top page

Tutorials are available here.

Target CDS Information

Gene Symbol (Gene ID) Ddx46 (ENSMUSG00000021500)
Cross Reference
CCDS CCDS70464.1
EMBL AK129220, BC026492, BC092240
GO GO:0000398, GO:0004004, GO:0005524, ...show all
goslim_goa GO:0003674, GO:0003723, GO:0004386, ...show all
MGI_trans_name Ddx46-202
protein_id AAH26492.1, AAH92240.1, BAC98030.2
RefSeq_mRNA NM_001282055.1
RefSeq_mRNA_predicted XM_006517202.2
RefSeq_peptide NP_001268984
RefSeq_peptide_predicted XP_006517265.1
UCSC uc033gma.1
UniParc UPI0000473035
Uniprot/SWISSPROT Q569Z5
Definition protein_id:ENSMUSP00000133245
translation:
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKTKKTENRSRS
KEKAEGGDSSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVK
KFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQEGGQSESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL

Chromosome 13
Length
Position(start - end)
43,651
55,635,179 - 55,678,831
Orient to Chromosome plus
Link Location : (13:55635179-55678831)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Ddx46 (ENSMUSG00000021500)
Transcript ID ENSMUST00000172272
Reports
substitution
cSNPs9
Insertion36
Deletion59
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num9
non-synonymous num0
synonymous substitutions 55639917 (p.Thr111Thr), 55652064 (p.Thr262Thr), 55652148 (p.Asp290Asp), 55663883 (p.Ala632Ala), 55673961 (p.Ser819Ser), 55674024 (p.Ala840Ala), 55674067 (p.Leu855Leu), 55674084 (p.Asn860Asn), 55676799 (p.Glu954Glu),
non-synonymous substitutions
B6 transcript
(ENSMUST00000172272)
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKTKKTENRSRS
KEKAEGGDSSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVK
KFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQEGGQSESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL*
MSMv4 transcript
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKTKKTENRSRS
KEKAEGGDSSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVK
KFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQEGGQSESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL*
homology100.00 (1033 / 1033)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Ddx46 (ENSMUSG00000021500)
Transcript ID ENSMUST00000172272
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........GGTGTTCTTCTAGAATGCATTGTCTGTTCCTTTTCTGTTTTTGAGTTTGT
TTTAAAATAGTTGCTCAGTGGTTCCCTTTATTAGGCCTAATTGGTTTTCATGAAAACATC
CTTTTCCTAGGAAGGCATAGACGCCTCCATTTTTTGCAGTCATGAAGTTAGTCTTTTGCA
GTCTTGGAGGACCTCTGTAGGTAGGGAATCTATTTGCTCTTGCTTTGCTTTGTTCTACCA
AGGCCAGGTTGTCTTTAATCTGATTGGTCATTTGAGGTGTTTGTAGGCATAGGAAATCCT
TTGGGAGGGCTTCTTTGTTCCAGTATAGGGGTAAGTTCGGTAAGTAAAACACTTAAAGGA
CAGGTCAAAATATGAATATAAAGATAATAAGCAGAAATGGAGTAATCCAGACAAAGAGCC
AGAGCAGGAGGGAGGCCCGTGCTTTTTGTCTGGTGCCTTTGGGCCCCATTTCCTGAGCGG
TTGAATGGATCATGTATTCCCCGCTGCCCCGAAAGCTTCCCAGTGTTAAGAACTATTATA
ATCCTTAGTGCAGTTTATCTCTGTTCTGTAGATTCTAAGTCTTCACATCTCATATTGAAG
AGTCTTTCCTCTTCAGTATGACGCTTCTTGTGTCGGAGACACATCACTACTATTAGTTGT
CAGGATCTGGCATACACATAAGTGACTCAGTACGGAGCATATAAGGAGACAGGAGCATTA
TTTAATGCAGATTAAGGCAAACAGACACACTCCCTGGGAGAGCCGCAGGCTGCATTAGGT
TCCTCGGTGGTCTGCAGCGAAGACCCTTTGCAAGGCTGACCTGGCTGATGGCACACTCCA
TAGCGCCAAAAAGGGCTGCGGGTTGCGCTAGAAAAGTAAGCTGTTGCTGCCGGCGCAGCC
CGCGCCGCGCGGCCTCCAGCCGGTTGGTGGCGCTCTGGAGAAGCAGCCGCTTCCTTCCGC
CCGCTCCTTCCTTCCGCACCCCGGCACCAGCACATCCTGTTTTCGTTGGC
1 EXON 1 55,635,027 55,635,195 - 2 169
CACGCTCTGATGGCGGTCACTGCTGGAGCTCTGTCCATTTCGTAGGACCGGTCCTCGCTC
GGTACCGTGAGAGCTTGCTGCCTCCCTCCTTTGTCCTCTTCATAGGCCTGCGCATCGTCC
CCGAGGGCGCAGGCCTTCTGCTGGCCGGCAGCATGGGCCGGGAGTCTCG
INTRON 1 - 2 55,635,196 55,638,025 2,830
GTGAGTCCGCGGGCGAGCGGCTTCT..........GATCTTGGATTTGATACTGTTGTAG
2 EXON 2 55,638,026 55,638,214 2 2 189
CCACTACCGAAAACGCTCAGCATCTCGAGGTCGTTCTGGAAGTCGATCGAGGAGTCGCTC
ACCCTCTGACAAAAGAAGCAAACGTGGGGATGACAGACGCTCTCGGAGCAGAGACAGAGA
CCGGAGGAGAGAGAGGTCTCGGAGTAGGGACAAGAGAAGATCTCGGTCAAGGGACAGGAA
GCGCCTGAG
INTRON 2 - 3 55,638,215 55,639,790 1,576
GTAAGACGTCCAGTTCTGCAGAACC..........AATAAAAGAAAACTCTTCCCGTCAG
3 EXON 3 55,639,791 55,639,934 2 2 144
GCGCTCCAGAAGTAGAGAGCGAGACAGAAGCCGAGAGCGGAGAAGATCTCGGAGCAGAGA
TAGAAGGCGCTCAAGGAGTCGAAGCCGGGGCAGGCGGTCCCGGTCCTCCAGTCCTGGCAG
CAAAACGAAGAAGACTGAGAACAG
INTRON 3 - 4 55,639,935 55,645,370 5,436
GTAACGCCGTCCTCAGACTGCGCCT..........TCTTACTCTCTCTATTCTTCGGTAG
4 EXON 4 55,645,371 55,645,467 2 0 97
GTCTAGGTCCAAAGAGAAAGCAGAAGGTGGGGACAGCTCCAAGGAGAAGAAAAAGGACAA
GGATGACAAGGAGGACGAGAAAGAGAAGGATGCTGGG
INTRON 4 - 5 55,645,468 55,647,626 2,159
GTAGGTCAGCTGGCCCCAGGGCCGC..........ATTTTCCCTCTTCCCTCCCCAAAAG
5 EXON 5 55,647,627 55,647,792 0 1 166
AACTTTGACCAGAATAAACTGGAAGAAGAAATGAGAAAACGGAAAGAAAGAGTTGAAAAA
TGGCGCGAAGAGCAGCGTAAGAAGGCTATGGAGAACATAGGAGAGCTGAAGAAGGAGATT
GAGGAGATGAAGCAGGGGAAGAAGTGGAGCTTGGAGGACGACGACG
INTRON 5 - 6 55,647,793 55,650,414 2,622
GTAGGTCTGGGCTGCGGGTGGCGCC..........TGGGCGAGTGGCTCTGCTGTTTTAG
6 EXON 6 55,650,415 55,650,566 1 0 152
ATGATGAAGATGATCCTGCCGAGGCTGAGAAGGAAGGGACTGAAATGGAGGACGAGGAGC
TGGACCCATTAGACGCCTACATGGAAGAAGTGAAGGAAGAGGTAAAAAAGTTTAACATGA
GGAGCGTGAAAGGCGGCGCAGGAAATGAGAAG
INTRON 6 - 7 55,650,567 55,652,043 1,477
GTACGTGGACAGCCGGCATTGCTCA..........TTTTAATCCTTCTTTTTTATTTTAG
7 EXON 7 55,652,044 55,652,157 0 0 114
AAGTCTGGGCCAACAGTCACGAAAGTTGTCACTGTGGTGACCACCAAGAAAGCAGTAGTA
GACGCGGATAAGAAGAAGGGGGAACTCATGGAGAATGACCAGGATGCCATGGAG
INTRON 7 - 8 55,652,158 55,652,912 755
GTGAGGCAGCCTGCCCGAGTCTGAC..........TACTTTTTGTTCCCCAAAATTCAAG
8 EXON 8 55,652,913 55,653,078 0 1 166
TATTCCTCAGAGGAGGAGGAAGTTGACCTTCAAACGGCCCTCACAGGCTACCAGACAAAA
CAGAGAAAACTTCTAGAGCCAGTTGATCATGGAAAAATTGAATATGAGCCATTCAGAAAA
AACTTTTATGTTGAAGTTCCAGAATTAGCAAAAATGTCTCAAGAAG
INTRON 8 - 9 55,653,079 55,653,601 523
GTAAGATGCTGTGTGAGTTTTATTC..........TTCTAACTGGAGCTTTGTTTTCTAG
9 EXON 9 55,653,602 55,653,722 1 2 121
AGGTGAATGTGTTTCGATTGGAAATGGAGGGCATTACAGTTAAAGGAAAAGGTTGCCCGA
AACCAATTAAATCATGGGTCCAGTGTGGAATTTCCATGAAGATACTAAATTCCCTCAAAA
A
INTRON 9 - 10 55,653,723 55,654,003 281
GTAAGTATTGGTGGTTATCTGCGTT..........TGCATTCTTTTTGTTTCTTTTTAAG
10 EXON 10 55,654,004 55,654,179 2 1 176
GCATGGCTATGAAAAGCCAACACCAATCCAAACTCAAGCGATTCCTGCTATAATGTCTGG
ACGAGATTTGATTGGCATTGCCAAGACAGGAAGTGGAAAAACCATTGCTTTTCTTTTGCC
CATGTTTAGACACATCATGGATCAGAGGTCATTAGAAGAAGGAGAGGGACCAATAG
INTRON 10 - 11 55,654,180 55,655,008 829
GTACAAGTCTTCTCATTACATCATT..........GGCTTTGACATATTTCTCTTTTCAG
11 EXON 11 55,655,009 55,655,130 1 0 122
CTGTCATCATGACTCCAACTCGAGAGCTGGCTTTACAAATCACTAAAGAATGTAAGAAGT
TTTCGAAGACCTTGGGACTGAGAGTGGTCTGTGTGTATGGAGGGACAGGAATCAGCGAGC
AG
INTRON 11 - 12 55,655,131 55,659,019 3,889
GTAGTTAGAATAAAGCACTCGTCTG..........ATACAATCTCATCCTGTCTCACTAG
12 EXON 12 55,659,020 55,659,098 0 1 79
ATTGCTGAGCTGAAAAGAGGTGCTGAAATTATTGTTTGCACACCTGGTCGAATGATTGAC
ATGTTAGCGGCTAACAGTG
INTRON 12 - 13 55,659,099 55,660,716 1,618
GTAAGTCACGGGTATTTTATTATTT..........TCTCTCTTTTCTCTTCTCACGTTAG
13 EXON 13 55,660,717 55,660,799 1 0 83
GTCGGGTCACAAATCTTCGAAGAGTGACATATGTTGTTTTAGATGAAGCAGACAGAATGT
TTGACATGGGTTTTGAACCACAG
INTRON 13 - 14 55,660,800 55,663,218 2,419
GTAATCATTCAATTTCTTTGTAAAT..........CGTATTTGTATATGTCATTTTTCAG
14 EXON 14 55,663,219 55,663,383 0 0 165
GTCATGCGCATTGTGGATAACGTTCGTCCTGACCGACAGACAGTTATGTTTTCAGCCACT
TTCCCTAGAGCTATGGAGGCTTTGGCCCGCAGGATCCTGAGCAAACCTATTGAAGTGCAG
GTTGGAGGCAGGAGTGTGGTTTGCTCCGATGTGGAACAGCAGGTG
INTRON 14 - 15 55,663,384 55,663,778 395
GTAGGTACCATGTTCAGGAAGGTGC..........ACTTGCTACATTGTGGTATTTTCAG
15 EXON 15 55,663,779 55,663,941 0 1 163
ATTGTGATTGAAGAAGAAAAGAAATTCTTGAAATTGCTGGAGCTTTTAGGCCATTATCAG
GAGTCAGGATCTGTCATTATATTTGTGGATAAGCAGGAACACGCGGATGGTCTTCTGAAG
GACTTGATGAGAGCATCGTACCCTTGCATGTCTCTTCACGGAG
INTRON 15 - 16 55,663,942 55,666,186 2,245
GTGACGATTACTTACCTACTAGCAT..........ATTTGTCTCTTTAATTTACTTGCAG
16 EXON 16 55,666,187 55,666,380 1 0 194
GTATTGATCAATATGACAGGGACAGTATCATAAATGACTTTAAGAATGGAACCTGCAAGC
TCCTCGTTGCCACATCTGTTGCAGCTCGTGGTCTCGATGTGAAACATCTAATTCTTGTAG
TGAATTACAGCTGCCCCAATCATTATGAAGATTATGTGCACAGAGCTGGGCGGACTGGAA
GAGCGGGCAACAAG
INTRON 16 - 17 55,666,381 55,669,711 3,331
GTAAGCCCTTACAACCGCGTCTGTG..........TCATTGTCCTTCTCATTGTCATCAG
17 EXON 17 55,669,712 55,669,849 0 0 138
GGTTATGCCTACACCTTCATCACAGAGGATCAAGCTCGATATGCTGGTGACATCATTAAA
GCTCTTGAATTGTCAGGGACCGCAGTGCCTCCTGACCTAGAAAAACTCTGGAGTGACTTC
AAAGATCAACAGAAAGCT
INTRON 17 - 18 55,669,850 55,670,203 354
GTGAGTTTTAAACTTTCTTTGGAGG..........ACTTTGCTAACTTTTTTCTTAAAAG
18 EXON 18 55,670,204 55,670,353 0 0 150
GAAGGAAAAATAATTAAAAAGAGTAGTGGCTTCTCTGGCAAGGGATTCAAGTTTGATGAA
ACAGAACAGGCTTTAGCCAATGAGAGGAAAAAGCTGCAGAAAGCTGCTCTTGGCCTGCAA
GATTCTGATGACGAGGATGCTGCAGTTGAT
INTRON 18 - 19 55,670,354 55,673,940 3,587
GTAAGTATTGAGTCTGCACGTGCGC..........GATTTGTTTTTCTCTCCTGTCCTAG
19 EXON 19 55,673,941 55,674,117 0 0 177
ATTGATGAACAGATTGAAAGTATGTTTAATTCAAAGAAGAGAGTAAAGGACATGGCTGCA
CCCGGCACATCCAGCGTGCCCGCACCCACTGCAGGCAATGCTGAGAAGCTAGAAATCGCC
AAGAGACTGGCTCTCAGAATCAATGCTCAGAAGAACCTGGGCATCGAGTCTCAGGTA
INTRON 19 - 20 55,674,118 55,675,895 1,778
TTAAGTAATTTGTTCCGAGCCATTG..........AACTGGAGCTCTTCCTTAACTGTAG
20 EXON 20 55,675,896 55,676,114 0 0 219
GATGTGATGCAGCAGGCCACCAACGCCATCCTCAGAGGTGGCACTATCCTGGCTCCCACT
GTGTCTGCGAAAACCATTGCAGAGCAGCTTGCTGAGAAGATCAATGCCAAGCTCAACTAC
GTGCCTTTGGAGAAGCAGGAGGAAGAGAGACAGGAGGGTGGGCAGAGCGAGTCTTTCAAG
AGATACGAGGAAGAATTAGAAATTAATGACTTCCCACAG
INTRON 20 - 21 55,676,115 55,676,769 655
GCAAGTGACAGATTGAAAGGTTCTC..........GTGACTCCCCAACCCTTTCTTTCAG
21 EXON 21 55,676,770 55,676,914 0 1 145
ACTGCGAGGTGGAAAGTCACCTCAAAGGAGGCCCTGCAGAGGATCAGCGAGTACTCTGAG
GCCGCCATCACCATCAGGGGCACCTACTTCCCTCCCGGCAAGGAGCCCAAGGAAGGAGAG
CGCAAGATCTACCTGGCCATCGAAA
INTRON 21 - 22 55,676,915 55,677,520 606
GTGCGTGCTGTTGCTTCTGCTTGAA..........CGTTTGTTTTCTAATGAATCTTCAG
22 EXON 22 55,677,521 55,677,594 1 0 74
GTGCCAACGAGCTGGCTGTGCAGAAAGCAAAGGCAGAGATCACCAGGCTCATAAAAGAGG
AACTGATCCGACTG
INTRON 22 - 23 55,677,595 55,678,783 1,189
GTGAGTGGAACCTGAAGGCCTCCCT..........TTCTGCCTTTTATTTTCCATCATAG
23 EXON 23 55,678,784 55,681,256 0 - 2,473
CAAAATTCATACCAACCAACCAACAAAGGACGATACAAAGTATTATAAACATCGGAGCCA
CTTTGTACCTTTGCTGTCTGTGACGTTTACAGTGTATTGTAAAGTAAGACTTTTAAAATT
CTGTCTTGCTTATTTTTTAAATACGAGAAACCAGTGTTTGTTCAAGAGGTCGTCTGTAAG
TACTACCCCATACCCATCCAAAACCATCTACATTAGACCTGTTTTCAGAATGTGATGTTC
TTCAATGTGAACCTTAGATACCAACACTTTAAATATCTGGAAGACATTGGAATTTTGTAC
TGAATGCTGTAATAAAGTCTGTCAGGCACTAAGGGCCACTGACCTGTCCTTTCAGTGGAA
TTGTGGTGTGCTCATCACCTAAGAAAGGTAAAAAGCTCTGGTCATAGCCTGCTGAGCTTA
CACCTCGAAGACTGGAGCATGTGAGCAGGACCCTAGAGTGCTGTGATGGAAGTTTACAAA
ACAGGCTCAGAGTTTTTATTTTAATTTTATCTGAAATGAGTAATAGACAAGCCCTGGCTT
ATAAAATTAAACATAAGTAGTATAATGGGATTTCTGCATTTCTTTTTTATTTCTTCCTAC
TTTTGAGAAAGTCACTGTGGGGCATGGGCTGGCCTTGAACTTGTGATCCTCCTCCAGTTG
TCTCTCCAGTGCTTGGTTTTAGCACACTCGGCTCTCCACGTCTTTCTACTGTGCTAGTGT
TACTATTTAAGGTTTTCTCTCGCCCCTGGTTTTGCCTAAGTGCTGACTTCTTTATTGACT
CCTTTAGAGAAAGTTATTATGACCAATACATACTCCATGTTAATCCTGTCCCTCAAGTGT
TTCTTTAGGCATTGATATTATGGTACATTCTCTACCATAATACTTCTAATCTGACTTTCC
TTCAGGATGATGGAGTTATGAATTTTCCCCTTTATTAAAACGAGGCAAGGTGGTGCATGC
CTGTAATCATAGCACCTAGTAGGCAAGGGTAGAAAGATGATGAATTTGAAGCCAGTTTGG
CCTTATATAATAAAGCCTCATGTGGAAAAACCGTGCAGGCAAGGCTGAGGATATAGTTCA
GTGGTAATGCACTTGCTTGAGTGTGCCCCAGGTCTAATACAAGAAAACAAAGCATTTTTG
TTACTATTGGTTGTTGGGCAGGCGAGGTGACTTGGTGGATGTGAGTCTTGCTTTCAAACC
TGATCACTCAGTTCAATATCTTGGATCCATATAGCAGAAAGTGCAAGTTGTTCTATGATA
CGCATTACTGTGCGTGTGTGCTCTCTCACGCACACACAGGTGTAAATAAATGTAGTAAAT
TGAAATAAAGAAATTACATCAAATACTGGTATTTACATTTCAGACCGCAGCATTTCTTAG
TAAAATTTGGTGCACAAAGAATTAAAAATTCCTCTTTAGAGCATTTGAGGTCTAATTCTG
AATAATTGGATTATCTAAAAAGACAGAACAGTTTTTTAGTCTCGATTTAAACCAGGTGTG
GTGGCACCCACCTGTAATCCAGCCTTTGGGAGGCAGAGGCAGGATGGTCCCTGAGTTCAA
GACCAGCCTTTTGTCCTCTGCATCTAGTTTTACATAATGAGTTTCAGGCCAGCCAGAGCT
ACAGTGAGAACCAGTCTTATAAAAAGAGAACAAGCAAATATATGTGTATATATTGTTGAT
TTAGAGGTTGATTTTAAGTCAGAGCATACTAGAGTTGTTAAATACTTTTAAGGCAAGGGC
AGTGACGCAGTGGTTAGGAGCATCTGCTGCTCTTTTTGAAGACCCAGGTTCAGATCTCAA
CACCCACATGGCAGCTTACAGTTGTCTGTAATTCCAGTGAATAAGTCTAAAGAACAATAA
ATAATAAATAAACCAGTGTAACATATTTAAAAGCCATAGTGACAGCCACCTATCCTACTT
GTTAAGTGTAAGGTTACTTGTACTAGAAAAGTAAGAACTACTTGGGAAATATTTTTAGAT
CTTCACATACCCAGTTACTTCACTTCAAGAAAAGAGCAATTACAGCAGGAGGAACTAGAA
CATCACACTGGAATCCCTGTCACCAGCACTTCTTCCGGCCTTGGTTTATTTATTGCGTCT
CATCGCCCAGGTGTAGCTTGTTACTTTCAGAGTACACAGCAGCCACACCGGTGCAGTGGT
GCTCCCGGAAACTCCACACCGGTGCGGTGGTGCTCCCGGAAACTCCATACTGGTGCAGTA
GTGCTCCCTCAACTCCCTGGCTCCCTGGAGATTCAGAAGTTACATCATATCACGTTTTCT
GTTTGTGTATCTAAGAAGCCCTGAGAGCATTTTGTCCTAAAATGGAATATTGCCCAGTAT
ATCTGTTAGTGTCAACACTGACTGATTTTTAAAGTTTTAATGATGTACAGAGTTTAATTT
GTTTTTTAATGCAATATCAATATTTCCTCAGGCTCTCTATAAATTCCTTACAGAATAAAG
TTGATTCAGTCGG
3' upstream sequence
CATTGTCTCAGATTATCTTTCCTTGAATGCTTTGTCTTTTGTTTTTTTCTCTAACCTTTT
TATTTGTGGACCACTAAGGGGAATATTAGTGTTGGTATATCTTTCTGCATTTCTTAACAG
TCTCACTGTGCAGCCCCAGCTGGCCTTGAACGTGCTTTGTAGACTAGGTTGGCACTGAAC
TCACAGAGATCTACATGTTTGTTTCTGTCTCCCAAGTGCAGGAGAGCATACATGGCGTGC
ATTTTTTTTTTTTTAAAGCAAAAAATTCTCACCGGGTGTGGTGGCACACACCTTTAGTCC
CAGCACTTGGGAGGCAGAGGCAGTCGAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGAC
AGCCAGGACTGCACAGAGACACACTGTCTCGAAAAACCAAAAAAAAAAAAGAAAAAGAAA
AGGAAAAAAAAAAAAGGAGTGATGGTGCATGCCTTTAATCCCAGCACTTGCAGGCAATGC
AGGTGAATTTTTGAATTTGAAGCCCACCTGATCTACAAAGTTCCAGGAAAGCCAGGGCTA
CACAGGAAAGGAAACCCTGCCTCAAAACAAAGCAAACAAGAAATCCTCTTTCACTTTTGG
TTATCAAATATATATATAGTCTTTTTAACCTGGTTGCCTTGTGTGAGCCTTGGGTCTGTT
CTTCATCATCCTAAGAAAAAGGGGGTACAGATATGATGAAATCACATCACCAAGCTCCCC
AGCAGCTCGCTCTGCGCACACACACTCCTTTACGTGATTCTGTGGGTAGCTGGCCTTGTT
TGAGTACACATTCTAAGTAGTGACCACAGCGCCTCTGTGACTTCTGAGTCTTTGGAGCGA
GCAGCAGTTTCTAGATCCCAAGTTTGTTTTGTTGACATCACGCACACAAACCAATGTAAG
GAATTCCCTAGAGTTGATTTTTGGCTGTTGTAAATGGAAGCCCAGTCTTGACTTGAGGTT
TATGAATGTGCCCAGCCTTCTGTAGGGTCTGCGGCTGCCT..........

Sequence Detail Report

Gene Symbol (Gene ID) Ddx46 (ENSMUSG00000021500)
Transcript ID ENSMUST00000172272
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1033 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information