|
|
5' upstream sequence
|
|
|
|
|
|
..........GGTGTTCTTCTAGAATGCATTGTCTGTTCCTTTTCTGTTTTTGAGTTTGT
TTTAAAATAGTTGCTCAGTGGTTCCCTTTATTAGGCCTAATTGGTTTTCATGAAAACATC
CTTTTCCTAGGAAGGCATAGACGCCTCCATTTTTTGCAGTCATGAAGTTAGTCTTTTGCA
GTCTTGGAGGACCTCTGTAGGTAGGGAATCTATTTGCTCTTGCTTTGCTTTGTTCTACCA
AGGCCAGGTTGTCTTTAATCTGATTGGTCATTTGAGGTGTTTGTAGGCATAGGAAATCCT
TTGGGAGGGCTTCTTTGTTCCAGTATAGGGGTAAGTTCGGTAAGTAAAACACTTAAAGGA
CAGGTCAAAATATGAATATAAAGATAATAAGCAGAAATGGAGTAATCCAGACAAAGAGCC
AGAGCAGGAGGGAGGCCCGTGCTTTTTGTCTGGTGCCTTTGGGCCCCATTTCCTGAGCGG
TTGAATGGATCATGTATTCCCCGCTGCCCCGAAAGCTTCCCAGTGTTAAGAACTATTATA
ATCCTTAGTGCAGTTTATCTCTGTTCTGTAGATTCTAAGTCTTCACATCTCATATTGAAG
AGTCTTTCCTCTTCAGTATGACGCTTCTTGTGTCGGAGACACATCACTACTATTAGTTGT
CAGGATCTGGCATACACATAAGTGACTCAGTACGGAGCATATAAGGAGACAGGAGCATTA
TTTAATGCAGATTAAGGCAAACAGACACACTCCCTGGGAGAGCCGCAGGCTGCATTAGGT
TCCTCGGTGGTCTGCAGCGAAGACCCTTTGCAAGGCTGACCTGGCTGATGGCACACTCCA
TAGCGCCAAAAAGGGCTGCGGGTTGCGCTAGAAAAGTAAGCTGTTGCTGCCGGCGCAGCC
CGCGCCGCGCGGCCTCCAGCCGGTTGGTGGCGCTCTGGAGAAGCAGCCGCTTCCTTCCGC
CCGCTCCTTCCTTCCGCACCCCGGCACCAGCACATCCTGTTTTCGTTGGC
|
|
1
|
EXON 1
|
55,635,027
|
55,635,195
|
- |
2 |
169
|
CACGCTCTGATGGCGGTCACTGCTGGAGCTCTGTCCATTTCGTAGGACCGGTCCTCGCTC GGTACCGTGAGAGCTTGCTGCCTCCCTCCTTTGTCCTCTTCATAGGCCTGCGCATCGTCC CCGAGGGCGCAGGCCTTCTGCTGGCCGGCAGCATGGGCCGGGAGTCTCG
|
|
|
INTRON 1 - 2
|
55,635,196
|
55,638,025
|
|
|
2,830
|
GTGAGTCCGCGGGCGAGCGGCTTCT..........GATCTTGGATTTGATACTGTTGTAG |
|
2
|
EXON 2
|
55,638,026
|
55,638,214
|
2 |
2 |
189
|
CCACTACCGAAAACGCTCAGCATCTCGAGGTCGTTCTGGAAGTCGATCGAGGAGTCGCTC ACCCTCTGACAAAAGAAGCAAACGTGGGGATGACAGACGCTCTCGGAGCAGAGACAGAGA CCGGAGGAGAGAGAGGTCTCGGAGTAGGGACAAGAGAAGATCTCGGTCAAGGGACAGGAA GCGCCTGAG
|
|
|
INTRON 2 - 3
|
55,638,215
|
55,639,790
|
|
|
1,576
|
GTAAGACGTCCAGTTCTGCAGAACC..........AATAAAAGAAAACTCTTCCCGTCAG |
|
3
|
EXON 3
|
55,639,791
|
55,639,934
|
2 |
2 |
144
|
GCGCTCCAGAAGTAGAGAGCGAGACAGAAGCCGAGAGCGGAGAAGATCTCGGAGCAGAGA TAGAAGGCGCTCAAGGAGTCGAAGCCGGGGCAGGCGGTCCCGGTCCTCCAGTCCTGGCAG CAAAACGAAGAAGACTGAGAACAG
|
|
|
INTRON 3 - 4
|
55,639,935
|
55,645,370
|
|
|
5,436
|
GTAACGCCGTCCTCAGACTGCGCCT..........TCTTACTCTCTCTATTCTTCGGTAG |
|
4
|
EXON 4
|
55,645,371
|
55,645,467
|
2 |
0 |
97
|
GTCTAGGTCCAAAGAGAAAGCAGAAGGTGGGGACAGCTCCAAGGAGAAGAAAAAGGACAA GGATGACAAGGAGGACGAGAAAGAGAAGGATGCTGGG
|
|
|
INTRON 4 - 5
|
55,645,468
|
55,647,626
|
|
|
2,159
|
GTAGGTCAGCTGGCCCCAGGGCCGC..........ATTTTCCCTCTTCCCTCCCCAAAAG |
|
5
|
EXON 5
|
55,647,627
|
55,647,792
|
0 |
1 |
166
|
AACTTTGACCAGAATAAACTGGAAGAAGAAATGAGAAAACGGAAAGAAAGAGTTGAAAAA TGGCGCGAAGAGCAGCGTAAGAAGGCTATGGAGAACATAGGAGAGCTGAAGAAGGAGATT GAGGAGATGAAGCAGGGGAAGAAGTGGAGCTTGGAGGACGACGACG
|
|
|
INTRON 5 - 6
|
55,647,793
|
55,650,414
|
|
|
2,622
|
GTAGGTCTGGGCTGCGGGTGGCGCC..........TGGGCGAGTGGCTCTGCTGTTTTAG |
|
6
|
EXON 6
|
55,650,415
|
55,650,566
|
1 |
0 |
152
|
ATGATGAAGATGATCCTGCCGAGGCTGAGAAGGAAGGGACTGAAATGGAGGACGAGGAGC TGGACCCATTAGACGCCTACATGGAAGAAGTGAAGGAAGAGGTAAAAAAGTTTAACATGA GGAGCGTGAAAGGCGGCGCAGGAAATGAGAAG
|
|
|
INTRON 6 - 7
|
55,650,567
|
55,652,043
|
|
|
1,477
|
GTACGTGGACAGCCGGCATTGCTCA..........TTTTAATCCTTCTTTTTTATTTTAG |
|
7
|
EXON 7
|
55,652,044
|
55,652,157
|
0 |
0 |
114
|
AAGTCTGGGCCAACAGTCACGAAAGTTGTCACTGTGGTGACCACCAAGAAAGCAGTAGTA GACGCGGATAAGAAGAAGGGGGAACTCATGGAGAATGACCAGGATGCCATGGAG
|
|
|
INTRON 7 - 8
|
55,652,158
|
55,652,912
|
|
|
755
|
GTGAGGCAGCCTGCCCGAGTCTGAC..........TACTTTTTGTTCCCCAAAATTCAAG |
|
8
|
EXON 8
|
55,652,913
|
55,653,078
|
0 |
1 |
166
|
TATTCCTCAGAGGAGGAGGAAGTTGACCTTCAAACGGCCCTCACAGGCTACCAGACAAAA CAGAGAAAACTTCTAGAGCCAGTTGATCATGGAAAAATTGAATATGAGCCATTCAGAAAA AACTTTTATGTTGAAGTTCCAGAATTAGCAAAAATGTCTCAAGAAG
|
|
|
INTRON 8 - 9
|
55,653,079
|
55,653,601
|
|
|
523
|
GTAAGATGCTGTGTGAGTTTTATTC..........TTCTAACTGGAGCTTTGTTTTCTAG |
|
9
|
EXON 9
|
55,653,602
|
55,653,722
|
1 |
2 |
121
|
AGGTGAATGTGTTTCGATTGGAAATGGAGGGCATTACAGTTAAAGGAAAAGGTTGCCCGA AACCAATTAAATCATGGGTCCAGTGTGGAATTTCCATGAAGATACTAAATTCCCTCAAAA A
|
|
|
INTRON 9 - 10
|
55,653,723
|
55,654,003
|
|
|
281
|
GTAAGTATTGGTGGTTATCTGCGTT..........TGCATTCTTTTTGTTTCTTTTTAAG |
|
10
|
EXON 10
|
55,654,004
|
55,654,179
|
2 |
1 |
176
|
GCATGGCTATGAAAAGCCAACACCAATCCAAACTCAAGCGATTCCTGCTATAATGTCTGG ACGAGATTTGATTGGCATTGCCAAGACAGGAAGTGGAAAAACCATTGCTTTTCTTTTGCC CATGTTTAGACACATCATGGATCAGAGGTCATTAGAAGAAGGAGAGGGACCAATAG
|
|
|
INTRON 10 - 11
|
55,654,180
|
55,655,008
|
|
|
829
|
GTACAAGTCTTCTCATTACATCATT..........GGCTTTGACATATTTCTCTTTTCAG |
|
11
|
EXON 11
|
55,655,009
|
55,655,130
|
1 |
0 |
122
|
CTGTCATCATGACTCCAACTCGAGAGCTGGCTTTACAAATCACTAAAGAATGTAAGAAGT TTTCGAAGACCTTGGGACTGAGAGTGGTCTGTGTGTATGGAGGGACAGGAATCAGCGAGC AG
|
|
|
INTRON 11 - 12
|
55,655,131
|
55,659,019
|
|
|
3,889
|
GTAGTTAGAATAAAGCACTCGTCTG..........ATACAATCTCATCCTGTCTCACTAG |
|
12
|
EXON 12
|
55,659,020
|
55,659,098
|
0 |
1 |
79
|
ATTGCTGAGCTGAAAAGAGGTGCTGAAATTATTGTTTGCACACCTGGTCGAATGATTGAC ATGTTAGCGGCTAACAGTG
|
|
|
INTRON 12 - 13
|
55,659,099
|
55,660,716
|
|
|
1,618
|
GTAAGTCACGGGTATTTTATTATTT..........TCTCTCTTTTCTCTTCTCACGTTAG |
|
13
|
EXON 13
|
55,660,717
|
55,660,799
|
1 |
0 |
83
|
GTCGGGTCACAAATCTTCGAAGAGTGACATATGTTGTTTTAGATGAAGCAGACAGAATGT TTGACATGGGTTTTGAACCACAG
|
|
|
INTRON 13 - 14
|
55,660,800
|
55,663,218
|
|
|
2,419
|
GTAATCATTCAATTTCTTTGTAAAT..........CGTATTTGTATATGTCATTTTTCAG |
|
14
|
EXON 14
|
55,663,219
|
55,663,383
|
0 |
0 |
165
|
GTCATGCGCATTGTGGATAACGTTCGTCCTGACCGACAGACAGTTATGTTTTCAGCCACT TTCCCTAGAGCTATGGAGGCTTTGGCCCGCAGGATCCTGAGCAAACCTATTGAAGTGCAG GTTGGAGGCAGGAGTGTGGTTTGCTCCGATGTGGAACAGCAGGTG
|
|
|
INTRON 14 - 15
|
55,663,384
|
55,663,778
|
|
|
395
|
GTAGGTACCATGTTCAGGAAGGTGC..........ACTTGCTACATTGTGGTATTTTCAG |
|
15
|
EXON 15
|
55,663,779
|
55,663,941
|
0 |
1 |
163
|
ATTGTGATTGAAGAAGAAAAGAAATTCTTGAAATTGCTGGAGCTTTTAGGCCATTATCAG GAGTCAGGATCTGTCATTATATTTGTGGATAAGCAGGAACACGCGGATGGTCTTCTGAAG GACTTGATGAGAGCATCGTACCCTTGCATGTCTCTTCACGGAG
|
|
|
INTRON 15 - 16
|
55,663,942
|
55,666,186
|
|
|
2,245
|
GTGACGATTACTTACCTACTAGCAT..........ATTTGTCTCTTTAATTTACTTGCAG |
|
16
|
EXON 16
|
55,666,187
|
55,666,380
|
1 |
0 |
194
|
GTATTGATCAATATGACAGGGACAGTATCATAAATGACTTTAAGAATGGAACCTGCAAGC TCCTCGTTGCCACATCTGTTGCAGCTCGTGGTCTCGATGTGAAACATCTAATTCTTGTAG TGAATTACAGCTGCCCCAATCATTATGAAGATTATGTGCACAGAGCTGGGCGGACTGGAA GAGCGGGCAACAAG
|
|
|
INTRON 16 - 17
|
55,666,381
|
55,669,711
|
|
|
3,331
|
GTAAGCCCTTACAACCGCGTCTGTG..........TCATTGTCCTTCTCATTGTCATCAG |
|
17
|
EXON 17
|
55,669,712
|
55,669,849
|
0 |
0 |
138
|
GGTTATGCCTACACCTTCATCACAGAGGATCAAGCTCGATATGCTGGTGACATCATTAAA GCTCTTGAATTGTCAGGGACCGCAGTGCCTCCTGACCTAGAAAAACTCTGGAGTGACTTC AAAGATCAACAGAAAGCT
|
|
|
INTRON 17 - 18
|
55,669,850
|
55,670,203
|
|
|
354
|
GTGAGTTTTAAACTTTCTTTGGAGG..........ACTTTGCTAACTTTTTTCTTAAAAG |
|
18
|
EXON 18
|
55,670,204
|
55,670,353
|
0 |
0 |
150
|
GAAGGAAAAATAATTAAAAAGAGTAGTGGCTTCTCTGGCAAGGGATTCAAGTTTGATGAA ACAGAACAGGCTTTAGCCAATGAGAGGAAAAAGCTGCAGAAAGCTGCTCTTGGCCTGCAA GATTCTGATGACGAGGATGCTGCAGTTGAT
|
|
|
INTRON 18 - 19
|
55,670,354
|
55,673,940
|
|
|
3,587
|
GTAAGTATTGAGTCTGCACGTGCGC..........GATTTGTTTTTCTCTCCTGTCCTAG |
|
19
|
EXON 19
|
55,673,941
|
55,674,117
|
0 |
0 |
177
|
ATTGATGAACAGATTGAAAGTATGTTTAATTCAAAGAAGAGAGTAAAGGACATGGCTGCA CCCGGCACATCCAGCGTGCCCGCACCCACTGCAGGCAATGCTGAGAAGCTAGAAATCGCC AAGAGACTGGCTCTCAGAATCAATGCTCAGAAGAACCTGGGCATCGAGTCTCAGGTA
|
|
|
INTRON 19 - 20
|
55,674,118
|
55,675,895
|
|
|
1,778
|
TTAAGTAATTTGTTCCGAGCCATTG..........AACTGGAGCTCTTCCTTAACTGTAG |
|
20
|
EXON 20
|
55,675,896
|
55,676,114
|
0 |
0 |
219
|
GATGTGATGCAGCAGGCCACCAACGCCATCCTCAGAGGTGGCACTATCCTGGCTCCCACT GTGTCTGCGAAAACCATTGCAGAGCAGCTTGCTGAGAAGATCAATGCCAAGCTCAACTAC GTGCCTTTGGAGAAGCAGGAGGAAGAGAGACAGGAGGGTGGGCAGAGCGAGTCTTTCAAG AGATACGAGGAAGAATTAGAAATTAATGACTTCCCACAG
|
|
|
INTRON 20 - 21
|
55,676,115
|
55,676,769
|
|
|
655
|
GCAAGTGACAGATTGAAAGGTTCTC..........GTGACTCCCCAACCCTTTCTTTCAG |
|
21
|
EXON 21
|
55,676,770
|
55,676,914
|
0 |
1 |
145
|
ACTGCGAGGTGGAAAGTCACCTCAAAGGAGGCCCTGCAGAGGATCAGCGAGTACTCTGAG GCCGCCATCACCATCAGGGGCACCTACTTCCCTCCCGGCAAGGAGCCCAAGGAAGGAGAG CGCAAGATCTACCTGGCCATCGAAA
|
|
|
INTRON 21 - 22
|
55,676,915
|
55,677,520
|
|
|
606
|
GTGCGTGCTGTTGCTTCTGCTTGAA..........CGTTTGTTTTCTAATGAATCTTCAG |
|
22
|
EXON 22
|
55,677,521
|
55,677,594
|
1 |
0 |
74
|
GTGCCAACGAGCTGGCTGTGCAGAAAGCAAAGGCAGAGATCACCAGGCTCATAAAAGAGG AACTGATCCGACTG
|
|
|
INTRON 22 - 23
|
55,677,595
|
55,678,783
|
|
|
1,189
|
GTGAGTGGAACCTGAAGGCCTCCCT..........TTCTGCCTTTTATTTTCCATCATAG |
|
23
|
EXON 23
|
55,678,784
|
55,681,256
|
0 |
- |
2,473
|
CAAAATTCATACCAACCAACCAACAAAGGACGATACAAAGTATTATAAACATCGGAGCCA CTTTGTACCTTTGCTGTCTGTGACGTTTACAGTGTATTGTAAAGTAAGACTTTTAAAATT CTGTCTTGCTTATTTTTTAAATACGAGAAACCAGTGTTTGTTCAAGAGGTCGTCTGTAAG TACTACCCCATACCCATCCAAAACCATCTACATTAGACCTGTTTTCAGAATGTGATGTTC TTCAATGTGAACCTTAGATACCAACACTTTAAATATCTGGAAGACATTGGAATTTTGTAC TGAATGCTGTAATAAAGTCTGTCAGGCACTAAGGGCCACTGACCTGTCCTTTCAGTGGAA TTGTGGTGTGCTCATCACCTAAGAAAGGTAAAAAGCTCTGGTCATAGCCTGCTGAGCTTA CACCTCGAAGACTGGAGCATGTGAGCAGGACCCTAGAGTGCTGTGATGGAAGTTTACAAA ACAGGCTCAGAGTTTTTATTTTAATTTTATCTGAAATGAGTAATAGACAAGCCCTGGCTT ATAAAATTAAACATAAGTAGTATAATGGGATTTCTGCATTTCTTTTTTATTTCTTCCTAC TTTTGAGAAAGTCACTGTGGGGCATGGGCTGGCCTTGAACTTGTGATCCTCCTCCAGTTG TCTCTCCAGTGCTTGGTTTTAGCACACTCGGCTCTCCACGTCTTTCTACTGTGCTAGTGT TACTATTTAAGGTTTTCTCTCGCCCCTGGTTTTGCCTAAGTGCTGACTTCTTTATTGACT CCTTTAGAGAAAGTTATTATGACCAATACATACTCCATGTTAATCCTGTCCCTCAAGTGT TTCTTTAGGCATTGATATTATGGTACATTCTCTACCATAATACTTCTAATCTGACTTTCC TTCAGGATGATGGAGTTATGAATTTTCCCCTTTATTAAAACGAGGCAAGGTGGTGCATGC CTGTAATCATAGCACCTAGTAGGCAAGGGTAGAAAGATGATGAATTTGAAGCCAGTTTGG CCTTATATAATAAAGCCTCATGTGGAAAAACCGTGCAGGCAAGGCTGAGGATATAGTTCA GTGGTAATGCACTTGCTTGAGTGTGCCCCAGGTCTAATACAAGAAAACAAAGCATTTTTG TTACTATTGGTTGTTGGGCAGGCGAGGTGACTTGGTGGATGTGAGTCTTGCTTTCAAACC TGATCACTCAGTTCAATATCTTGGATCCATATAGCAGAAAGTGCAAGTTGTTCTATGATA CGCATTACTGTGCGTGTGTGCTCTCTCACGCACACACAGGTGTAAATAAATGTAGTAAAT TGAAATAAAGAAATTACATCAAATACTGGTATTTACATTTCAGACCGCAGCATTTCTTAG TAAAATTTGGTGCACAAAGAATTAAAAATTCCTCTTTAGAGCATTTGAGGTCTAATTCTG AATAATTGGATTATCTAAAAAGACAGAACAGTTTTTTAGTCTCGATTTAAACCAGGTGTG GTGGCACCCACCTGTAATCCAGCCTTTGGGAGGCAGAGGCAGGATGGTCCCTGAGTTCAA GACCAGCCTTTTGTCCTCTGCATCTAGTTTTACATAATGAGTTTCAGGCCAGCCAGAGCT ACAGTGAGAACCAGTCTTATAAAAAGAGAACAAGCAAATATATGTGTATATATTGTTGAT TTAGAGGTTGATTTTAAGTCAGAGCATACTAGAGTTGTTAAATACTTTTAAGGCAAGGGC AGTGACGCAGTGGTTAGGAGCATCTGCTGCTCTTTTTGAAGACCCAGGTTCAGATCTCAA CACCCACATGGCAGCTTACAGTTGTCTGTAATTCCAGTGAATAAGTCTAAAGAACAATAA ATAATAAATAAACCAGTGTAACATATTTAAAAGCCATAGTGACAGCCACCTATCCTACTT GTTAAGTGTAAGGTTACTTGTACTAGAAAAGTAAGAACTACTTGGGAAATATTTTTAGAT CTTCACATACCCAGTTACTTCACTTCAAGAAAAGAGCAATTACAGCAGGAGGAACTAGAA CATCACACTGGAATCCCTGTCACCAGCACTTCTTCCGGCCTTGGTTTATTTATTGCGTCT CATCGCCCAGGTGTAGCTTGTTACTTTCAGAGTACACAGCAGCCACACCGGTGCAGTGGT GCTCCCGGAAACTCCACACCGGTGCGGTGGTGCTCCCGGAAACTCCATACTGGTGCAGTA GTGCTCCCTCAACTCCCTGGCTCCCTGGAGATTCAGAAGTTACATCATATCACGTTTTCT GTTTGTGTATCTAAGAAGCCCTGAGAGCATTTTGTCCTAAAATGGAATATTGCCCAGTAT ATCTGTTAGTGTCAACACTGACTGATTTTTAAAGTTTTAATGATGTACAGAGTTTAATTT GTTTTTTAATGCAATATCAATATTTCCTCAGGCTCTCTATAAATTCCTTACAGAATAAAG TTGATTCAGTCGG
|
|
|
3' upstream sequence
|
|
|
|
|
|
CATTGTCTCAGATTATCTTTCCTTGAATGCTTTGTCTTTTGTTTTTTTCTCTAACCTTTT
TATTTGTGGACCACTAAGGGGAATATTAGTGTTGGTATATCTTTCTGCATTTCTTAACAG
TCTCACTGTGCAGCCCCAGCTGGCCTTGAACGTGCTTTGTAGACTAGGTTGGCACTGAAC
TCACAGAGATCTACATGTTTGTTTCTGTCTCCCAAGTGCAGGAGAGCATACATGGCGTGC
ATTTTTTTTTTTTTAAAGCAAAAAATTCTCACCGGGTGTGGTGGCACACACCTTTAGTCC
CAGCACTTGGGAGGCAGAGGCAGTCGAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGAC
AGCCAGGACTGCACAGAGACACACTGTCTCGAAAAACCAAAAAAAAAAAAGAAAAAGAAA
AGGAAAAAAAAAAAAGGAGTGATGGTGCATGCCTTTAATCCCAGCACTTGCAGGCAATGC
AGGTGAATTTTTGAATTTGAAGCCCACCTGATCTACAAAGTTCCAGGAAAGCCAGGGCTA
CACAGGAAAGGAAACCCTGCCTCAAAACAAAGCAAACAAGAAATCCTCTTTCACTTTTGG
TTATCAAATATATATATAGTCTTTTTAACCTGGTTGCCTTGTGTGAGCCTTGGGTCTGTT
CTTCATCATCCTAAGAAAAAGGGGGTACAGATATGATGAAATCACATCACCAAGCTCCCC
AGCAGCTCGCTCTGCGCACACACACTCCTTTACGTGATTCTGTGGGTAGCTGGCCTTGTT
TGAGTACACATTCTAAGTAGTGACCACAGCGCCTCTGTGACTTCTGAGTCTTTGGAGCGA
GCAGCAGTTTCTAGATCCCAAGTTTGTTTTGTTGACATCACGCACACAAACCAATGTAAG
GAATTCCCTAGAGTTGATTTTTGGCTGTTGTAAATGGAAGCCCAGTCTTGACTTGAGGTT
TATGAATGTGCCCAGCCTTCTGTAGGGTCTGCGGCTGCCT..........
|