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Target CDS Information

Gene Symbol (Gene ID) Uggt1 (ENSMUSG00000037470)
Cross Reference
EMBL AC133102
GO GO:0003980, GO:0005783, GO:0006486, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name Uggt1-002
OTTP OTTMUSP00000054600
OTTT OTTMUST00000097356
UCSC uc007app.2
UniParc UPI00021CF758
Uniprot/SPTREMBL G3UZU8
Vega_transcript OTTMUST00000097356, Uggt1-002
Vega_translation 178941, OTTMUSP00000054600
Definition protein_id:ENSMUSP00000134640
translation:
MCSRGDANTADAAAARRVTGLRYNMRLLIALALPCLFSLAEANSKAITTSLTTKWFSAPL
LLEASEFLAEDSQEKFWSFVEATQNIGSSDHHDTDHSYYDAVLEAAFRFLSPLQQNLLKF
CLSLRSYSASIQAFQQIAVDEPPPEGCKSFLSVHGKQTCDLDTLESLLLTAADRPKPLLF
KGDHRYPSSNPESPVVILYSEIGHEEFSNIHHQLISKSNEGKINYVFRHYISNPSKEPVY
LSGYGVELAIKSTEYKAKDDTQELR

Chromosome 1
Length
Position(start - end)
34,073
36,210,053 - 36,244,127
Orient to Chromosome minus
Link Location : (1:36210053-36244127)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Uggt1 (ENSMUSG00000037470)
Transcript ID ENSMUST00000174266
Reports
substitution
cSNPs3
Insertion94
Deletion106
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num3
non-synonymous num0
synonymous substitutions 36216138 (p.Tyr230Tyr), 36227604 (p.His96His), 36234854 (p.Thr49Thr),
non-synonymous substitutions
B6 transcript
(ENSMUST00000174266)
MCSRGDANTADAAAARRVTGLRYNMRLLIALALPCLFSLAEANSKAITTSLTTKWFSAPL
LLEASEFLAEDSQEKFWSFVEATQNIGSSDHHDTDHSYYDAVLEAAFRFLSPLQQNLLKF
CLSLRSYSASIQAFQQIAVDEPPPEGCKSFLSVHGKQTCDLDTLESLLLTAADRPKPLLF
KGDHRYPSSNPESPVVILYSEIGHEEFSNIHHQLISKSNEGKINYVFRHYISNPSKEPVY
LSGYGVELAIKSTEYKAKDDTQELR*
MSMv4 transcript
MCSRGDANTADAAAARRVTGLRYNMRLLIALALPCLFSLAEANSKAITTSLTTKWFSAPL
LLEASEFLAEDSQEKFWSFVEATQNIGSSDHHDTDHSYYDAVLEAAFRFLSPLQQNLLKF
CLSLRSYSASIQAFQQIAVDEPPPEGCKSFLSVHGKQTCDLDTLESLLLTAADRPKPLLF
KGDHRYPSSNPESPVVILYSEIGHEEFSNIHHQLISKSNEGKINYVFRHYISNPSKEPVY
LSGYGVELAIKSTEYKAKDDTQELR*
homology100.00 (266 / 266)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Uggt1 (ENSMUSG00000037470)
Transcript ID ENSMUST00000174266
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AGAGGAATTGTCTCTGCCTCCTGAGAACTGGGATTACAGGTAGCTATTAC
TACAATTTCTACAAGGGTCCTGGAGATCTGAACTGTAGTCTTCACATCTGGGCAGCAAAT
ACTTTGTTTACTGAGTCATCTCCGCAGCCCGTGCCTGGCGTTTGCGGTGTATTCTGGGAA
TTGAGCTTTGGTTTCCAGCTTAGCAGCAAGAACCTTTGTCTTTTTTGCTTTCTTTTCCCC
TGATGCTGCTTGGGTCTTGGAGGTGGTGATATAGGTGTTTCAGTCAGAGCTGAGATCATT
TAGTCTCAGTCAGTTTGACCAGTTATGGATCTCTGCATTAACCAACATCACATACTCTAA
AACAAATTTATAACTTTTTCTTCCTTTTGAGATAGGGCCTTGAACTCACAGAGATTCTTC
TGCCTTTTTTTTTTTTTTTTTTTTTCTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGC
CCTCGAACTCACAAATCCGTTTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGTGC
CACCACGCCCAGCATGAGCTTCTTCTGCTTTTTGTGTCTTGAGTTTGTGTACGTTTATTT
AACTTGAGAGGAATAAATAATAAAAATAGAGAGAAAACGGTTGAAATAACTATCTGCCGG
GGCGGTTGGACTGCGCCTTGAAGCTCACCTGCTTGAACTGGGTCTTCTAGGATCTTAAAT
TCAGGAGGCGAGCTGGCTCAACCAGGAGAGGGGAGGGGCCGAGAGAAGGGGCGGGTCTTA
TGCCGGTTTCATGGCCGCTGCGGGACTCTCTGGCAAACCCCCGCCGCACTCGATAGCCGG
AAGTCGTCCTGCCTTCGCCTCTAGGAAGCGGAAGTGCAGGGGCAGCTGGCAACTGGGTTA
TTGCTTTGAGAAACCGGCTTGTGAGGAGCGGCGGGAAAGGCGCGTGTCGGCTTCTCACTG
GCGCAGCCTCCCCGGCGATCGCCGCTGCTCCGCCCTGCCCAGGCGTCGTT
1 EXON 1 36,244,070 36,244,161 - 1 92
GCAGACACCGGAGTGGACGAAGCGCGGCCCGGGCATGTGCAGCCGGGGGGATGCGAACAC
TGCGGATGCCGCGGCTGCGCGGCGGGTGACAG
INTRON 1 - 2 36,234,943 36,244,069 9,127
GTACCTCGGGTGGCGTGGGGAGGCC..........CCTTCTCTTCTTTTTCCCTGTGTAG
2 EXON 2 36,234,807 36,234,942 1 2 136
GGCTCCGTTACAACATGAGACTCCTGATTGCACTGGCCTTACCGTGCCTGTTTTCCTTAG
CAGAAGCCAATTCAAAAGCCATTACCACGTCTCTCACCACAAAGTGGTTTTCTGCCCCAC
TGCTGCTGGAAGCCAG
INTRON 2 - 3 36,230,741 36,234,806 4,066
GTAAGGAGGATTCTCTCCTCAGATG..........CTGACATGTCCCACTTTTCTTCCAG
3 EXON 3 36,230,658 36,230,740 2 1 83
TGAGTTCTTAGCAGAAGACAGTCAAGAGAAATTTTGGAGTTTTGTAGAAGCCACTCAAAA
CATTGGATCATCAGATCATCACG
INTRON 3 - 4 36,227,615 36,230,657 3,043
GTAAAATTGAAGCCAATACTTGTTT..........TCCGGTCGCTGTGCTTTTTCCACAG
4 EXON 4 36,227,484 36,227,614 1 0 131
ATACTGATCATTCCTATTACGATGCCGTATTGGAAGCTGCGTTTCGCTTCCTGTCCCCTC
TGCAGCAGAATTTGTTGAAGTTTTGTCTCTCTCTCCGTTCCTACTCAGCCTCAATTCAAG
CCTTCCAGCAG
INTRON 4 - 5 36,221,325 36,227,483 6,159
GTAAGAAGACCTCATGTGTCTAGGG..........GAATGTGTATTTGTCTTCCTGACAG
5 EXON 5 36,221,212 36,221,324 0 2 113
ATAGCAGTTGACGAGCCTCCACCAGAAGGGTGCAAGTCGTTTCTCTCAGTGCATGGAAAG
CAGACTTGTGATCTAGACACTCTGGAGAGCCTTCTGCTGACTGCCGCTGACAG
INTRON 5 - 6 36,216,307 36,221,211 4,905
GTCGGTTGTGTTCTTCACTCAATGT..........TTCTTAATTGAATATTTACTTCCAG
6 EXON 6 36,216,132 36,216,306 2 0 175
ACCGAAACCATTATTGTTCAAAGGAGATCACAGATATCCCTCATCAAATCCTGAGAGTCC
AGTGGTCATCCTTTATTCTGAGATTGGCCATGAAGAATTTTCTAATATTCACCACCAACT
TATATCAAAAAGCAACGAAGGCAAAATTAATTATGTATTCCGACATTACATATCT
INTRON 6 - 7 36,211,487 36,216,131 4,645
GTAAGTATTGACTTATTTTACAATT..........GGTGGAACTCTTGCTCTATTTGCAG
7 EXON 7 36,211,397 36,211,486 0 0 90
AATCCCAGCAAGGAGCCGGTTTACCTTTCTGGCTATGGAGTGGAACTGGCGATCAAGAGC
ACGGAGTACAAGGCCAAGGATGATACTCAG
INTRON 7 - 8 36,210,065 36,211,396 1,332
GTGAAAGGTGAATTTGTAAAAATAA..........ACATGCCTCTACTATGTCTTTATAG
8 EXON 8 36,209,986 36,210,064 0 - 79
GAACTGAGGTAAACGCCACGGTCATCGGGGAGAGCGACCCTATTGATGAAGTGCAGGGAT
TCCTCTTTGGAAAATTAAG
INTRON 8 - 9 36,208,043 36,209,985 1,943
GTATGTTGATTCATGTTGCTGTGCA..........AGAAGAGTCGGTTCTGTTTCTGTAG
9 EXON 9 36,207,942 36,208,042 - - 101
AGAACTGTACCCGGCCTTGGAAGGACAGCTGAAAGAGTTCCGGAAGCACCTTGTGGAGAG
CACCAACGAGATGGCCCCCCTGAAAGTCTGGCAGCTGCAAG
INTRON 9 - 10 36,202,879 36,207,941 5,063
GTAATGGGCGCTCAGCTCACTTGAG..........TAATGTCACATGTGCCGTTGTGCAG
10 EXON 10 36,202,779 36,202,878 - - 100
ATCTCAGCTTCCAGACTGCTGCCCGAATCTTGGCTGCTTCTGGGGCATTATCTCTGGTGG
TGATGAAGGACATTAGTCAGAACTTTCCTACCAAGGCCAG
INTRON 10 - 11 36,201,766 36,202,778 1,013
GTATGTGCTAAGGTTTTGGTACATC..........TGATCACACTTTTATCCTTTTTTAG
11 EXON 11 36,201,705 36,201,765 - - 61
AGCAATAACGAAAACGGCTGTGAGCGCGCAGCTTAGAGCGGAAGTGGAAGAGAACCAGAA
G
INTRON 11 - 12 36,197,636 36,201,704 4,069
GTATTGCTGACTGTTAGAAAGTACT..........TCCCTGCCTTTGTGTGTGCTTTCAG
12 EXON 12 36,197,544 36,197,635 - - 92
TATTTCAAGGGAACTATAGGATTACAGCCTGGAGACTCAGCGCTCTTCATCAATGGACTT
CATATCGATTTAGACACCCAGGATATATTCAG
INTRON 12 - 13 36,196,001 36,197,543 1,543
GTATGGAAAATATTTCTATTCTCTC..........ACAAGTAACCTTGCTTTTCCTGCAG
13 EXON 13 36,195,850 36,196,000 - - 151
TCTGTTTGATACATTGAGGAATGAAGCCCGTGTAATGGAGGGTCTGCACAGGCTGGGAAT
AGAAGGCCTTTCTCTACATAATATTTTGAAGCTGAACATCCAGCCCTCTGAGACTGACTA
CGCAGTAGACATCAGGAGTCCTGCTATTTCC
INTRON 13 - 14 36,192,506 36,195,849 3,344
GTGAGTATTCATTCTGAGTGGTCAT..........TTGTTTTTGTTTTTTATCATTCAAG
14 EXON 14 36,192,386 36,192,505 - - 120
TGGGTCAACAACCTAGAGGTCGATAGCCGATATAACTCATGGCCTTCAAGCTTACAGGAG
TTACTCCGCCCCACGTTTCCTGGCGTCATACGGCAGATCAGAAAGAACCTGCATAACATG
INTRON 14 - 15 36,191,615 36,192,385 771
GTAAGTAGGGCGCTTGCTGCTGTCC..........GTTCTTTTTCCTTTTCCTCTGACAG
15 EXON 15 36,191,529 36,191,614 - - 86
GTTTTCATTATCGATCCTGTACACGAGACCACAGCCGAGTTGATTAGCATCGCCGAGATG
TTCCTCAGCAATCACATACCGCTAAG
INTRON 15 - 16 36,185,969 36,191,528 5,560
GTAACACTGCGCTCATTAGCCGAGC..........CCCCTTTTTCTGCTCCCCTCTGCAG
16 EXON 16 36,185,833 36,185,968 - - 136
GATTGGTTTTATCTTTGTGGTCAATGATTCTGAAGATGTTGATGGGATGCAAGATGCTGG
AGTCGCTGTTCTGAGAGCGTATAATTATGTGGCTCAGGAAGTGGATGGCTATCACGCCTT
CCAGACTCTCACACAG
INTRON 16 - 17 36,184,488 36,185,832 1,345
GTATGTTTTTACCCCAAATGGCAAA..........TGGTTCCCTGCTTTTCTTTCCTTAG
17 EXON 17 36,184,356 36,184,487 - - 132
ATCTATAACAAGGTGAGGACTGGAGAGACAGTGAAAGTGGAGCATGTGGTCAGTGTCTTG
GAGAAGAAGTACCCGTACGTGGAAGTGAATAGCATTCTGGGAATTGATTCTGCTTATGAT
CAGAATCGGAAG
INTRON 17 - 18 36,182,635 36,184,355 1,721
GTAACACGTTCTTTGGAACTTCTTA..........CTTTTTCTTGTCCTTTGTTTTCTAG
18 EXON 18 36,182,470 36,182,634 - - 165
GAAGCAAGAGGCTACTATGAGCAGACTGGAGTAGGCCCCCTGCCTGTTGTCCTGTTCAAT
GGAATGCCCTTTGAAAAGGAGCAGTTAGACCCGGATGAGCTGGAAACCATCACAATGCAC
AAGATCTTGGAGACAACCACCTTCTTCCAAAGAGCTGTGTACTTG
INTRON 18 - 19 36,179,680 36,182,469 2,790
GTGAGTGATATTCTCACACGAGCTT..........CTGCCCCTTTTCTTTTTTCATACAG
19 EXON 19 36,179,559 36,179,679 - - 121
GGTGAGCTGTCCCATGATCAAGATGTGGTAGAGTACATCATGAATCAGCCAAATGTTGTT
CCAAGAATCAACTCTAGGATTCTGACAGCTAAGCGAGAGTATCTGGACCTAACAGCAAGC
A
INTRON 19 - 20 36,177,617 36,179,558 1,942
GTAAGGAACATTTCAGTAGCAACTC..........TCAGTTTTTCCTGTTTTTCCACCAG
20 EXON 20 36,177,518 36,177,616 - - 99
ATAATTTTTATGTGGATGACTTTGCCAGATTTTCTGCCTTGGACTCTCGGGGCAAGACGG
CTGCTATTGCCAACAGTATGAACTATCTGACGAAAAAAG
INTRON 20 - 21 36,176,328 36,177,517 1,190
GTAACCCACTTGGGCTTGATTTGGT..........GTTTGTTGTCCTTGTTTCTCTACAG
21 EXON 21 36,176,233 36,176,327 - - 95
ATGATTCTTTTATTAGACCAGTGACTTTTTGGATTGTTGGAGATTTTGATAGCCCTTCTG
GGCGGCAGCTACTATATGATGCCATTAAACATCAG
INTRON 21 - 22 36,175,103 36,176,232 1,130
GCAAGTGTCTCAGATTTCATTCTGG..........CTCTTATCTCCCCTGTTTTAAATAG
22 EXON 22 36,174,896 36,175,102 - - 207
AAAACCAGTAACAATGTTAGGATAAGTATGATCAACAATCCCAGCCAAGAGATCAGTGAC
TCAAGCACCCCCATCTTCAGAGCCATCTGGGCAGCTCTCCAAACACAGACCTCCAACTCT
GCTAAGAACTTCATCACCAAGATGGCCAAAGAGGAGACGGCAGAGGCCCTGGCTGCAGGA
GTGGACATTGCGGAATTCTCTGTCGGG
INTRON 22 - 23 36,174,211 36,174,895 685
GTAAGGCTCGCAGGTTCCGAGGCTA..........TTCCTTAAAAATGATTACTTCCTAG
23 EXON 23 36,174,079 36,174,210 - - 132
GGCATGGATGTCAGTCTTTTTAAAGAGGTCTTTGAGTCTTCCAGAATGGATTTCATTTTG
TCTCATGCCCTGTACTGCAGGGATGTTCTGAAGCTGAAGAAGGGACAGCGAGTGGTGATC
AGCAACGGAAGG
INTRON 23 - 24 36,173,566 36,174,078 513
GTGAGCACTTGCTGGGCTGTGAGCC..........TGCCCTCCCCCTCCTTACCTCACAG
24 EXON 24 36,173,435 36,173,565 - - 131
ATCATTGGGCCTCTGGAGGACAATGAGCTCTTCAACCAAGATGATTTCCACCTCCTGGAA
AATATCATCCTGAAAACATCGGGACAGAAAATAAAGTCTCATATCCAACAGCTTCGAGTA
GAAGAAGACGT
INTRON 24 - 25 36,170,295 36,173,434 3,140
GTAAGTTTTATACCTAGTAACGAGT..........AAAATTTCATAACTTCATCTTTTAG
25 EXON 25 36,170,199 36,170,294 - - 96
GGCCAGTGATTTGGTAATGAAGGTGGATGCTCTCCTGTCAGCACAACCCAAAGGAGAGGC
GAGGATCGAGTACCAGTTCTTTGAGGATAAACACAG
INTRON 25 - 26 36,165,612 36,170,198 4,587
GTACAGTTGTTGCTGCACTAACGCA..........TCTTTTGATTTTTTTTTTCTCTCAG
26 EXON 26 36,165,509 36,165,611 - - 103
TGCAATTAAGCTGAAGCCCAAAGAAGGAGAGACATACTATGATGTGGTAGCCGTTGTTGA
CCCTGTCACACGAGAAGCACAGAGGCTCGCCCCCTTGCTCTTG
INTRON 26 - 27 36,164,524 36,165,508 985
GTAGGCCTGCTGTGGAGGTGTTCAC..........TTTGTCATCTGGTTTGCTTTTTTAG
27 EXON 27 36,164,444 36,164,523 - - 80
GTTTTGACTCAGCTGATAAACATGAATCTAAGAGTATTTATGAATTGCCAATCCAAGCTT
TCCGACATGCCTTTAAAAAG
INTRON 27 - 28 36,163,411 36,164,443 1,033
GTAAAATGCCATTTAAGGAACACTG..........AACTAACACTTGCGTTTCTTTTCAG
28 EXON 28 36,163,221 36,163,410 - - 190
CTTTTACCGCTACGTCTTAGAGCCGGAGATTTCTTTCACTGCAGACAGCAGCTTTGCTAA
GGGACCGATAGCAAAGTTTCTGGATATGCCACAGTCTCCGCTGTTTACTTTGAATCTGAA
CACACCTGAGAGTTGGATGGTAGAATCTGTCAGAACACCATATGATCTGGATAATATTTA
TCTAGAAGAG
INTRON 28 - 29 36,162,364 36,163,220 857
GTAGGGATGTAATTGTTCTCGACTA..........ATGTGCTTTAACTCTGGTCTTTCAG
29 EXON 29 36,162,205 36,162,363 - - 159
GTGGAGAGTATAGTGGCTGCTGAGTACGAGCTGGAATATCTGTTACTAGAAGGTCATTGT
TACGACATCACCACAGGCCAGCCCCCTCGAGGACTACAGTTCACTTTAGGAACTTCAGCC
AACCCAACAATTGTGGACACAATTGTGATGGCCAATCTG
INTRON 29 - 30 36,161,762 36,162,204 443
GTAAGTAATCAGTTTATTGATAGTA..........AGCCTGTACTCTGTTTGTGTCCTAG
30 EXON 30 36,161,676 36,161,761 - - 86
GGATATTTTCAGCTCAAAGCCAATCCGGGAGCCTGGATTCTGAGACTGAGGAAGGGGCGC
TCAGATGACATTTATAGGATCTACAG
INTRON 30 - 31 36,160,027 36,161,675 1,649
GTAGGACAAGGAGATGGCTTCATTG..........TTTCTCTGTCTTACTTGTCTCTAAG
31 EXON 31 36,159,942 36,160,026 - - 85
CCATGATGGTACAGATTCCCCTCCTGATGCAAACGACGTTGTTGTCATCCTCAATAACTT
CAAGAGCAAGATCATCAAAGTGAAG
INTRON 31 - 32 36,158,197 36,159,941 1,745
GTGAGTCTGCTCGGCTTTGTCAGGG..........TCAGACCTGTCACATACAATTGCAG
32 EXON 32 36,158,108 36,158,196 - - 89
GTTCAGAAGAAGGCAGACATGGCTAATGAAGACTTGCTGAGTGATGGGACAAATGAGAAC
GAGTCTGGATTCTGGGACTCATTCAAGTG
INTRON 32 - 33 36,157,502 36,158,107 606
GTAAGTCGGCATCATGGTGAACAGC..........GCTGTTTTTAATTATGTCATCACAG
33 EXON 33 36,157,400 36,157,501 - - 102
GGGCTTCTCAGGACAGAAGGCTGAAGAAGTGAAGCAAGATAAAGATGACATAATCAATAT
TTTCTCTGTTGCATCTGGTCATCTCTACGAAAGATTTCTTCG
INTRON 33 - 34 36,156,312 36,157,399 1,088
GTTAGTTTTCACTATTTGTTATGTA..........AATAATTATTTGTTTTGTTTGGCAG
34 EXON 34 36,156,227 36,156,311 - - 85
CATCATGATGCTCTCAGTCCTGAAGAATACCAAGACTCCTGTGAAGTTCTGGTTCTTGAA
GAACTACTTGTCCCCCACATTTAAG
INTRON 34 - 35 36,155,256 36,156,226 971
GTTTGTTCATAGGGAAAAGGAAAAC..........TTGTTGTTCCCTGTGTCTAAACTAG
35 EXON 35 36,155,073 36,155,255 - - 183
GAGTTTATACCTTACATGGCCAAAAAATACAATTTCCAGTATGAGCTTGTTCAGTACAAA
TGGCCGCGGTGGCTTCACCAGCAGACGGAGAAGCAGCGAATCATCTGGGGCTACAAGATC
CTCTTCCTGGACGTGCTTTTCCCGCTGGTTGTTGACAAGTTCCTCTTTGTGGATGCTGAT
CAG
INTRON 35 - 36 36,151,795 36,155,072 3,278
GTGAGCTTGCTCGGGTGGGGGTAAC..........AAACCGTTTGTTTTCTTTACTGCAG
36 EXON 36 36,151,634 36,151,794 - - 161
ATTGTACGGACAGATCTGAAGGAGTTAAGAGATTTCAATTTGGATGGTGCGCCTTACGGT
TACACTCCCTTCTGCGACAGCAGGAGAGAGATGGATGGCTACCGCTTCTGGAAGTCAGGG
TACTGGGCCAGTCATTTGGCTGGACGAAAGTATCACATCAG
INTRON 36 - 37 36,150,160 36,151,633 1,474
GTACTGAGAGGGTGCCCTGCTTATG..........TAACAAGTGTCTCCTCTCCACTCAG
37 EXON 37 36,150,045 36,150,159 - - 115
TGCGCTGTATGTCGTGGATCTGAAGAAGTTTAGGAAAATAGCTGCTGGAGACAGACTCAG
GGGACAGTACCAAGGTCTGAGCCAGGATCCCAACAGTCTTTCAAATCTTGATCAA
INTRON 37 - 38 36,146,742 36,150,044 3,303
GTAAGTGACCGTTGACATTACACAT..........GTGTTTCATTTTCTTTACCAAACAG
38 EXON 38 36,146,625 36,146,741 - - 117
GATTTGCCCAATAACATGATCCATCAGGTGCCAATCAAATCGCTCCCTCAGGAGTGGCTT
TGGTGTGAAACGTGGTGTGACGACGCCTCTAAGAAGCGGGCAAAGACCATCGACCTG
INTRON 38 - 39 36,146,186 36,146,624 439
GTGAGCTGCCCTCCCTGCCCTGGGA..........CTGAGGTGTGCTTGTGTGCTTGCAG
39 EXON 39 36,146,032 36,146,185 - - 154
TGTAATAATCCCATGACTAAGGAGCCCAAACTGGAGGCTGCCGTGCGGATCGTCCCTGAG
TGGCAAGACTACGACCAGGAGATCAAGCAGCTGCAGACCCTCTTCCAAGAGGAGAAGGAG
CTGGGGACCCTGCATACAGAGGAGACGCAGGAAG
INTRON 39 - 40 36,144,252 36,146,031 1,780
GTCAGTGCGAGGCTGACTGAGGATA..........CTCACGGTCTGTGTTCTTTCCCCAG
40 EXON 40 36,143,486 36,144,251 - - 766
GCTCTCAGAAGCATGAGGAATTATGATCTCTGGAGGAAGATGGGAAACCCACCTTGACAG
TTTGGACTAACTGCTGTTTTCTCTGATCTTTCGATACGACTGCTGATGAACGGATTGGGC
AGGTGTACCACACCTATTGATCTGAGCATTGATTTAGACTACTGCACCCTAGTGGGTGCT
AGATCCTTGGGGCTAAGGCTCTGTTGGATTTGTACCTCAGAGGAAGACAAGTGGCTGGTC
TTCTGGGACTCTTCTTCTCACCAGAGGGAGAAATGCCGGCAGCAACTGCAAGAAGCCCAG
TCCTTCGGTGCCCACAGCCCAGAGCACACACTGCTGTGCTGGCCCAGAAGCTGGGCAGAA
AGGTCACCATGTTCTTCCTTACCTCAGTTTACCTGCAGCCCTTGCTGCAGTGCAGATGCC
CACCCTGTACCAGGTCAGGCCGGCAGATGCTTCATCCATGCCTCAAGGTCTACGCCAACA
TGCTTCTCACGTCTCTTCCCCTCCCCGCCCCCTTCCCCAAGCACTAGGCTTGTTGTTTAA
TGGAGCCCAACCAATAATCATGTGTCTTCAGGGTTGGCTCAGTGCAGTTGCTAAGCAAAT
CAGTCTTCAGGAGAAACGGGGTGGTGTGGATAAGGCTGGAAGAAATGGCAGGTAGTGGAG
AGTGTTGGGGTGTTCGATGGAAGACAAAAACATGGACCGTTCTCTTCAGTCTAGTACCCA
GTGAACTGTCCAGGTAATTGTTTTGTAAACAATTTTTCTATTTATG
3' upstream sequence
AAAATGTGTGCTTTTTCTTCTTACTTTCTAAAAAGCTGTTGGTTATCAGTTTCCTGGCTG
GGCACAGGCGTCCTGAGTCCCTCGGTGACCGCTCTCAGCGTGCTCAGCCTCCGTCTGGAT
GCACCATACTGTCTGCCCTTTCCCTTGTAGAGTTTTCTCTCAGACCCAGGGGATAACTTT
GGGTGTTTCTTCCCCCAAATGCTCTCAGACCTGTGACCAGGAATGACTCTGTCTCTGGAA
CTCGGTTTCCTACACTCTGTCTTTCCCTTGTGCTTTGGCTCTGAGGGTCCCCTTTGGCTT
TCGAGACTTGCCAAGGTCTGGTCCAGTTCTAAGGTACTGCTGCTGTCTGAAGCAGCACCC
TTCACTGCTTTGTGTTCACAGCCACAGCCCAGCATCACCTCAGTAGCAGCCTGGGCTGAG
GAGCCTTCCACGTGTTGTTAACCTGGCTGGACAGGTGTGGGTGTGTGGTGTCATCTCTGC
CCAGGACTCAGGGATCTACAGCAGAGTGTTAGTGTTGCTGGGCACAGGGTGTGGCTCAGT
GGCAGACAGAGTGCTTGTCTAGCAAGCCCAAGGCCTTCTGTCTGGTACTGTATCTCCCCA
CCCCCCCCATCCCCCAAAAAAAGACTGAATATGAGGAATGAGTACTGTGGGTAACTAAGT
TCTTGCCTGTCCAAGCTAGGTAATATGTGTGTTACCATGGAAGAATGGCCTACAGGAGCC
ACAGTTGGGGATTTGAGTGGGCAATTGTTAAGTAATAAGTAGAGACAGAAAACTGGATTG
GGAATTCAGAGAACCAGCATTAACCCCCTTACCTCGTCAGCTGGAGCTCCCCCTGAGAGT
CCTGGGCAGAGCACAAGTGTCCCCTCAGGTCAGGAGTCCACATAAGAGAACAAAGAGCAG
CACTAAAAACAACATCATTTAGTTCGGTGCTCACGACACCCCAGAAACCAGCTGGGGGGC
TGCTACCATCGGTCGGTCAGCAGGGTTTTCTCCCTCTCCC..........

Sequence Detail Report

Gene Symbol (Gene ID) Uggt1 (ENSMUSG00000037470)
Transcript ID ENSMUST00000174266
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 266 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information