342(c.337-711A>T), 54794343(c.337-710A>C), 54794381(c.337-672A>G), 54794421(c.337-632G>A), 54794505(c.337-548A>G), 54794522(c.337-531A>T), 54794524(c.337-529A>G), 54794575(c.337-478T>C), 54794777(c.337-276A>G), 54794995(c.337-58G>A), 54795028(c.337-25C>A), 54795046(c.337-7C>A), +1kb 54795314(c.166G>A), 54795356(c.208G>A), 54795366(c.218G>A), 54795368(c.220T>G), 54795394(c.246A>G), 54795619(c.471G>A), 54795829(c.681C>A), 54796320(c.1172C>T), 54796883(c.1735T>C), 54796920(c.1772A>G), 54797581(c.2433A>C), 54797669(c.2521A>G), 54797670(c.2522A>G), 54797796(c.2648G>A), 54797833(c.2685T>C), 54797852(c.2704A>G), 54797876(c.2728C>T), 54797877(c.2729T>G), 54797879(c.2731G>A), 54797905(c.2757C>T), 54797913(c.2765G>A), 54797917(c.2769G>A), 54798139(c.2991C>A), 54798168(c.3020T>C), 54798228(c.3080G>A), 54798238(c.3090C>T), 54798321(c.3173G>A), 54798510(c.3362A>G), 54798588(c.3440A>G), 54798642(c.3494A>G), 54798684(c.3536T>C), 54798702(c.3554C>T), 54799299(c.4151A>C), 54799788(c.4640A>G), 54799961(c.4813A>G), 54799994(c.4846A>G), 54800002(c.4854C>T), 54800023(c.4875C>T), 54800040(c.4892C>T), 54800089(c.4941G>C),
Insertions	-1kb 54785978 (c.-3668dupT), 5'UTR CDS 3'UTR INTRON 54792394 (c.37-212dupG), +1kb 54798624 (c.3476_3477insGG),
Deletions	-1kb 54785714 (c.-3931delG), 54787456 (c.-2189_-2182delACTATACT), 54787992 (c.-1653_-1650delTCTC), 54788162 (c.-1483_-1478delTCCCTC), 54788182 (c.-1463_-1462delCC), 54788190 (c.-1455_-1454delCC), 54788613 (c.-1032_-1028delTGGCA), 54788972 (c.-673_-670delAAAA), 5'UTR CDS 3'UTR INTRON 54790661 (c.36+982_36+985delGAGT), 54791329 (c.37-1275_37-1271delTAGAG), 54791340 (c.37-1268_37-1264delTAGAG), 54792688 (c.87+34_87+38delAGGGG), 54793400 (c.336+36delA), +1kb 54799789 (c.4642_4648delTCCTACA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	0
synonymous substitutions	54792830 (p.Leu60Leu), 54793365 (p.Tyr112Tyr),
non-synonymous substitutions
B6 transcript (ENSMUST00000171859)	KYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVL GFAGCIGALRENTFLLKFDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARG PNDWNLNIYFNCTDLNPSRERCGV
MSMv4 transcript	KYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVL GFAGCIGALRENTFLLKFDWIRDQLNLFINNNVKAYRDDLDLQNLIDFAQEYWSCCGARG PNDWNLNIYFNCTDLNPSRERCGV
homology	100.00 (144 / 144)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Tspan17 (ENSMUSG00000025875)
Transcript ID	ENSMUST00000171859


..........CTACACTGTGTGTGAATGCATGGCACTGTTCATTGGTCCCACTATTCCCA
ACCACTTATCCCTGGGGAGTGGACTCCTCTGGTTCTTGAATCTTAGACTGGAGATCCAAG
GTAATTATTCACACTTGGCTCACCAGCTTTGCCAGTTGGCTCATCTGGGGCCTCTGGAGG
ACTTGGGGAACTTGAGAGAAGCTAACTGGAGGACGGACTTAGAGAGGAGATGGGGACTCT
TCAGAGGTGGGGGTTGCAAGGGGTTGAGTGTGACTGGGGTGTAGCCAAAGCCTGGCCCAG
AGGCAGGGTCTTGGGGAGAAGTGAGGCCTGTGGACCATAAAAAAAAAAAAAAGACCGATG
TCTTGGGCGTGGCTCCAAGAAGGCCGACTGTGGCTCAGAACTGAGGCTGAGTAGGGCGGA
GCTCCAGGAGGACTGAGGCCGGTTGGAGGCGGGGTTTGGGGCTCATCAGAGGCGGGACCC
GGTTTAGAGGCGGAGCTCGAGAACAGAAGTTAGCTAGGGCAGAGCCTTGGGCGGGGCGTA
GGCGGGACTGCGGGAGGACAGCGGCTAGGCATGGGCGGAGCCTGAGAGGATTAAGCCCGG
CTGGGGGCGGAGTCGTGGTTATGGGCGGGGCCCGTGAGGACTGAACTTGACTGGGACGGG
GTCGTGGGCGGGGCTCCAAGAAGACCGAGCCTTGCTGGGGCGGGGTGTGGACTGACACTG
TGGGCGGGGCCGGAGCGCTGTTGGAGGGCGGGGTCGGATGAGGGCACCGCACTCCGGGTG
TGGCTGTCCGAGCGCCGTGGGCGGTGCCACAGCGGGCGGGGCAGCCGGTGAGCTGTGTGG
CTTTGACCATGAAGCCGCAGCCACCGGGCTAGGCCCGGGGCTGCTCCAGGCCTGGGCGGC
CCGCAGAGGGCTGGGCCGGTCACCGGCTCGGGTTCCCGGGACGGCAGGTGGCCGCTCACC
ATGCCCGGCAAGCACCAGCAATTCCAGGACCCTGAGGTCGGCTGCTGCGG
GAAATACTTCCTGTTTGGCTTCAACATTGTCTTCTGG
GTGAGCGCGAGTCCGCTTCTCGCTC..........CCCTGAACTCTCCCTGCTGTTGTAG
GTGCTGGGAGCCCTGTTCCTGGCCATTGGCCTCTGGGCCTGGGGTGAGAAG
GTAAGAGGGAGGGGCTGCCCAGGGG..........CACACTTGTCTGCTCCCCGGTGCAG
GGCGTTCTCTCCAACATCTCGGCGCTGACAGATCTGGGCGGTCTTGACCCCGTGTGGCTGTTTGTGGTGGTGGGGGGAGTCATGTCAGTGCTGGGCTTCGCCGGCTGCATTGGGGCCCTCCGGGAAAACACCTTCCTGCTCAAGTTC
GTGAGTCTTTCTCTAAGTCTCTCTC..........GGGGATCCTGGCCTTCGTCTTCAAG
GATTGGATCCGAGACCAACTTAATCTCTTCATCAACAACAATGTCAAAGCCTACCGGGATGATCTCGACCTTCAGAACCTTATCGACTTTGCTCAGGAATAT
GTGAGTATGGGCCTCATGTGTGTGA..........ACTCTGGACTCTTCTCTCACCCTAG
TGGTCTTGCTGTGGTGCCCGAGGGCCCAATGACTGGAACCTCAATATCTACTTCAACTGCACTGACTTGAACCCAAGCCGTGAGCGCTGTGGGGTG
CCCTTTTCCTGCTGTGTTAGGGACCCAGCGGTGAGTGGGCCCTGGGAGGAGGGAGGATCT
CTTAGCAGTAGGGAGGTGCATATCAGTGTGCTCCCGTGTCCGTGAGAGAACGAAGAAGTC
TGGAGTTTCACTGCAGTTGAGCAGACATGGTAAACCCAAGCTTCCATTTGCTTTTCTGTG
AAGGAGGGGCACTAGAGTTGAGGACCCAGGTGAGCCCACGGGTATTCCCTTAGCGTATTG
CTAATGGCCTGTCTCCCCTCAGGAAGATGTCCTCAATACCCAGTGTGGCTATGACATCCG
ACTCAAACTGGTGAGAAGGGTGGGGACAGGGTTGAGGGTAGCCTGGAGTACAGGGGGTGA
CATGGGGACCTCTCCTAAGGTCTTGTGGAAAGGTCTAAGGGCTTCTTCAGGGTGGAACTG
GCCCTGGGTAGGTTTGAGGTATTGGGTTGCTCATTCCACTTCTGTGGAGCACCTGCTGTG
GTTGGCACCGCTCTAGACCTTGCTTGATCCAGAGCTAAGGGGTCAGTTCTGCACTCAGGG
AATCGGTGGAGAAAAATGTGACATTGTAGGCTCATTAAATGGACAGTCCTGAGATAGCTC
AGGTGAGAGAATTTAGAAGGTTGACAGGTAGAGTCTGAGTCAGGGAAAGCCTCTTCAGAG
GAGACAGCCAGGCTGTGCAAAGGCCCTGTGGCAGAATTCCAAGGAGCTGACATTGTCAGG
GAGGGCACTGGAGCAGGGGTGGGCTGATCAAGGTGGAAGAGGGGCGGGGGATCTGAGCTG
AGGTGGGCAGGCCGAGCTTGGTCTCGTGTCTCCTCAGGAGCTCGAGCAGCAGGGCTCCAT
CTACACCAAAGGCTGTGTGGGCCAGTTTGAGAAGTGGCTACAAGACAACCTGATCGTGGT
GGCCGGGGTCTTGGTGGGGATCGCCCTCCTCCAGGTACAGCCTTGGCTTGCCCACCCTCC
TCCTGCCTGAAGCTCTTTCTTCTTCCTCACCTGCTCTCTG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CTACACTGTGTGTGAATGCATGGCACTGTTCATTGGTCCCACTATTCCCA ACCACTTATCCCTGGGGAGTGGACTCCTCTGGTTCTTGAATCTTAGACTGGAGATCCAAG GTAATTATTCACACTTGGCTCACCAGCTTTGCCAGTTGGCTCATCTGGGGCCTCTGGAGG ACTTGGGGAACTTGAGAGAAGCTAACTGGAGGACGGACTTAGAGAGGAGATGGGGACTCT TCAGAGGTGGGGGTTGCAAGGGGTTGAGTGTGACTGGGGTGTAGCCAAAGCCTGGCCCAG AGGCAGGGTCTTGGGGAGAAGTGAGGCCTGTGGACCATAAAAAAAAAAAAAAGACCGATG TCTTGGGCGTGGCTCCAAGAAGGCCGACTGTGGCTCAGAACTGAGGCTGAGTAGGGCGGA GCTCCAGGAGGACTGAGGCCGGTTGGAGGCGGGGTTTGGGGCTCATCAGAGGCGGGACCC GGTTTAGAGGCGGAGCTCGAGAACAGAAGTTAGCTAGGGCAGAGCCTTGGGCGGGGCGTA GGCGGGACTGCGGGAGGACAGCGGCTAGGCATGGGCGGAGCCTGAGAGGATTAAGCCCGG CTGGGGGCGGAGTCGTGGTTATGGGCGGGGCCCGTGAGGACTGAACTTGACTGGGACGGG GTCGTGGGCGGGGCTCCAAGAAGACCGAGCCTTGCTGGGGCGGGGTGTGGACTGACACTG TGGGCGGGGCCGGAGCGCTGTTGGAGGGCGGGGTCGGATGAGGGCACCGCACTCCGGGTG TGGCTGTCCGAGCGCCGTGGGCGGTGCCACAGCGGGCGGGGCAGCCGGTGAGCTGTGTGG CTTTGACCATGAAGCCGCAGCCACCGGGCTAGGCCCGGGGCTGCTCCAGGCCTGGGCGGC CCGCAGAGGGCTGGGCCGGTCACCGGCTCGGGTTCCCGGGACGGCAGGTGGCCGCTCACC ATGCCCGGCAAGCACCAGCAATTCCAGGACCCTGAGGTCGGCTGCTGCGG
1	EXON 1	54,789,645	54,789,681	-	0	37	GAAATACTTCCTGTTTGGCTTCAACATTGTCTTCTGG
	INTRON 1 - 2	54,789,682	54,792,608			2,927	GTGAGCGCGAGTCCGCTTCTCGCTC..........CCCTGAACTCTCCCTGCTGTTGTAG
2	EXON 2	54,792,609	54,792,659	0	0	51	GTGCTGGGAGCCCTGTTCCTGGCCATTGGCCTCTGGGCCTGGGGTGAGAAG
	INTRON 2 - 3	54,792,660	54,792,739			80	GTAAGAGGGAGGGGCTGCCCAGGGG..........CACACTTGTCTGCTCCCCGGTGCAG
3	EXON 3	54,792,740	54,792,886	0	0	147	GGCGTTCTCTCCAACATCTCGGCGCTGACAGATCTGGGCGGTCTTGACCCCGTGTGGCTG TTTGTGGTGGTGGGGGGAGTCATGTCAGTGCTGGGCTTCGCCGGCTGCATTGGGGCCCTC CGGGAAAACACCTTCCTGCTCAAGTTC
	INTRON 3 - 4	54,792,887	54,793,263			377	GTGAGTCTTTCTCTAAGTCTCTCTC..........GGGGATCCTGGCCTTCGTCTTCAAG
4	EXON 4	54,793,264	54,793,365	0	0	102	GATTGGATCCGAGACCAACTTAATCTCTTCATCAACAACAATGTCAAAGCCTACCGGGAT GATCTCGACCTTCAGAACCTTATCGACTTTGCTCAGGAATAT
	INTRON 4 - 5	54,793,366	54,795,052			1,687	GTGAGTATGGGCCTCATGTGTGTGA..........ACTCTGGACTCTTCTCTCACCCTAG
5	EXON 5	54,795,053	54,795,148	0	-	96	TGGTCTTGCTGTGGTGCCCGAGGGCCCAATGACTGGAACCTCAATATCTACTTCAACTGC ACTGACTTGAACCCAAGCCGTGAGCGCTGTGGGGTG
	3' upstream sequence						CCCTTTTCCTGCTGTGTTAGGGACCCAGCGGTGAGTGGGCCCTGGGAGGAGGGAGGATCT CTTAGCAGTAGGGAGGTGCATATCAGTGTGCTCCCGTGTCCGTGAGAGAACGAAGAAGTC TGGAGTTTCACTGCAGTTGAGCAGACATGGTAAACCCAAGCTTCCATTTGCTTTTCTGTG AAGGAGGGGCACTAGAGTTGAGGACCCAGGTGAGCCCACGGGTATTCCCTTAGCGTATTG CTAATGGCCTGTCTCCCCTCAGGAAGATGTCCTCAATACCCAGTGTGGCTATGACATCCG ACTCAAACTGGTGAGAAGGGTGGGGACAGGGTTGAGGGTAGCCTGGAGTACAGGGGGTGA CATGGGGACCTCTCCTAAGGTCTTGTGGAAAGGTCTAAGGGCTTCTTCAGGGTGGAACTG GCCCTGGGTAGGTTTGAGGTATTGGGTTGCTCATTCCACTTCTGTGGAGCACCTGCTGTG GTTGGCACCGCTCTAGACCTTGCTTGATCCAGAGCTAAGGGGTCAGTTCTGCACTCAGGG AATCGGTGGAGAAAAATGTGACATTGTAGGCTCATTAAATGGACAGTCCTGAGATAGCTC AGGTGAGAGAATTTAGAAGGTTGACAGGTAGAGTCTGAGTCAGGGAAAGCCTCTTCAGAG GAGACAGCCAGGCTGTGCAAAGGCCCTGTGGCAGAATTCCAAGGAGCTGACATTGTCAGG GAGGGCACTGGAGCAGGGGTGGGCTGATCAAGGTGGAAGAGGGGCGGGGGATCTGAGCTG AGGTGGGCAGGCCGAGCTTGGTCTCGTGTCTCCTCAGGAGCTCGAGCAGCAGGGCTCCAT CTACACCAAAGGCTGTGTGGGCCAGTTTGAGAAGTGGCTACAAGACAACCTGATCGTGGT GGCCGGGGTCTTGGTGGGGATCGCCCTCCTCCAGGTACAGCCTTGGCTTGCCCACCCTCC TCCTGCCTGAAGCTCTTTCTTCTTCCTCACCTGCTCTCTG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Tspan17 (ENSMUSG00000025875)
Transcript ID	ENSMUST00000171859

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 144 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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