MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Jarid2 (ENSMUSG00000038518)

Cross Reference

EMBL	AC166074, AC170597
GO	GO:0000122, GO:0001889, GO:0003677, ...show all
goslim_goa	GO:0002376, GO:0003674, GO:0003677, ...show all
MGI_trans_name	Jarid2-007
OTTP	OTTMUSP00000054204
OTTT	OTTMUST00000096892
UniParc	UPI00021CF768
Uniprot/SPTREMBL	G3UZW3
Vega_transcript	Jarid2-007, OTTMUST00000096892
Vega_translation	214400, OTTMUSP00000054204

Definition

protein_id:ENSMUSP00000134658
translation:

MMPPKCPLLATMLVLQILKKGRRGKGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATT
NNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRAD
SRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGT
NSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKT
ESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLE
EAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRA
AAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLR
PSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRW
GPNVQRLACIKKHLRSQGITMDELPLI

Chromosome

Length
Position(start - end)

54,911
44,848,346 - 44,903,258

Orient to Chromosome

plus

Link

Location : (13:44848346-44903258)
/

Detail Map

name	Jarid2 (ENSMUSG00000038518)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Jarid2 note : jumonji, AT rich interactive domain 2 [Source:MGI Symbol;Acc:MGI:104813]

name	Gm22213 (ENSMUSG00000088189)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm22213 note : predicted gene, 22213 [Source:MGI Symbol;Acc:MGI:5451990]

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000174068

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000172830

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173704

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000044608

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173367

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173246

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000174086

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000172977

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173906

name	Jarid2 (ENSMUSG00000038518)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173003

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Jarid2-011 Vega_transcript:OTTMUST00000096888 Uniprot/SPTREMBL:G3UZQ8 EMBL:AC166074 EMBL:AC170597 GO:GO:0000122 GO:GO:0001889 GO:GO:0003677 GO:GO:0005515 GO:GO:0005634 GO:GO:0008285 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 MGI_trans_name:Jarid2-011 Vega_translation:214396 Vega_translation:OTTMUSP00000054200 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 OTTP:OTTMUSP00000054200 OTTT:OTTMUST00000096888 UniParc:UPI00021CF766
definition	note : transcript_id=ENSMUST00000174068 protein_id : ENSMUSP00000134593 translation : MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKAVNGLLGNAQAKALGPASEQSEN

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Jarid2-015 Vega_transcript:OTTMUST00000096889 Uniprot/SPTREMBL:G3UXE0 EMBL:AC166074 EMBL:AC170597 GO:GO:0000122 GO:GO:0001889 GO:GO:0003677 GO:GO:0005515 GO:GO:0005634 GO:GO:0008285 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 MGI_trans_name:Jarid2-015 Vega_translation:214397 Vega_translation:OTTMUSP00000054201 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 OTTP:OTTMUSP00000054201 OTTT:OTTMUST00000096889 UniParc:UPI00021CF767
definition	note : transcript_id=ENSMUST00000172830 protein_id : ENSMUSP00000133653 translation : MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKA

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS36646.1 Uniprot/SWISSPROT:Q62315 RefSeq_peptide:NP_001191973 RefSeq_mRNA:NM_001205044.1 RefSeq_peptide_predicted:XP_006516921.1 Vega_transcript:Jarid2-003 Vega_transcript:OTTMUST00000096890 UCSC:uc007qgr.2 Fantom:B130048B16 Fantom:C530046H17 Fantom:M421020G19 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134 EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 EMBL:CH466546 EMBL:D31967 GO:GO:0000122 GO:GO:0000977 GO:GO:0001227 GO:GO:0001889 GO:GO:0003677 GO:GO:0003682 GO:GO:0005515 GO:GO:0005634 GO:GO:0006351 GO:GO:0008285 GO:GO:0016568 GO:GO:0031061 GO:GO:0035097 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 GO:GO:0048863 GO:GO:0051574 MGI_trans_name:Jarid2-003 PDB:2RQ5 Vega_translation:214398 Vega_translation:OTTMUSP00000054202 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0030154 goslim_goa:GO:0034641 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH03374.1 protein_id:AAH52444.1 protein_id:AAH60695.1 protein_id:BAA06736.1 protein_id:BAC32264.1 protein_id:BAE27780.1 protein_id:BAE37641.1 protein_id:EDL41007.1 OTTP:OTTMUSP00000054202 OTTT:OTTMUST00000096890 Reactome:R-MMU-212165 Reactome:R-MMU-212300 Reactome:R-MMU-74160 UniParc:UPI000000406B
definition	note : transcript_id=ENSMUST00000173704 protein_id : ENSMUSP00000134675 translation : MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKAVNGLLGNAQAKALGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATTNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRADSRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGTNSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRAAAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTESDHHKFHSLPRFEPKNGLVHGVTPRNGFRSKLKEVGRAPLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRLLFEAGLHSSARYGSHDGNSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKHGGIENCLNKPTPKRGPRKRATVDVPPSRLPSS

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS36646.1 Uniprot/SWISSPROT:Q62315 RefSeq_peptide:NP_068678 RefSeq_mRNA:NM_021878.3 RefSeq_peptide_predicted:XP_006516921.1 Vega_transcript:Jarid2-002 Vega_transcript:OTTMUST00000096891 UCSC:uc007qgs.2 Fantom:B130048B16 Fantom:C530046H17 Fantom:M421020G19 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134 EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 EMBL:CH466546 EMBL:D31967 GO:GO:0000122 GO:GO:0000977 GO:GO:0001227 GO:GO:0001889 GO:GO:0003677 GO:GO:0003682 GO:GO:0005515 GO:GO:0005634 GO:GO:0006351 GO:GO:0008285 GO:GO:0016568 GO:GO:0031061 GO:GO:0035097 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 GO:GO:0048863 GO:GO:0051574 MGI_trans_name:Jarid2-002 PDB:2RQ5 Vega_translation:214399 Vega_translation:OTTMUSP00000054203 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0030154 goslim_goa:GO:0034641 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH03374.1 protein_id:AAH52444.1 protein_id:AAH60695.1 protein_id:BAA06736.1 protein_id:BAC32264.1 protein_id:BAE27780.1 protein_id:BAE37641.1 protein_id:EDL41007.1 OTTP:OTTMUSP00000054203 OTTT:OTTMUST00000096891 Reactome:R-MMU-212165 Reactome:R-MMU-212300 Reactome:R-MMU-74160 UniParc:UPI000000406B
definition	note : transcript_id=ENSMUST00000044608 protein_id : ENSMUSP00000037774 translation : MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKAVNGLLGNAQAKALGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATTNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRADSRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGTNSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRAAAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTESDHHKFHSLPRFEPKNGLVHGVTPRNGFRSKLKEVGRAPLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRLLFEAGLHSSARYGSHDGNSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKHGGIENCLNKPTPKRGPRKRATVDVPPSRLPSS

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Jarid2-007 Vega_transcript:OTTMUST00000096892 Uniprot/SPTREMBL:G3UZW3 EMBL:AC166074 EMBL:AC170597 GO:GO:0000122 GO:GO:0001889 GO:GO:0003677 GO:GO:0005515 GO:GO:0005634 GO:GO:0008285 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 MGI_trans_name:Jarid2-007 Vega_translation:214400 Vega_translation:OTTMUSP00000054204 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 OTTP:OTTMUSP00000054204 OTTT:OTTMUST00000096892 UniParc:UPI00021CF768
definition	note : transcript_id=ENSMUST00000173367 protein_id : ENSMUSP00000134658 translation : MMPPKCPLLATMLVLQILKKGRRGKGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATTNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRADSRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGTNSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRAAAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLI

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS36646.1 Uniprot/SWISSPROT:Q62315 RefSeq_peptide:NP_001191972 RefSeq_mRNA:NM_001205043.1 RefSeq_mRNA_predicted:XM_006516855.2 RefSeq_mRNA_predicted:XM_006516856.2 RefSeq_peptide_predicted:XP_006516918.1 RefSeq_peptide_predicted:XP_006516919.1 RefSeq_peptide_predicted:XP_006516921.1 Vega_transcript:Jarid2-001 Vega_transcript:OTTMUST00000096894 UCSC:uc007qgu.2 Fantom:B130048B16 Fantom:C530046H17 Fantom:M421020G19 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134 EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 EMBL:CH466546 EMBL:D31967 GO:GO:0000122 GO:GO:0000977 GO:GO:0001227 GO:GO:0001889 GO:GO:0003677 GO:GO:0003682 GO:GO:0005515 GO:GO:0005634 GO:GO:0005634 GO:GO:0006351 GO:GO:0008285 GO:GO:0016568 GO:GO:0031061 GO:GO:0035097 GO:GO:0035098 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 GO:GO:0048863 GO:GO:0051574 MGI_trans_name:Jarid2-001 PDB:2RQ5 Vega_translation:214401 Vega_translation:OTTMUSP00000054205 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0030154 goslim_goa:GO:0034641 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH03374.1 protein_id:AAH52444.1 protein_id:AAH60695.1 protein_id:BAA06736.1 protein_id:BAC32264.1 protein_id:BAE27780.1 protein_id:BAE37641.1 protein_id:EDL41007.1 OTTP:OTTMUSP00000054205 OTTT:OTTMUST00000096894 Reactome:R-MMU-212165 Reactome:R-MMU-212300 Reactome:R-MMU-74160 UniParc:UPI000000406B
definition	note : transcript_id=ENSMUST00000173246 protein_id : ENSMUSP00000134205 translation : MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKAVNGLLGNAQAKALGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATTNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRADSRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGTNSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRAAAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTESDHHKFHSLPRFEPKNGLVHGVTPRNGFRSKLKEVGRAPLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRLLFEAGLHSSARYGSHDGNSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKHGGIENCLNKPTPKRGPRKRATVDVPPSRLPSS

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Jarid2-013 Vega_transcript:OTTMUST00000096895 Uniprot/SPTREMBL:G3UXT1 EMBL:AC166074 EMBL:AC170597 GO:GO:0000122 GO:GO:0001889 GO:GO:0003677 GO:GO:0005515 GO:GO:0005634 GO:GO:0008285 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 MGI_trans_name:Jarid2-013 Vega_translation:214402 Vega_translation:OTTMUSP00000054206 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 OTTP:OTTMUSP00000054206 OTTT:OTTMUST00000096895 UniParc:UPI00021CF769
definition	note : transcript_id=ENSMUST00000174086 protein_id : ENSMUSP00000133812 translation : MSKERPKRNIIQKKYDDSDGIPW

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Jarid2-014 Vega_transcript:OTTMUST00000096898 Uniprot/SPTREMBL:G3UYY7 UCSC:uc007qgt.2 EMBL:AC166074 EMBL:AC170597 GO:GO:0000122 GO:GO:0001889 GO:GO:0003677 GO:GO:0005515 GO:GO:0005634 GO:GO:0008285 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 MGI_trans_name:Jarid2-014 Vega_translation:214403 Vega_translation:OTTMUSP00000054207 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 OTTP:OTTMUSP00000054207 OTTT:OTTMUST00000096898 UniParc:UPI00021CF76A
definition	note : transcript_id=ENSMUST00000172977 protein_id : ENSMUSP00000134276 translation : MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKAVNGPGCKHKGSLLNLSRIVPAQLQ

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Jarid2-006 Vega_transcript:OTTMUST00000096901 Uniprot/SPTREMBL:G3UZT8 UCSC:uc007qgv.1 EMBL:AC166074 EMBL:AC170597 GO:GO:0000122 GO:GO:0001889 GO:GO:0003677 GO:GO:0005515 GO:GO:0005634 GO:GO:0008285 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 MGI_trans_name:Jarid2-006 Vega_translation:214404 Vega_translation:OTTMUSP00000054208 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 OTTP:OTTMUSP00000054208 OTTT:OTTMUST00000096901 UniParc:UPI00021CF76B
definition	note : transcript_id=ENSMUST00000173906 protein_id : ENSMUSP00000134630 translation : MAAPRVCQVQFLVAYLEEPGIEGLLGNAQAKALGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATTNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRADSRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGTNSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRAAAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTESDHHKFHSLPRFEPKNGLVHGVTPRNGFRSKLKEVGRAPLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAE

name	Jarid2 (ENSMUSG00000038518) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Jarid2-008 Vega_transcript:OTTMUST00000096902 Uniprot/SPTREMBL:G3UZ12 EMBL:AC166074 EMBL:AC170597 GO:GO:0000122 GO:GO:0001889 GO:GO:0003677 GO:GO:0005515 GO:GO:0005634 GO:GO:0008285 GO:GO:0035098 GO:GO:0042127 GO:GO:0045892 GO:GO:0048536 GO:GO:0048538 MGI_trans_name:Jarid2-008 Vega_translation:214405 Vega_translation:OTTMUSP00000054209 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 OTTP:OTTMUSP00000054209 OTTT:OTTMUST00000096902 UniParc:UPI00021CF76C
definition	note : transcript_id=ENSMUST00000173003 protein_id : ENSMUSP00000134302 translation : MAAPRVCQVQFLVAYLEEPGIEGPGCKHKGSLLNLSRIVPAQLQ

name
type	STS
link
xref	UniSTS_NUM:162833 UniSTS:RH126121 UniSTS:C77215
definition	note : map_weight=1 standard_name : RH126121

name
type	STS
link
xref	UniSTS_NUM:165867 UniSTS:AU021389 WI_MRC-RH:361447
definition	note : map_weight=1 standard_name : AU021389

name
type	STS
link
xref	UniSTS_NUM:126994 UniSTS:D13Mit179
definition	note : map_weight=1 standard_name : D13Mit179

name
type	STS
link
xref	UniSTS_NUM:162881 UniSTS:RH126171 UniSTS:C77492 MGI:D13Ertd42e
definition	note : map_weight=1 standard_name : RH126171

name
type	misc_feature
link
xref
definition	note : contig AC170597.2 15921..223662(1)

name
type	misc_feature
link
xref
definition	note : contig AC166074.3 23390..224712(1)

name	Jarid2 (ENSMUSG00000038518)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000096887 Vega_transcript:OTTMUST00000096887 MGI_trans_name:Jarid2-009 OTTT:OTTMUST00000096887
definition	note : processed_transcript note : transcript_id=ENSMUST00000174394

name	Jarid2 (ENSMUSG00000038518)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000096893 Vega_transcript:OTTMUST00000096893 MGI_trans_name:Jarid2-016 OTTT:OTTMUST00000096893
definition	note : processed_transcript note : transcript_id=ENSMUST00000172708

name	Jarid2 (ENSMUSG00000038518)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000096896 Vega_transcript:OTTMUST00000096896 MGI_trans_name:Jarid2-004 OTTT:OTTMUST00000096896
definition	note : retained_intron note : transcript_id=ENSMUST00000174557

name	Jarid2 (ENSMUSG00000038518)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000096897 Vega_transcript:OTTMUST00000096897 MGI_trans_name:Jarid2-005 OTTT:OTTMUST00000096897
definition	note : retained_intron note : transcript_id=ENSMUST00000174683

name	Jarid2 (ENSMUSG00000038518)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000096899 Vega_transcript:OTTMUST00000096899 MGI_trans_name:Jarid2-010 OTTT:OTTMUST00000096899
definition	note : processed_transcript note : transcript_id=ENSMUST00000172924

name	Jarid2 (ENSMUSG00000038518)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000096900 Vega_transcript:OTTMUST00000096900 MGI_trans_name:Jarid2-012 OTTT:OTTMUST00000096900
definition	note : processed_transcript note : transcript_id=ENSMUST00000172581

name	Gm22213 (ENSMUSG00000088189)
type	misc_RNA
link	VEGA Ensembl MGI
xref	MGI_trans_name:Gm22213-201
definition	note : snoRNA note : transcript_id=ENSMUST00000157564

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Jarid2 (ENSMUSG00000038518)
Transcript ID	ENSMUST00000173367

Reports
substitution
cSNPs	0
Insertion	138
Deletion	152
SNPs	-1kb 44726100(c.-122246C>T), 44726212(c.-122134G>A), 44726577(c.-121769T>C), 44727028(c.-121318C>T), 44727083(c.-121263G>T), 44727103(c.-121243T>C), 44727120(c.-121226G>A), 44727188(c.-121158T>C), 44727246(c.-121100T>C), 44727269(c.-121077C>T), 44727517(c.-120829T>C), 44727997(c.-120349A>C), 44728416(c.-119930C>G), 44728470(c.-119876T>C), 44728739(c.-119607C>A), 44728796(c.-119550G>A), 44729167(c.-119179G>A), 44729259(c.-119087A>G), 44729316(c.-119030G>A), 44729422(c.-118924T>C), 44730166(c.-118180A>G), 5'UTR 44848309(c.-37C>T), CDS 3'UTR INTRON 44731772(c.-203+884A>C), 44732555(c.-203+1667C>T), 44732772(c.-203+1884A>G), 44732948(c.-203+2060A>T), 44733099(c.-203+2211A>C), 44733533(c.-203+2645C>T), 44733540(c.-203+2652T>C), 44733749(c.-203+2861T>G), 44733989(c.-203+3101A>T), 44734014(c.-203+3126T>C), 44734024(c.-203+3136C>A), 44734265(c.-203+3377T>C), 44734357(c.-203+3469G>A), 44734373(c.-203+3485T>C), 44734680(c.-203+3792G>A), 44734736(c.-203+3848A>G), 44734770(c.-203+3882C>T), 44735313(c.-203+4425C>T), 44735647(c.-203+4759T>C), 44735768(c.-203+4880A>C), 44735910(c.-203+5022T>A), 44736395(c.-203+5507A>G), 44736696(c.-203+5808T>G), 44737451(c.-203+6563T>C), 44737780(c.-203+6892C>T), 44737997(c.-203+7109C>A), 44738057(c.-203+7169A>T), 44738693(c.-203+7805C>T), 44738698(c.-203+7810G>A), 44738706(c.-203+7818G>A), 44738714(c.-203+7826G>A), 44739063(c.-203+8175C>G), 44739095(c.-203+8207A>G), 44739266(c.-203+8378G>A), 44741657(c.-203+10769G>A), 44741658(c.-203+10770C>T), 44741830(c.-203+10942C>T), 44741896(c.-203+11008A>G), 44741960(c.-203+11072A>G), 44742009(c.-203+11121G>A), 44742145(c.-203+11257T>A), 44742150(c.-203+11262A>T), 44742355(c.-203+11467A>G), 44742360(c.-203+11472C>T), 44742376(c.-203+11488G>A), 44742503(c.-203+11615G>A), 44742577(c.-203+11689T>G), 44742643(c.-203+11755C>T), 44742663(c.-203+11775G>T), 44742664(c.-203+11776T>C), 44742737(c.-203+11849A>C), 44742884(c.-203+11996C>G), 44743238(c.-203+12350T>C), 44743309(c.-203+12421A>T), 44743599(c.-203+12711T>C), 44743720(c.-203+12832T>C), 44743914(c.-203+13026G>A), 44744243(c.-203+13355T>A), 44744818(c.-203+13930G>A), 44744948(c.-203+14060C>T), 44744998(c.-203+14110T>G), 44745666(c.-203+14778A>G), 44745771(c.-203+14883T>C), 44745879(c.-203+14991T>A), 44745953(c.-203+15065T>C), 44746032(c.-203+15144T>C), 44746047(c.-203+15159G>C), 44746624(c.-203+15736C>T), 44746669(c.-203+15781T>G), 44746784(c.-203+15896T>G), 44746969(c.-203+16081A>C), 44747229(c.-203+16341A>G), 44747339(c.-203+16451G>A), 44747379(c.-203+16491C>G), 44748137(c.-203+17249G>C), 44748283(c.-203+17395T>G), 44748400(c.-203+17512G>C), 44748561(c.-203+17673C>T), 44748828(c.-203+17940C>T), 44748923(c.-203+18035A>G), 44749021(c.-203+18133C>T), 44749069(c.-203+18181T>A), 44749215(c.-203+18327C>T), 44749257(c.-203+18369A>G), 44749294(c.-203+18406G>T), 44749330(c.-203+18442C>T), 44749332(c.-203+18444T>A), 44749340(c.-203+18452C>T), 44749829(c.-203+18941G>A), 44750300(c.-203+19412A>G), 44750343(c.-203+19455T>A), 44750344(c.-203+19456C>G), 44750655(c.-203+19767G>C), 44750758(c.-203+19870G>A), 44750773(c.-203+19885C>T), 44751370(c.-203+20482T>C), 44752230(c.-203+21342T>C), 44752286(c.-203+21398T>C), 44752337(c.-203+21449A>T), 44752707(c.-203+21819T>G), 44752829(c.-203+21941G>T), 44753076(c.-203+22188C>A), 44753175(c.-203+22287C>G), 44753204(c.-203+22316A>C), 44753206(c.-203+22318A>C), 44753323(c.-203+22435G>T), 44753691(c.-203+22803A>G), 44753732(c.-203+22844T>C), 44753737(c.-203+22849T>A), 44753879(c.-203+22991A>T), 44754275(c.-203+23387A>G), 44754402(c.-203+23514A>G), 44754451(c.-203+23563G>A), 44754783(c.-203+23895G>A), 44754861(c.-203+23973T>C), 44754987(c.-203+24099C>T), 44755020(c.-203+24132A>G), 44755053(c.-203+24165G>A), 44755120(c.-203+24232C>T), 44755413(c.-203+24525T>C), 44755474(c.-203+24586A>G), 44755583(c.-203+24695T>G), 44755663(c.-203+24775T>A), 44756056(c.-203+25168A>T), 44756275(c.-203+25387T>C), 44756331(c.-203+25443C>T), 44756487(c.-203+25599G>T), 44756637(c.-203+25749C>A), 44756734(c.-203+25846G>C), 44757092(c.-203+26204A>T), 44757167(c.-203+26279A>C), 44757225(c.-203+26337C>A), 44757276(c.-203+26388A>T), 44757578(c.-203+26690T>C), 44757639(c.-203+26751T>C), 44758146(c.-203+27258C>T), 44758203(c.-203+27315T>C), 44758310(c.-203+27422T>C), 44758370(c.-203+27482G>A), 44758522(c.-203+27634A>T), 44758547(c.-203+27659T>C), 44758658(c.-203+27770C>T), 44758766(c.-203+27878T>C), 44758878(c.-203+27990T>C), 44759117(c.-203+28229A>C), 44759220(c.-203+28332C>T), 44759721(c.-203+28833G>A), 44759748(c.-203+28860T>C), 44759776(c.-203+28888A>G), 44759795(c.-203+28907G>A), 44759848(c.-203+28960T>C), 44759919(c.-203+29031T>G), 44760059(c.-203+29171A>G), 44760341(c.-203+29453G>A), 44760483(c.-203+29595C>T), 44760554(c.-203+29666G>T), 44760579(c.-203+29691G>C), 44760644(c.-203+29756G>T), 44760661(c.-203+29773G>A), 44760914(c.-203+30026A>T), 44760942(c.-203+30054A>G), 44760949(c.-203+30061T>G), 44760996(c.-203+30108G>C), 44760997(c.-203+30109A>T), 44761015(c.-203+30127G>A), 44761258(c.-203+30370A>G), 44761394(c.-203+30506C>T), 44761573(c.-203+30685G>A), 44761603(c.-203+30715A>G), 44761632(c.-203+30744T>A), 44762003(c.-203+31115T>C), 44762107(c.-203+31219A>G), 44762129(c.-203+31241C>A), 44762165(c.-203+31277T>A), 44762547(c.-203+31659C>T), 44762551(c.-203+31663A>G), 44762830(c.-203+31942G>A), 44763165(c.-203+32277C>T), 44763203(c.-203+32315C>T), 44763519(c.-203+32631T>C), 44763528(c.-203+32640G>A), 44763697(c.-203+32809A>G), 44763774(c.-203+32886T>C), 44763973(c.-203+33085G>A), 44764023(c.-203+33135G>A), 44764206(c.-203+33318C>T), 44764479(c.-203+33591C>T), 44764484(c.-203+33596C>T), 44764511(c.-203+33623T>G), 44764544(c.-203+33656G>A), 44764870(c.-203+33982C>A), 44764975(c.-203+34087G>A), 44765213(c.-203+34325C>A), 44765526(c.-203+34638G>T), 44765566(c.-203+34678G>A), 44766004(c.-203+35116T>A), 44766023(c.-203+35135G>A), 44767212(c.-203+36324T>G), 44767251(c.-203+36363C>T), 44767527(c.-203+36639A>G), 44767551(c.-203+36663T>A), 44767552(c.-203+36664C>A), 44767553(c.-203+36665C>T), 44767584(c.-203+36696C>T), 44767688(c.-203+36800T>C), 44767842(c.-203+36954A>C), 44767873(c.-203+36985T>C), 44767902(c.-203+37014G>A), 44767944(c.-203+37056C>T), 44768260(c.-203+37372T>A), 44768367(c.-203+37479G>A), 44768461(c.-203+37573C>T), 44768623(c.-203+37735T>C), 44768734(c.-203+37846G>A), 44768739(c.-203+37851A>G), 44768750(c.-203+37862A>G), 44768862(c.-203+37974A>T), 44768991(c.-203+38103A>G), 44769185(c.-203+38297C>G), 44769188(c.-203+38300G>C), 44769288(c.-203+38400G>C), 44769368(c.-203+38480T>G), 44769883(c.-203+38995A>G), 44769962(c.-203+39074C>A), 44770236(c.-203+39348G>A), 44770738(c.-203+39850T>A), 44770807(c.-203+39919A>G), 44770964(c.-203+40076T>C), 44771060(c.-203+40172T>C), 44771111(c.-203+40223A>G), 44771309(c.-203+40421A>G), 44771412(c.-203+40524G>A), 44771778(c.-203+40890A>G), 44771890(c.-203+41002A>G), 44772163(c.-203+41275C>T), 44772526(c.-203+41638C>T), 44772643(c.-203+41755C>T), 44772753(c.-203+41865C>T), 44772767(c.-203+41879A>G), 44772847(c.-203+41959G>A), 44772946(c.-203+42058G>A), 44772989(c.-203+42101A>G), 44773544(c.-203+42656T>A), 44773883(c.-203+42995C>A), 44773902(c.-203+43014C>T), 44773907(c.-203+43019G>T), 44774018(c.-203+43130T>C), 44774184(c.-203+43296G>A), 44774219(c.-203+43331C>G), 44774403(c.-203+43515C>T), 44774609(c.-203+43721T>C), 44774658(c.-203+43770C>G), 44774723(c.-203+43835T>C), 44775034(c.-203+44146G>T), 44775072(c.-203+44184C>T), 44775786(c.-203+44898A>G), 44775854(c.-203+44966G>A), 44775901(c.-203+45013G>A), 44775955(c.-203+45067A>G), 44776016(c.-203+45128A>G), 44776323(c.-203+45435G>T), 44776346(c.-203+45458C>T), 44776538(c.-203+45650A>G), 44776586(c.-203+45698A>G), 44776857(c.-203+45969C>T), 44777112(c.-203+46224A>C), 44777124(c.-203+46236A>G), 44777346(c.-202-46034C>T), 44777374(c.-202-46006A>G), 44777528(c.-202-45852C>T), 44777533(c.-202-45847C>T), 44777572(c.-202-45808G>A), 44777765(c.-202-45615C>T), 44778114(c.-202-45266A>G), 44778115(c.-202-45265G>T), 44778123(c.-202-45257C>T), 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44866244(c.76+17823C>T), 44866388(c.76+17967G>C), 44866399(c.76+17978C>A), 44866548(c.76+18127T>C), 44866769(c.77-17935C>T), 44866787(c.77-17917G>A), 44866895(c.77-17809A>C), 44866929(c.77-17775T>C), 44866939(c.77-17765T>C), 44867153(c.77-17551C>T), 44867161(c.77-17543A>C), 44867267(c.77-17437G>A), 44867334(c.77-17370A>T), 44867336(c.77-17368T>G), 44867337(c.77-17367A>T), 44867355(c.77-17349T>C), 44867376(c.77-17328C>A), 44867591(c.77-17113T>C), 44867642(c.77-17062C>A), 44867704(c.77-17000G>A), 44867730(c.77-16974C>T), 44867767(c.77-16937C>T), 44867809(c.77-16895T>C), 44868027(c.77-16677A>G), 44868045(c.77-16659G>A), 44868227(c.77-16477G>T), 44868672(c.77-16032A>C), 44868767(c.77-15937G>A), 44869186(c.77-15518A>G), 44869724(c.77-14980A>G), 44869753(c.77-14951C>T), 44870036(c.77-14668C>T), 44870737(c.77-13967G>A), 44870748(c.77-13956A>C), 44870763(c.77-13941C>T), 44871292(c.77-13412C>T), 44871357(c.77-13347C>T), 44871360(c.77-13344A>G), 44871453(c.77-13251C>G), 44871473(c.77-13231G>A), 44871629(c.77-13075T>G), 44871675(c.77-13029A>G), 44871871(c.77-12833C>G), 44871888(c.77-12816G>C), 44871918(c.77-12786C>A), 44871926(c.77-12778C>T), 44872143(c.77-12561G>C), 44872199(c.77-12505T>G), 44872821(c.77-11883C>T), 44873069(c.77-11635A>C), 44873684(c.77-11020G>A), 44873817(c.77-10887T>C), 44874510(c.77-10194G>A), 44874605(c.77-10099T>C), 44874831(c.77-9873C>A), 44874886(c.77-9818A>C), 44875467(c.77-9237A>T), 44875472(c.77-9232A>T), 44875558(c.77-9146A>C), 44876295(c.77-8409T>C), 44877238(c.77-7466G>A), 44877290(c.77-7414C>A), 44877891(c.77-6813T>G), 44877941(c.77-6763G>T), 44877951(c.77-6753C>T), 44878151(c.77-6553C>T), 44878190(c.77-6514A>G), 44878373(c.77-6331C>A), 44878809(c.77-5895A>C), 44878983(c.77-5721T>C), 44879267(c.77-5437G>C), 44879271(c.77-5433G>C), 44879275(c.77-5429G>C), 44879279(c.77-5425G>C), 44879369(c.77-5335G>T), 44879696(c.77-5008A>C), 44879699(c.77-5005A>T), 44879747(c.77-4957T>A), 44879858(c.77-4846T>A), 44882088(c.77-2616C>T), 44882258(c.77-2446T>C), 44882744(c.77-1960C>A), 44884456(c.77-248A>C), 44885264(c.253+384G>A), 44885397(c.253+517G>A), 44885689(c.253+809C>A), 44885904(c.253+1024T>C), 44885972(c.253+1092G>A), 44886299(c.253+1419T>C), 44886372(c.253+1492G>A), 44886597(c.253+1717T>C), 44886610(c.253+1730T>G), 44886803(c.253+1923C>T), 44887362(c.253+2482C>A), 44887453(c.253+2573G>T), 44887525(c.253+2645G>T), 44888404(c.253+3524T>C), 44888494(c.253+3614C>G), 44888546(c.253+3666T>C), 44889232(c.253+4352G>A), 44889349(c.253+4469C>T), 44889577(c.253+4697C>T), 44889821(c.253+4941C>T), 44890498(c.253+5618A>G), 44890695(c.254-5559G>C), 44891050(c.254-5204G>T), 44891071(c.254-5183G>A), 44891092(c.254-5162A>T), 44891142(c.254-5112G>A), 44891143(c.254-5111C>T), 44892988(c.254-3266C>G), 44893587(c.254-2667A>G), 44893644(c.254-2610A>C), 44893949(c.254-2305T>C), 44894677(c.254-1577T>C), 44894797(c.254-1457T>C), 44894813(c.254-1441T>G), 44894835(c.254-1419T>C), 44895009(c.254-1245T>A), 44895010(c.254-1244A>G), 44895020(c.254-1234A>T), 44895982(c.254-272G>T), 44896580(c.489+91A>G), 44897078(c.489+589G>T), 44897483(c.489+994C>T), 44897540(c.489+1051C>A), 44897926(c.489+1437A>G), 44898239(c.489+1750A>G), 44898498(c.489+2009T>C), 44898588(c.489+2099T>C), 44899133(c.489+2644G>C), 44899435(c.490-2791A>G), 44899718(c.490-2508A>C), 44900500(c.490-1726A>G), 44900537(c.490-1689T>A), 44900623(c.490-1603A>G), 44900979(c.490-1247T>G), 44901080(c.490-1146C>T), 44901215(c.490-1011C>T), 44901272(c.490-954C>A), 44901305(c.490-921C>T), 44901309(c.490-917A>C), 44901804(c.490-422A>G), 44902005(c.490-221C>T), 44902012(c.490-214G>A), 44902098(c.490-128G>A), +1kb 44903725(c.467G>T), 44903939(c.681A>T), 44904672(c.1414T>C), 44904714(c.1456C>T), 44905037(c.1779A>G), 44905328(c.2070G>C), 44906567(c.3309C>T), 44906751(c.3493G>A), 44906780(c.3522G>A), 44906809(c.3551G>A), 44906819(c.3561G>A), 44906822(c.3564G>A), 44906836(c.3578C>T), 44906881(c.3623C>G), 44906991(c.3733G>A), 44907058(c.3800A>G), 44907443(c.4185T>C), 44907583(c.4325T>C), 44907675(c.4417T>C), 44907701(c.4443A>G),
Insertions	-1kb 44728509 (c.-119837_-119836insA), 44730353 (c.-117993_-117992insCCA), 5'UTR CDS 3'UTR INTRON 44732824 (c.-203+1941_-203+1942dupTT), 44733371 (c.-203+2483_-203+2484insCTTGT), 44738214 (c.-203+7329dupA), 44738777 (c.-203+7893_-203+7894insGGTAGGTATGTA), 44740197 (c.-203+9309_-203+9310insCCTAG), 44740324 (c.-203+9436_-203+9437insGCCC), 44740585 (c.-203+9698_-203+9699insTCAA), 44741450 (c.-203+10565_-203+10568dupATAT), 44742004 (c.-203+11117dupG), 44742654 (c.-203+11767_-203+11768insAT), 44744162 (c.-203+13283_-203+13284dupTT), 44744703 (c.-203+13817dupA), 44745124 (c.-203+14238dupG), 44745408 (c.-203+14521_-203+14524dupTTTT), 44748112 (c.-203+17228_-203+17231dupACCG), 44750373 (c.-203+19492dupT), 44750776 (c.-203+19887_-203+19888dupTG), 44750829 (c.-203+19944dupA), 44750834 (c.-203+19946dupA), 44751631 (c.-203+20744_-203+20745insTTCT), 44754522 (c.-203+23645_-203+23647dupAAA), 44755491 (c.-203+24606dupG), 44758155 (c.-203+27274dupC), 44758609 (c.-203+27731dupT), 44759379 (c.-203+28492dupC), 44760992 (c.-203+30105dupC), 44763477 (c.-203+32590dupT), 44763479 (c.-203+32591_-203+32592insT), 44765220 (c.-203+34332_-203+34333insG), 44765227 (c.-203+34340dupG), 44765404 (c.-203+34516_-203+34517insTG), 44765865 (c.-203+34979_-203+34980insAAG), 44767178 (c.-203+36291_-203+36293dupAAA), 44768426 (c.-203+37542_-203+37543dupGT), 44768713 (c.-203+37825_-203+37826insCA), 44768772 (c.-203+37886_-203+37887insTCTGA), 44769716 (c.-203+38838_-203+38841dupAAAA), 44770660 (c.-203+39773_-203+39774insGA), 44771416 (c.-203+40528_-203+40529insTA), 44773563 (c.-203+42675_-203+42676insTC), 44774269 (c.-203+43396_-203+43397dupTT), 44775513 (c.-203+44627_-203+44629dupTCT), 44776464 (c.-203+45586_-203+45588dupTTT), 44778163 (c.-202-45216_-202-45215dupCT), 44778512 (c.-202-44861_-202-44859dupAAA), 44779759 (c.-202-43621dupT), 44779761 (c.-202-43619_-202-43618insT), 44785429 (c.-202-37951_-202-37950insGT), 44785509 (c.-202-37863dupA), 44785518 (c.-202-37862_-202-37861insA), 44786690 (c.-202-36690_-202-36689insTTTA), 44788470 (c.-202-34909_-202-34908insGT), 44789767 (c.-202-33612_-202-33611insAC), 44790613 (c.-202-32750_-202-32747dupGTTT), 44791213 (c.-202-32167_-202-32166insA), 44792491 (c.-202-30880dupT), 44792498 (c.-202-30880dupT), 44793643 (c.-202-29740_-202-29737dupGGCA), 44795285 (c.-202-28094dupT), 44796292 (c.-202-27082dupT), 44798735 (c.-202-24645_-202-24644insTTTT), 44798890 (c.-202-24487_-202-24486insGGGTTTG), 44800577 (c.-202-22802_-202-22801insCT), 44801749 (c.-202-21631_-202-21630insT), 44802356 (c.-202-21024_-202-21023insGGC), 44804253 (c.-202-19122_-202-19119dupTTTT), 44804477 (c.-202-18895_-202-18894dupAA), 44805603 (c.-202-17775dupT), 44806867 (c.-202-16511_-202-16510insCCTCT), 44808003 (c.-202-15376_-202-15375insCT), 44808885 (c.-202-14492_-202-14491insCCCGTC), 44809506 (c.-202-13874_-202-13873insG), 44809719 (c.-202-13658_-202-13657insATATTA), 44810405 (c.-202-12968dupT), 44810643 (c.-202-12737dupT), 44810746 (c.-202-12633_-202-12631dupTGT), 44810750 (c.-202-12629_-202-12628insGTT), 44811697 (c.-202-11686_-202-11683dupCCGT), 44814000 (c.-202-9372_-202-9371dupAA), 44815019 (c.-202-8359_-202-8354dupTTTGAT), 44821692 (c.-202-1685dupC), 44823097 (c.-202-282dupT), 44823743 (c.-67+266_-67+269dupTGTA), 44825443 (c.-67+1934dupT), 44825948 (c.-67+2434dupA), 44826227 (c.-67+2708_-67+2712dupTTTTT), 44826720 (c.-67+3211dupT), 44828085 (c.-67+4573dupA), 44828431 (c.-67+4917_-67+4918insCA), 44830450 (c.-67+6935dupA), 44831255 (c.-67+7741_-67+7742insTA), 44831324 (c.-67+7809_-67+7810insT), 44832731 (c.-67+9216_-67+9217insCG), 44834265 (c.-67+10753dupA), 44835992 (c.-66-12287dupT), 44836627 (c.-66-11653_-66-11652insGAT), 44837970 (c.-66-10306_-66-10305insACTAAGTA), 44838992 (c.-66-9286_-66-9285insAGTG), 44846360 (c.-66-1920_-66-1919insGT), 44851089 (c.76+2668_76+2669insATAT), 44851101 (c.76+2680_76+2681insCC), 44851790 (c.76+3369_76+3370insGCTCCC), 44853590 (c.76+5169_76+5170insTT), 44858836 (c.76+10422dupT), 44863489 (c.76+15069_76+15072dupGTTG), 44864109 (c.76+15689_76+15693dupTCAAT), 44864613 (c.76+16191_76+16192dupTT), 44865664 (c.76+17249dupT), 44866041 (c.76+17622dupA), 44866304 (c.76+17880_76+17883dupTTTT), 44868398 (c.77-16305dupT), 44868513 (c.77-16181dupT), 44868522 (c.77-16181dupT), 44868993 (c.77-15709_77-15708insCTT), 44869735 (c.77-14972_77-14969dupTACC), 44869824 (c.77-14882_77-14880dupGAA), 44870159 (c.77-14544_77-14543insGA), 44870429 (c.77-14274dupT), 44871716 (c.77-12985dupC), 44871719 (c.77-12985dupC), 44871830 (c.77-12874_77-12873insAAA), 44871916 (c.77-12788_77-12787insG), 44871918 (c.77-12786_77-12785insG), 44872927 (c.77-11777_77-11776insC), 44874649 (c.77-10054_77-10051dupCCAC), 44876525 (c.77-8179_77-8178insG), 44881519 (c.77-3185dupA), 44887425 (c.253+2554dupT), 44887938 (c.253+3060dupG), 44891010 (c.254-5241_254-5240dupTT), 44895683 (c.254-570dupC), 44895863 (c.254-391_254-390insA), 44895870 (c.254-383dupA), 44898008 (c.489+1521_489+1522insGGTG), 44899550 (c.490-2671dupA), 44900947 (c.490-1272_490-1271dupTT), +1kb
Deletions	-1kb 44726116 (c.-122229delA), 44726267 (c.-122078delA), 44726946 (c.-121399_-121394delAAAACA), 44728269 (c.-120076delA), 44728349 (c.-119996_-119990delTTTTTTT), 44729580 (c.-118765delC), 5'UTR CDS 3'UTR INTRON 44730951 (c.-203+75_-203+79delGGGGG), 44733115 (c.-203+2229delC), 44734845 (c.-203+3960_-203+3964delGCCTT), 44736802 (c.-203+5915_-203+5923delCCCCCAAAA), 44736962 (c.-203+6078_-203+6085delCTGGCCCA), 44737692 (c.-203+6812_-203+6815delGATA), 44738728 (c.-203+7841_-203+7848delCGTGTATG), 44739223 (c.-203+8338delC), 44742173 (c.-203+11286delT), 44742227 (c.-203+11340_-203+11341delCC), 44743643 (c.-203+12767_-203+12768delAG), 44744575 (c.-203+13688_-203+13689delCC), 44744826 (c.-203+13939_-203+13942delTTTT), 44745376 (c.-203+14489_-203+14492delTATG), 44745621 (c.-203+14741delT), 44747708 (c.-203+16821_-203+16822delAT), 44747999 (c.-203+17112delC), 44748019 (c.-203+17132_-203+17136delAAGAA), 44749047 (c.-203+18180_-203+18181delTT), 44750213 (c.-203+19331_-203+19333delAAG), 44751107 (c.-203+20220_-203+20221delAA), 44751158 (c.-203+20276_-203+20279delAGTT), 44751163 (c.-203+20276_-203+20279delAGTT), 44753207 (c.-203+22321_-203+22323delTGA), 44753221 (c.-203+22334_-203+22337delTTTA), 44757286 (c.-203+26399_-203+26402delAATA), 44758802 (c.-203+27915delT), 44758812 (c.-203+27925delT), 44758866 (c.-203+27984_-203+27987delGAGA), 44758871 (c.-203+27984_-203+27987delGAGA), 44759564 (c.-203+28679_-203+28682delTTGT), 44759581 (c.-203+28695_-203+28696delTG), 44759673 (c.-203+28786_-203+28793delTAGATAGA), 44760144 (c.-203+29258delT), 44761536 (c.-203+30649delT), 44761564 (c.-203+30677_-203+30678delTT), 44761696 (c.-203+30809delA), 44762852 (c.-203+31995_-203+32002delAGTGTGTG), 44763411 (c.-203+32524_-203+32525delCT), 44763592 (c.-203+32705delC), 44763833 (c.-203+32961_-203+32962delTT), 44764222 (c.-203+33335delG), 44764288 (c.-203+33401_-203+33404delGTTT), 44764313 (c.-203+33426delT), 44764409 (c.-203+33526_-203+33528delCTT), 44764413 (c.-203+33526_-203+33528delCTT), 44765162 (c.-203+34275_-203+34276delAC), 44765166 (c.-203+34279_-203+34282delCACA), 44765208 (c.-203+34321_-203+34322delAG), 44765213 (c.-203+34326_-203+34331delTTTTCT), 44768713 (c.-203+37826_-203+37827delAG), 44768769 (c.-203+37882delA), 44769330 (c.-203+38443_-203+38444delTT), 44769348 (c.-203+38461delT), 44770901 (c.-203+40014_-203+40015delAT), 44770969 (c.-203+40091delG), 44772302 (c.-203+41415_-203+41417delTTA), 44773395 (c.-203+42511_-203+42514delGTTT), 44779261 (c.-202-44108delT), 44779655 (c.-202-43724_-202-43723delTT), 44779905 (c.-202-43472_-202-43467delAGTTGT), 44780565 (c.-202-42813delA), 44782547 (c.-202-40820_-202-40818delCCT), 44783952 (c.-202-39427delT), 44784592 (c.-202-38787delG), 44784916 (c.-202-38463_-202-38457delCATTCTT), 44785889 (c.-202-37490_-202-37489delTG), 44788689 (c.-202-34676_-202-34674delAAA), 44792415 (c.-202-30964_-202-30963delTT), 44793501 (c.-202-29877delT), 44794699 (c.-202-28679_-202-28673delCTAAAAA), 44800917 (c.-202-22462_-202-22461delGT), 44802903 (c.-202-20465_-202-20461delTTTTT), 44804927 (c.-202-18452_-202-18447delAGAGTT), 44805996 (c.-202-17379_-202-17378delTA), 44807545 (c.-202-15830_-202-15828delTAT), 44807665 (c.-202-15714_-202-15710delAAGTA), 44810050 (c.-202-13324_-202-13323delAT), 44811602 (c.-202-11775delA), 44811932 (c.-202-11447_-202-11446delAA), 44811985 (c.-202-11394_-202-11393delTT), 44812578 (c.-202-10795_-202-10794delAG), 44813089 (c.-202-10288delA), 44814740 (c.-202-8639_-202-8638delTC), 44815375 (c.-202-8004_-202-8000delTAGTT), 44817930 (c.-202-5429_-202-5427delCCT), 44819953 (c.-202-3426_-202-3422delTTTGG), 44820468 (c.-202-2905_-202-2899delGTTTTTG), 44821958 (c.-202-1421_-202-1419delTTA), 44822202 (c.-202-1176_-202-1172delGTAAA), 44826266 (c.-67+2752_-67+2754delCAC), 44826481 (c.-67+2969_-67+2976delGGCTTGAG), 44827839 (c.-67+4325delG), 44827918 (c.-67+4409_-67+4412delTATC), 44827923 (c.-67+4409_-67+4412delTATC), 44829260 (c.-67+5750delG), 44830485 (c.-67+6971_-67+6976delGGGGGG), 44830975 (c.-67+7461_-67+7466delCTTGCT), 44833874 (c.-67+10361delA), 44834490 (c.-67+10983delA), 44836241 (c.-66-12029_-66-12027delTTT), 44836665 (c.-66-11610_-66-11608delTTA), 44836669 (c.-66-11610_-66-11608delTTA), 44838739 (c.-66-9537_-66-9536delAT), 44839275 (c.-66-9004_-66-9003delGC), 44839842 (c.-66-8429_-66-8426delCTCC), 44842134 (c.-66-6133delT), 44842689 (c.-66-5579_-66-5577delGTT), 44846513 (c.-66-1764_-66-1759delCCTTTT), 44847443 (c.-66-836_-66-835delAT), 44850927 (c.76+2526delT), 44851085 (c.76+2665_76+2666delGC), 44851448 (c.76+3040_76+3046delGGTAGAA), 44855867 (c.76+7461_76+7464delCCCT), 44857411 (c.76+8991_76+8998delACTCCCCC), 44857566 (c.76+9150_76+9153delTTGT), 44860790 (c.76+12378_76+12381delGTGT), 44861290 (c.76+12880delA), 44863263 (c.76+14849_76+14852delTATT), 44865079 (c.76+16663_76+16666delACAG), 44865264 (c.76+16844_76+16850delCCCTCCT), 44865476 (c.76+17064delT), 44866383 (c.76+17965_76+17968delGGGC), 44866621 (c.77-18080delG), 44866970 (c.77-17731_77-17726delTTTTTT), 44867338 (c.77-17365_77-17360delTAACCA), 44867668 (c.77-17018delT), 44867986 (c.77-16717_77-16716delTT), 44868005 (c.77-16696_77-16689delTGATAAGT), 44868495 (c.77-16208delT), 44870819 (c.77-13859_77-13856delAACA), 44871159 (c.77-13541delT), 44871897 (c.77-12806_77-12805delCA), 44872023 (c.77-12680_77-12673delTTTATTTA), 44873593 (c.77-11110_77-11106delGTTTT), 44873621 (c.77-11071_77-11067delTTTTT), 44877028 (c.77-7671_77-7665delTACTGTG), 44879697 (c.77-5004delA), 44881045 (c.77-3650delA), 44881639 (c.77-3060_77-3058delAAA), 44882845 (c.77-1852_77-1851delTC), 44893344 (c.254-2907_254-2906delTC), 44894778 (c.254-1475_254-1474delTT), 44895857 (c.254-396_254-389delTTTTTTTT), +1kb 44904905 (c.1648delT), 44906827 (c.3570delG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	0
synonymous substitutions
non-synonymous substitutions
B6 transcript (ENSMUST00000173367)	MMPPKCPLLATMLVLQILKKGRRGKGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATT NNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRAD SRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGT NSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKT ESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLE EAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRA AAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLR PSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRW GPNVQRLACIKKHLRSQGITMDELPLI
MSMv4 transcript	MMPPKCPLLATMLVLQILKKGRRGKGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATT NNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRAD SRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGT NSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKT ESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLE EAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRA AAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLR PSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRW GPNVQRLACIKKHLRSQGITMDELPLI
homology	100.00 (507 / 507)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Jarid2 (ENSMUSG00000038518)
Transcript ID	ENSMUST00000173367


..........TACGGGCTGCCTGTGTTGGGGGGTCGGTCTCCATTTTTCCGTTCACGGTT
TCACCTCGGCGTTGGGAGTCTCGGTCGCGGACAGCCCTAGTCCTGAGGGTAAAGACCCCC
TTCACCGTCTCCAGGGACGGCGGGGCTTCACCTCGGAGCCACCGGCGACGGCCTAGGGTC
GCGTCGGCCCCGGGGACAGGGGCGGGCACGCGGGCCGGCGACCACGAGGCCGCGAGCTTT
CGCCGGGAGGCTGCCCCAGCCGCGTCTGCCTCGCGCGTGGGGTCGCGTGCGGCCGCGGGC
CGGCTTGGAGCCGTGACCTCGGACCACCCCGGCGGCCGGGCGGCCGCCCGCTTGCTCGGC
ACACGGGCGCTTGTCCTGAGGTGACACCGCCGGCAACGGCTGAAGCAAGCGGGCGCTGCC
GATCAGCGAGTTCGCACCGAGCGAGGATCCCTCTTGGTGCGTGGCCCAGTTTGGCTGAGG
ACCCGCTCCAACCCCTCGCTGACACCGCCCCCCGCCGCCGCCGCCGCCACGCTCCGAGGC
CTTTCCCCCGGGAAGCCTGGCGGCTTGCCCTCGCGGGCCCGCGGGCGCGCTCTCGCGCGC
CGATTCCTCGATTCCACAGGCGGTTCGCGCCCGGGGTGGGGGCGGGGCGGGGCGCGCGGG
GCCGGGCCGAGCCGGGCCGGGCCGGGAGGGCGGCCCCCGCGGGGAGGGGACTGGGGGGCG
GGGCCGGCGTGGGGAGTTCCTCGCTCCCGGACCACACGCTCCGCGGGCCAATCCCGAGCC
AGCCTCTAGCAGTGTCGCACGCGGGACACGTCCAAGCGTTTGTTGGCAGGGCCCGGGGAA
GGGGGAGGGGGAAGCGATCGGGGAAAAGGGAGTTGAGTGACAGGAGGCGTGGGGCACGCT
GGGAATTGTAGTTCTTCGCTTCCGTGGCCATAGCCATTTTGTAGTCAAGGGACTACAACT
TCCAGAAGATCAAGGGGACTATTCTAAGGTGCCCCGGGAATAGGCGGCTC
TCCCCCGGGCCGGGCGTCCTGGGGCACTGGTACCCAGCTGCCCGGCTGCAG
GTAGACGTGAGGGCAGTGGCGAAGG..........ATTTTCAGTAATTCTCCTTCCACAG
GATGACAGCGATGGGATCCCGTGGTCAGAAGAGAGAGTTGTACGAAAAGTCCTGTATTTGTCCCTAAAGGAATTCAAGAATGCACAGAAAAGGCAGCATGGGGAAGGCCTTGCCGGGAGCCTGAAGGCGGTAAATG
GTGAGTTGAAAGTGGAACTGGATGG..........TGTTTGTCCCTTTTCTCACCTGTAG
GGCTTCTTGGTAATGCCCAGGCTAAGGCATTAGGACCAGCCTCAGAGCAGTCAGAGAACGAGAAGGATGATGCCTCCCAAGTGTCCTCTACTAGCAACGATGTTAGTTCTTCAGATTTTGAAGAAGGGCCGTCGAGGAAAAG
GTTAGTACCCAAGCATTAGTGAATA..........GAACTACATATGTTAAACCCATCAG
GTTCTCCTGCGCTGCCCAACAGTATGGTATATTTTGGAAGCTCTCAGGATGAGGAGGATGTCGAAGAGGAAGATGATGAGACGGAAGATGTCAAAGCAACCACCAACAATGCTTCATCTTCGTGCCAGTCAACCCCCAGGAAAGGAAAAACCCATAAGCATGTACACAACGGGCACG
GTAGGTTCACCGTGGAGGCTGTGTG..........TTCTTCCCTTCTCTTCCTTTTCTAG
TTTTCAATGGCTCCAGTAGGTCAGCACGGGAGAAAGAGCCTGCTCACAAACACAGAAGCAAAGAGGCCACTCCGGGGAAGGAGAAGCACAGCGAGCCCAGGGCAGACAGCCGGAGAGAACAGGCTTCAGGGGCTCAGCCCACGGCCGCCTCGGCTGCGGCTTCCTCTGCCAAGGGACTTGCTGCCAACCACCAACCTCCCCCTTCGCATCGGTCTGCTCAGGACTTACGGAAACAG
GTAACCCTCAGTGAGGGCCTTTCTA..........TCCCCTGCTTCTGCTGCCTCCATAG
GTGTCTAAGGTAAATGGAGTCACTCGAATGTCATCTCTGGGTGCAGGTACAAACAGTGCCAAAAAGATCCGAGAAGTCAGACCTTCACCATCCAAAACTGTGAAGTACACTGCCACAGTGACCAAGGGGACTGTCACATACACCAAAGCCAAGAGAGAACTGGTCAAGGAAACCAAACCCAACCACCACAAACCCAGTTCAGCTGTCAACCACACAATCTCAGGGAAAACTGAAAGTAGCAATGCAAAAACCCGCAAACAGGTGCTATCCCTTGGGGGGGCGTCCAAGTCCACCGGGCCTGCTGCCAGTGGCCTCAAGGCCAGCAGCAGGTTGAACCCAAAGTCATGCACTAAGGAGGTGGGGGGGCGGCAGCTGAGGGAGGGGCTGCGGAATTCCAAAAGGAGACTGGAAGAGGCACAGCAAGTGGACAAGCCGCAGTCACCCCCCAAGAAGATGAAGGGGGTGGCAGGCAATGCTGAAGCCCCTGGCAAAAAGGCCTCAGCGGCTTCAGGAGAAAAGTCTCTGCTGAATGGACACGTGAAGAAGGAAGTGCCCGAGCGAAGTTTGGAAAGGAATCGGCCAAAGCGGGCCGCGGCTGGCAAGAATATGCTGGGCAAACAAGCACATGGCAAGACAGAGGGCACCCCCTGTGAAAATCGTTCTACCTCGCAACCCGAGTCCTCGCACAAGCCGCATGACCCACAGGGCAAGCCAGAGAAGGGGAGCGGCAAGTCTGGGTGGGCAGCGATGGACGAGATCCCTGTCCTCAGGCCCTCCGCCAAGGAGTTCCACGACCCGCTCATCTACATCGAGTCAGTACGTGCTCAGGTGGAGAAGTACGGGATGTGTCGCGTGATTCCCCCTCCAGACTGGCGGCCAGAGTGCAAGCTCAACGATGAGATGCGCTTTGTCACGCAGATCCAGCACATCCATAAGCTGGGCCGGCGCTGGGGCCCCAACGTGCAGCGGCTAGCCTGCATAAAGAAGCACCTCAGATCTCAGGGCATCACCATGGATGAGCTCCCCCTCATAG
GTGAGTTAATTCGGGGATTGCCGGGTGGGTTCAGCTGGGCCGTCATCTCTAACTCGACAA
TAGTTGCACTTCTCAACTCATTTCCCTGCTCTTGTAGAACCTCTCTCTCTTTCGTAATAA
GTTTGGGGCTTGCTCTTGGTGCTAGAGCCCCTGAGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCATGGCTTTTTATTGCTCTAGAGTTGCTGTGGTTGGGCAGTGTCCAGGG
AAGGGCTGAGGTCAGGCTGCTACAATGTGCCATGGCTTCAAAACCACAAATTAGGGGTTT
CTAATTCTGCATGCTGGCAGGAGTGGTTTTTGCTAAATTGTCTCTGCCTTGTAGTAGGCC
ACCTGCACTTTGGTCCTCATAGAGTCTTTCCTCTGTATGTCTGTCTTGATATCTCCTTAT
AAGGACATCAGTCAGGCTGTAGTAAGGCCTACTTGGGTGACCTTATTTTAACTTAGTGGC
TACTTTATAGACTCTTCCTCACAATACCATTCCATCCTGGGGTTTTAGGGTTTTGTACTT
GTTAATATCAGCTTGGGTGGTCTTATATTTCACCTTACATGGATTATTCCTTTTTTTCTT
TTCTTTTTTCTTTTTTTTTTTAAGTTTCTCTCTCTTAAGATTTATTTATTATTATATCCA
AAGTACACTGTAGCTGTATTCAGACACACTAGGAGAGGGCGTCAGATCTCATTACGGATG
GTTGTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGGACCCTCAGAAGAGCAGTTAG
TGCTCTAAACTACTAAGCCATCTCTCCAGCCCCTTATTCCTTTTTCTTTTTTAGTTTGTC
CTAGCATTCCAGTACAGACATTTCTAGTGAAGGCCAACTAGCTTTTACATTGAGGCCAGT
CCTTCAAGGTGGCCAGCAGCTCCCCTCCCTGTGGGTTTCA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TACGGGCTGCCTGTGTTGGGGGGTCGGTCTCCATTTTTCCGTTCACGGTT TCACCTCGGCGTTGGGAGTCTCGGTCGCGGACAGCCCTAGTCCTGAGGGTAAAGACCCCC TTCACCGTCTCCAGGGACGGCGGGGCTTCACCTCGGAGCCACCGGCGACGGCCTAGGGTC GCGTCGGCCCCGGGGACAGGGGCGGGCACGCGGGCCGGCGACCACGAGGCCGCGAGCTTT CGCCGGGAGGCTGCCCCAGCCGCGTCTGCCTCGCGCGTGGGGTCGCGTGCGGCCGCGGGC CGGCTTGGAGCCGTGACCTCGGACCACCCCGGCGGCCGGGCGGCCGCCCGCTTGCTCGGC ACACGGGCGCTTGTCCTGAGGTGACACCGCCGGCAACGGCTGAAGCAAGCGGGCGCTGCC GATCAGCGAGTTCGCACCGAGCGAGGATCCCTCTTGGTGCGTGGCCCAGTTTGGCTGAGG ACCCGCTCCAACCCCTCGCTGACACCGCCCCCCGCCGCCGCCGCCGCCACGCTCCGAGGC CTTTCCCCCGGGAAGCCTGGCGGCTTGCCCTCGCGGGCCCGCGGGCGCGCTCTCGCGCGC CGATTCCTCGATTCCACAGGCGGTTCGCGCCCGGGGTGGGGGCGGGGCGGGGCGCGCGGG GCCGGGCCGAGCCGGGCCGGGCCGGGAGGGCGGCCCCCGCGGGGAGGGGACTGGGGGGCG GGGCCGGCGTGGGGAGTTCCTCGCTCCCGGACCACACGCTCCGCGGGCCAATCCCGAGCC AGCCTCTAGCAGTGTCGCACGCGGGACACGTCCAAGCGTTTGTTGGCAGGGCCCGGGGAA GGGGGAGGGGGAAGCGATCGGGGAAAAGGGAGTTGAGTGACAGGAGGCGTGGGGCACGCT GGGAATTGTAGTTCTTCGCTTCCGTGGCCATAGCCATTTTGTAGTCAAGGGACTACAACT TCCAGAAGATCAAGGGGACTATTCTAAGGTGCCCCGGGAATAGGCGGCTC
1	EXON 1	44,730,838	44,730,888	-	-	51	TCCCCCGGGCCGGGCGTCCTGGGGCACTGGTACCCAGCTGCCCGGCTGCAG
	INTRON 1 - 2	44,730,889	44,823,379			92,491	GTAGACGTGAGGGCAGTGGCGAAGG..........ATTTTCAGTAATTCTCCTTCCACAG
2	EXON 2	44,823,380	44,823,515	-	-	136	GATGACAGCGATGGGATCCCGTGGTCAGAAGAGAGAGTTGTACGAAAAGTCCTGTATTTG TCCCTAAAGGAATTCAAGAATGCACAGAAAAGGCAGCATGGGGAAGGCCTTGCCGGGAGC CTGAAGGCGGTAAATG
	INTRON 2 - 3	44,823,516	44,848,279			24,764	GTGAGTTGAAAGTGGAACTGGATGG..........TGTTTGTCCCTTTTCTCACCTGTAG
3	EXON 3	44,848,280	44,848,421	-	1	142	GGCTTCTTGGTAATGCCCAGGCTAAGGCATTAGGACCAGCCTCAGAGCAGTCAGAGAACG AGAAGGATGATGCCTCCCAAGTGTCCTCTACTAGCAACGATGTTAGTTCTTCAGATTTTG AAGAAGGGCCGTCGAGGAAAAG
	INTRON 3 - 4	44,848,422	44,884,703			36,282	GTTAGTACCCAAGCATTAGTGAATA..........GAACTACATATGTTAAACCCATCAG
4	EXON 4	44,884,704	44,884,880	1	1	177	GTTCTCCTGCGCTGCCCAACAGTATGGTATATTTTGGAAGCTCTCAGGATGAGGAGGATG TCGAAGAGGAAGATGATGAGACGGAAGATGTCAAAGCAACCACCAACAATGCTTCATCTT CGTGCCAGTCAACCCCCAGGAAAGGAAAAACCCATAAGCATGTACACAACGGGCACG
	INTRON 4 - 5	44,884,881	44,896,253			11,373	GTAGGTTCACCGTGGAGGCTGTGTG..........TTCTTCCCTTCTCTTCCTTTTCTAG
5	EXON 5	44,896,254	44,896,489	1	0	236	TTTTCAATGGCTCCAGTAGGTCAGCACGGGAGAAAGAGCCTGCTCACAAACACAGAAGCA AAGAGGCCACTCCGGGGAAGGAGAAGCACAGCGAGCCCAGGGCAGACAGCCGGAGAGAAC AGGCTTCAGGGGCTCAGCCCACGGCCGCCTCGGCTGCGGCTTCCTCTGCCAAGGGACTTG CTGCCAACCACCAACCTCCCCCTTCGCATCGGTCTGCTCAGGACTTACGGAAACAG
	INTRON 5 - 6	44,896,490	44,902,225			5,736	GTAACCCTCAGTGAGGGCCTTTCTA..........TCCCCTGCTTCTGCTGCCTCCATAG
6	EXON 6	44,902,226	44,903,258	0	-	1,033	GTGTCTAAGGTAAATGGAGTCACTCGAATGTCATCTCTGGGTGCAGGTACAAACAGTGCC AAAAAGATCCGAGAAGTCAGACCTTCACCATCCAAAACTGTGAAGTACACTGCCACAGTG ACCAAGGGGACTGTCACATACACCAAAGCCAAGAGAGAACTGGTCAAGGAAACCAAACCC AACCACCACAAACCCAGTTCAGCTGTCAACCACACAATCTCAGGGAAAACTGAAAGTAGC AATGCAAAAACCCGCAAACAGGTGCTATCCCTTGGGGGGGCGTCCAAGTCCACCGGGCCT GCTGCCAGTGGCCTCAAGGCCAGCAGCAGGTTGAACCCAAAGTCATGCACTAAGGAGGTG GGGGGGCGGCAGCTGAGGGAGGGGCTGCGGAATTCCAAAAGGAGACTGGAAGAGGCACAG CAAGTGGACAAGCCGCAGTCACCCCCCAAGAAGATGAAGGGGGTGGCAGGCAATGCTGAA GCCCCTGGCAAAAAGGCCTCAGCGGCTTCAGGAGAAAAGTCTCTGCTGAATGGACACGTG AAGAAGGAAGTGCCCGAGCGAAGTTTGGAAAGGAATCGGCCAAAGCGGGCCGCGGCTGGC AAGAATATGCTGGGCAAACAAGCACATGGCAAGACAGAGGGCACCCCCTGTGAAAATCGT TCTACCTCGCAACCCGAGTCCTCGCACAAGCCGCATGACCCACAGGGCAAGCCAGAGAAG GGGAGCGGCAAGTCTGGGTGGGCAGCGATGGACGAGATCCCTGTCCTCAGGCCCTCCGCC AAGGAGTTCCACGACCCGCTCATCTACATCGAGTCAGTACGTGCTCAGGTGGAGAAGTAC GGGATGTGTCGCGTGATTCCCCCTCCAGACTGGCGGCCAGAGTGCAAGCTCAACGATGAG ATGCGCTTTGTCACGCAGATCCAGCACATCCATAAGCTGGGCCGGCGCTGGGGCCCCAAC GTGCAGCGGCTAGCCTGCATAAAGAAGCACCTCAGATCTCAGGGCATCACCATGGATGAG CTCCCCCTCATAG
	3' upstream sequence						GTGAGTTAATTCGGGGATTGCCGGGTGGGTTCAGCTGGGCCGTCATCTCTAACTCGACAA TAGTTGCACTTCTCAACTCATTTCCCTGCTCTTGTAGAACCTCTCTCTCTTTCGTAATAA GTTTGGGGCTTGCTCTTGGTGCTAGAGCCCCTGAGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCATGGCTTTTTATTGCTCTAGAGTTGCTGTGGTTGGGCAGTGTCCAGGG AAGGGCTGAGGTCAGGCTGCTACAATGTGCCATGGCTTCAAAACCACAAATTAGGGGTTT CTAATTCTGCATGCTGGCAGGAGTGGTTTTTGCTAAATTGTCTCTGCCTTGTAGTAGGCC ACCTGCACTTTGGTCCTCATAGAGTCTTTCCTCTGTATGTCTGTCTTGATATCTCCTTAT AAGGACATCAGTCAGGCTGTAGTAAGGCCTACTTGGGTGACCTTATTTTAACTTAGTGGC TACTTTATAGACTCTTCCTCACAATACCATTCCATCCTGGGGTTTTAGGGTTTTGTACTT GTTAATATCAGCTTGGGTGGTCTTATATTTCACCTTACATGGATTATTCCTTTTTTTCTT TTCTTTTTTCTTTTTTTTTTTAAGTTTCTCTCTCTTAAGATTTATTTATTATTATATCCA AAGTACACTGTAGCTGTATTCAGACACACTAGGAGAGGGCGTCAGATCTCATTACGGATG GTTGTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGGACCCTCAGAAGAGCAGTTAG TGCTCTAAACTACTAAGCCATCTCTCCAGCCCCTTATTCCTTTTTCTTTTTTAGTTTGTC CTAGCATTCCAGTACAGACATTTCTAGTGAAGGCCAACTAGCTTTTACATTGAGGCCAGT CCTTCAAGGTGGCCAGCAGCTCCCCTCCCTGTGGGTTTCA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Jarid2 (ENSMUSG00000038518)
Transcript ID	ENSMUST00000173367

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 507 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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