MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Smarca2 (ENSMUSG00000024921)

Cross Reference

EMBL	AC118249, AC118472
GO	GO:0000790, GO:0001105, GO:0005515, ...show all
goslim_goa	GO:0000228, GO:0000988, GO:0003674, ...show all
MGI_trans_name	Smarca2-015
OTTP	OTTMUSP00000058209
OTTT	OTTMUST00000104081
UniParc	UPI00024675EF
Uniprot/SPTREMBL	H3BLI4
Vega_transcript	OTTMUST00000104081, Smarca2-015
Vega_translation	222487, OTTMUSP00000058209

Definition

protein_id:ENSMUSP00000135800
translation:

MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDP
VKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEG
NSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH
NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESE

Chromosome

Length
Position(start - end)

24,449
26,749,855 - 26,774,305

Orient to Chromosome

plus

Link

Location : (19:26749855-26774305)
/

Detail Map

name	Smarca2 (ENSMUSG00000024921)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Smarca2 note : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]

name	4931403E22Rik (ENSMUSG00000093772)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : 4931403E22Rik note : RIKEN cDNA 4931403E22 gene [Source:MGI Symbol;Acc:MGI:1918192]

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000025862

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176030

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000099537

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176769

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175791

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176698

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177252

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176475

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000112637

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175842

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175953

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176731

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177116

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177484

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS29720.1 RefSeq_peptide:NP_035546 RefSeq_mRNA:NM_011416.2 RefSeq_mRNA_predicted:XM_006527285 RefSeq_peptide_predicted:XP_006527348.1 Vega_transcript:OTTMUST00000104062 Vega_transcript:Smarca2-001 Uniprot/SPTREMBL:F2Z4A9 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0000790 GO:GO:0001105 GO:GO:0001105 GO:GO:0003682 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0007286 GO:GO:0008152 GO:GO:0008285 GO:GO:0008285 GO:GO:0016514 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0043231 GO:GO:0044212 GO:GO:0044212 GO:GO:0045111 GO:GO:0045111 GO:GO:0045892 GO:GO:0045892 GO:GO:0045893 GO:GO:0045893 GO:GO:0045944 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-001 Vega_translation:222477 Vega_translation:OTTMUSP00000058197 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058197 OTTT:OTTMUST00000104062 UniParc:UPI000042B0CA
definition	note : transcript_id=ENSMUST00000025862 protein_id : ENSMUSP00000025862 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_mRNA_predicted:XM_006527281.2 RefSeq_mRNA_predicted:XM_006527282.2 RefSeq_mRNA_predicted:XM_006527283.2 RefSeq_mRNA_predicted:XM_006527284.2 RefSeq_mRNA_predicted:XM_006527286.1 RefSeq_peptide_predicted:XP_006527344.1 RefSeq_peptide_predicted:XP_006527345.1 RefSeq_peptide_predicted:XP_006527346.1 RefSeq_peptide_predicted:XP_006527347.1 RefSeq_peptide_predicted:XP_006527349.1 Vega_transcript:OTTMUST00000104061 Vega_transcript:Smarca2-003 Uniprot/SPTREMBL:H3BLH0 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-003 Vega_translation:222478 Vega_translation:OTTMUSP00000058196 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058196 OTTT:OTTMUST00000104061 UniParc:UPI00024675E9
definition	note : transcript_id=ENSMUST00000176030 protein_id : ENSMUSP00000135784 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104063 Vega_transcript:Smarca2-002 Uniprot/SPTREMBL:E9QAB8 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-002 Vega_translation:222479 Vega_translation:OTTMUSP00000058198 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058198 OTTT:OTTMUST00000104063 UniParc:UPI0000D8ACEB
definition	note : transcript_id=ENSMUST00000099537 protein_id : ENSMUSP00000097135 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNRSESVIISIGAWETWRKTSCFSVTTHRHSTWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104064 Vega_transcript:Smarca2-005 Uniprot/SPTREMBL:H3BJK2 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-005 Vega_translation:222480 Vega_translation:OTTMUSP00000058199 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058199 OTTT:OTTMUST00000104064 UniParc:UPI00024675EB
definition	note : transcript_id=ENSMUST00000176769 protein_id : ENSMUSP00000135017 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104079 Vega_transcript:Smarca2-010 Uniprot/SPTREMBL:H3BKJ3 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-010 Vega_translation:222482 Vega_translation:OTTMUSP00000058207 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058207 OTTT:OTTMUST00000104079 UniParc:UPI00024675ED
definition	note : transcript_id=ENSMUST00000175791 protein_id : ENSMUSP00000135412 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104073 Vega_transcript:Smarca2-011 Uniprot/SPTREMBL:H3BKJ3 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-011 Vega_translation:222483 Vega_translation:OTTMUSP00000058204 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058204 OTTT:OTTMUST00000104073 UniParc:UPI00024675ED
definition	note : transcript_id=ENSMUST00000176698 protein_id : ENSMUSP00000134914 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104080 Vega_transcript:Smarca2-016 Uniprot/SPTREMBL:H3BJI1 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-016 Vega_translation:222484 Vega_translation:OTTMUSP00000058208 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058208 OTTT:OTTMUST00000104080 UniParc:UPI00024675EE
definition	note : transcript_id=ENSMUST00000177252 protein_id : ENSMUSP00000134995 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006527351.1 RefSeq_peptide_predicted:XP_006527352.1 Vega_transcript:OTTMUST00000104074 Vega_transcript:Smarca2-009 Uniprot/SPTREMBL:H3BK47 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-009 Vega_translation:222485 Vega_translation:OTTMUSP00000058205 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058205 OTTT:OTTMUST00000104074 UniParc:UPI00001ECDC7
definition	note : transcript_id=ENSMUST00000176475 protein_id : ENSMUSP00000135248 translation : MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS37945.1 RefSeq_peptide:NP_080279 RefSeq_mRNA:NM_026003.2 RefSeq_mRNA_predicted:XM_006527290 RefSeq_mRNA_predicted:XM_006527291 RefSeq_peptide_predicted:XP_006527354.1 Vega_transcript:OTTMUST00000104066 Vega_transcript:Smarca2-007 Uniprot/SPTREMBL:Q9D007 UCSC:uc008hbr.1 Fantom:2610209L14 EMBL:AC118249 EMBL:AC118472 EMBL:AK011935 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-007 Vega_translation:222486 Vega_translation:OTTMUSP00000058200 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:BAB27925.1 OTTP:OTTMUSP00000058200 OTTT:OTTMUST00000104066 UniParc:UPI00000224A2
definition	note : transcript_id=ENSMUST00000112637 protein_id : ENSMUSP00000108256 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104081 Vega_transcript:Smarca2-015 Uniprot/SPTREMBL:H3BLI4 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-015 Vega_translation:222487 Vega_translation:OTTMUSP00000058209 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058209 OTTT:OTTMUST00000104081 UniParc:UPI00024675EF
definition	note : transcript_id=ENSMUST00000175842 protein_id : ENSMUSP00000135800 translation : MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104082 Vega_transcript:Smarca2-017 Uniprot/SPTREMBL:H3BJM2 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-017 Vega_translation:222488 Vega_translation:OTTMUSP00000058210 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058210 OTTT:OTTMUST00000104082 UniParc:UPI00024675F0
definition	note : transcript_id=ENSMUST00000175953 protein_id : ENSMUSP00000135042 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLP

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104067 Vega_transcript:Smarca2-006 Uniprot/SPTREMBL:H3BKN5 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-006 Vega_translation:222489 Vega_translation:OTTMUSP00000058201 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058201 OTTT:OTTMUST00000104067 UniParc:UPI00024675F1
definition	note : transcript_id=ENSMUST00000176731 protein_id : ENSMUSP00000135460 translation : GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRSESVIISIGAWETWRKTSCFSVTTHRHSTWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104083 Vega_transcript:Smarca2-018 Uniprot/SPTREMBL:Q99KH6 UCSC:uc012bjx.1 EMBL:AC118249 EMBL:AC118472 EMBL:BC004653 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-018 Vega_translation:222490 Vega_translation:OTTMUSP00000058211 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:AAH04653.1 OTTP:OTTMUSP00000058211 OTTT:OTTMUST00000104083 UniParc:UPI00000E78BF
definition	note : transcript_id=ENSMUST00000177116 protein_id : ENSMUSP00000135116 translation : MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104077 Vega_transcript:Smarca2-014 Uniprot/SPTREMBL:Q99KH6 UCSC:uc012bjx.1 EMBL:AC118249 EMBL:AC118472 EMBL:BC004653 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-014 Vega_translation:222491 Vega_translation:OTTMUSP00000058212 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:AAH04653.1 OTTP:OTTMUSP00000058212 OTTT:OTTMUST00000104077 UniParc:UPI00000E78BF
definition	note : transcript_id=ENSMUST00000177484 protein_id : ENSMUSP00000135869 translation : MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name
type	misc_feature
link
xref
definition	note : contig AC118472.8 1..207146(-1)

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104065 Vega_transcript:OTTMUST00000104065 MGI_trans_name:Smarca2-004 OTTT:OTTMUST00000104065
definition	note : processed_transcript note : transcript_id=ENSMUST00000175935

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104078 Vega_transcript:OTTMUST00000104078 MGI_trans_name:Smarca2-019 OTTT:OTTMUST00000104078
definition	note : retained_intron note : transcript_id=ENSMUST00000176700

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104069 Vega_transcript:OTTMUST00000104069 MGI_trans_name:Smarca2-008 OTTT:OTTMUST00000104069
definition	note : processed_transcript note : transcript_id=ENSMUST00000176494

name	4931403E22Rik (ENSMUSG00000093772)
type	misc_RNA
link	VEGA Ensembl MGI
xref	RefSeq_ncRNA:NR_045306 Vega_transcript:OTTMUST00000104068 Vega_transcript:OTTMUST00000104068 UCSC:uc029trw.1 Clone_based_vega_transcript:RP23-187N14.2-001 MGI_trans_name:4931403E22Rik-001 OTTT:OTTMUST00000104068
definition	note : processed_transcript note : transcript_id=ENSMUST00000177048

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000175842

Reports
substitution
cSNPs	1
Insertion	23
Deletion	40
SNPs	-1kb 26744822(c.-5033C>G), 26744982(c.-4873A>G), 26745145(c.-4710C>T), 26745209(c.-4646G>T), 26745237(c.-4618G>A), 26745243(c.-4612G>T), 26745253(c.-4602A>T), 26745339(c.-4516G>A), 26745414(c.-4441G>A), 26745640(c.-4215T>C), 26745689(c.-4166C>T), 26745820(c.-4035T>G), 26745845(c.-4010G>C), 26745908(c.-3947T>C), 26745928(c.-3927A>G), 26745946(c.-3909G>A), 26745960(c.-3895A>C), 26746094(c.-3761T>A), 26746132(c.-3723G>A), 26746634(c.-3221G>A), 26746687(c.-3168C>T), 26746943(c.-2912C>T), 26746951(c.-2904T>C), 26746952(c.-2903A>G), 26747032(c.-2823T>A), 26747033(c.-2822A>C), 26747035(c.-2820G>A), 26747336(c.-2519C>T), 26747342(c.-2513C>A), 26747345(c.-2510C>A), 26747536(c.-2319G>A), 26747579(c.-2276C>G), 26747706(c.-2149T>A), 26747884(c.-1971A>G), 26747952(c.-1903A>G), 26748753(c.-1102A>G), 26749207(c.-648G>A), 26749287(c.-568T>C), 5'UTR CDS 26774295(c.696G>A), 3'UTR INTRON 26750333(c.93+386T>A), 26750509(c.93+562A>T), 26751072(c.94-752T>C), 26751336(c.94-488A>C), 26751402(c.94-422T>G), 26751404(c.94-420T>C), 26751423(c.94-401T>C), 26751439(c.94-385C>T), 26751489(c.94-335C>T), 26751703(c.94-121A>G), 26751800(c.94-24T>C), 26751817(c.94-7T>C), 26752574(c.311+533A>G), 26752984(c.311+943A>C), 26753148(c.311+1107T>C), 26753321(c.311+1280A>G), 26753325(c.311+1284A>G), 26753413(c.311+1372T>G), 26753661(c.311+1620T>G), 26753870(c.311+1829C>T), 26753896(c.311+1855C>T), 26753966(c.311+1925T>A), 26753968(c.311+1927T>A), 26753970(c.311+1929A>T), 26753972(c.311+1931A>T), 26754083(c.311+2042C>G), 26755138(c.311+3097A>G), 26755139(c.311+3098T>C), 26755190(c.311+3149G>C), 26755245(c.311+3204C>T), 26755399(c.311+3358A>T), 26755413(c.311+3372G>A), 26755425(c.311+3384A>G), 26755517(c.311+3476C>T), 26755625(c.311+3584T>C), 26755688(c.311+3647T>C), 26755693(c.311+3652G>C), 26755699(c.311+3658T>C), 26755870(c.311+3829C>T), 26755892(c.311+3851C>T), 26756092(c.312-3786G>A), 26756117(c.312-3761C>T), 26756208(c.312-3670T>C), 26756241(c.312-3637T>C), 26756286(c.312-3592A>G), 26756482(c.312-3396G>A), 26756485(c.312-3393G>A), 26756554(c.312-3324C>T), 26756623(c.312-3255C>A), 26756679(c.312-3199T>C), 26756876(c.312-3002T>G), 26756882(c.312-2996A>C), 26756884(c.312-2994T>C), 26756964(c.312-2914T>C), 26756966(c.312-2912T>A), 26757008(c.312-2870T>C), 26757032(c.312-2846A>G), 26757170(c.312-2708T>C), 26757339(c.312-2539C>T), 26757467(c.312-2411A>G), 26757510(c.312-2368T>A), 26757562(c.312-2316C>G), 26757577(c.312-2301A>G), 26757578(c.312-2300C>T), 26757604(c.312-2274C>T), 26757659(c.312-2219C>T), 26757912(c.312-1966G>A), 26758328(c.312-1550C>T), 26758482(c.312-1396G>A), 26758514(c.312-1364G>A), 26758571(c.312-1307G>A), 26758576(c.312-1302G>A), 26758583(c.312-1295C>T), 26758602(c.312-1276A>G), 26758631(c.312-1247G>C), 26758818(c.312-1060C>A), 26758822(c.312-1056T>G), 26758858(c.312-1020A>G), 26758888(c.312-990C>T), 26758915(c.312-963T>A), 26759061(c.312-817T>C), 26759086(c.312-792T>C), 26759215(c.312-663T>G), 26759218(c.312-660T>G), 26759418(c.312-460G>A), 26759456(c.312-422C>T), 26759465(c.312-413G>T), 26759548(c.312-330C>T), 26759578(c.312-300G>A), 26759581(c.312-297C>T), 26759588(c.312-290A>T), 26759623(c.312-255C>T), 26759645(c.312-233G>A), 26759669(c.312-209A>G), 26759719(c.312-159A>G), 26759737(c.312-141G>A), 26759747(c.312-131T>G), 26759754(c.312-124A>T), 26759756(c.312-122G>A), 26759763(c.312-115A>C), 26760199(c.365+268T>C), 26760249(c.365+318C>A), 26760627(c.365+696C>G), 26760684(c.365+753C>T), 26760732(c.365+801A>T), 26760794(c.365+863C>A), 26760795(c.365+864C>A), 26760857(c.365+926A>G), 26761080(c.365+1149C>T), 26761173(c.365+1242C>T), 26761216(c.365+1285C>T), 26761276(c.365+1345A>G), 26761602(c.365+1671T>C), 26761634(c.365+1703G>A), 26761791(c.365+1860A>G), 26761915(c.365+1984C>G), 26762059(c.365+2128A>G), 26762139(c.365+2208C>A), 26762166(c.365+2235T>G), 26762236(c.365+2305C>T), 26762269(c.365+2338C>T), 26762281(c.365+2350T>C), 26762298(c.365+2367T>G), 26762331(c.365+2400A>C), 26762342(c.365+2411T>A), 26762648(c.365+2717G>T), 26762897(c.365+2966A>G), 26763434(c.365+3503T>C), 26763451(c.365+3520G>A), 26763735(c.365+3804G>A), 26763906(c.365+3975A>G), 26764161(c.365+4230C>T), 26764284(c.365+4353A>G), 26764423(c.365+4492A>C), 26764453(c.365+4522T>C), 26764763(c.365+4832T>C), 26764846(c.365+4915A>G), 26764847(c.365+4916A>G), 26764937(c.365+5006A>C), 26764940(c.365+5009A>T), 26765106(c.365+5175G>A), 26765165(c.365+5234T>C), 26765388(c.365+5457C>A), 26765829(c.366-5109G>T), 26765868(c.366-5070C>T), 26765913(c.366-5025C>G), 26766049(c.366-4889T>G), 26766065(c.366-4873A>G), 26766277(c.366-4661C>T), 26766343(c.366-4595C>A), 26766354(c.366-4584T>G), 26766360(c.366-4578T>C), 26766520(c.366-4418C>A), 26766523(c.366-4415A>T), 26766528(c.366-4410T>G), 26766530(c.366-4408T>A), 26766583(c.366-4355C>T), 26766632(c.366-4306C>T), 26766745(c.366-4193A>G), 26766758(c.366-4180T>G), 26766766(c.366-4172A>C), 26766839(c.366-4099G>A), 26766975(c.366-3963G>A), 26767015(c.366-3923T>C), 26767054(c.366-3884A>G), 26767180(c.366-3758C>G), 26767236(c.366-3702A>T), 26767430(c.366-3508C>T), 26767507(c.366-3431T>C), 26767516(c.366-3422G>A), 26767920(c.366-3018A>C), 26768112(c.366-2826A>T), 26768429(c.366-2509G>C), 26768494(c.366-2444A>T), 26768620(c.366-2318C>T), 26768848(c.366-2090C>T), 26769343(c.366-1595C>T), 26769636(c.366-1302C>T), 26770053(c.366-885A>G), 26770076(c.366-862G>A), 26770140(c.366-798A>G), 26770179(c.366-759T>C), 26770528(c.366-410G>A), 26770572(c.366-366G>T), 26770839(c.366-99G>A), 26771326(c.472-182T>C), 26771369(c.472-139C>T), 26771613(c.573+4T>C), 26771627(c.573+18A>G), 26771673(c.573+64T>A), 26771747(c.573+138T>G), 26771758(c.573+149T>C), 26771786(c.573+177T>G), 26771794(c.573+185A>C), 26771885(c.573+276T>C), 26772229(c.573+620T>C), 26772440(c.573+831T>C), 26773033(c.574-1140A>C), 26773280(c.574-893C>T), 26773321(c.574-852T>G), 26773495(c.574-678C>T), 26773684(c.574-489T>A), 26773706(c.574-467C>T), 26773707(c.574-466T>C), 26773838(c.574-335C>A), 26773839(c.574-334G>A), 26773874(c.574-299G>C), 26773907(c.574-266C>G), 26773942(c.574-231T>A), 26773960(c.574-213G>A), 26774043(c.574-130A>G), +1kb 26774315(c.10G>A), 26774513(c.208G>A), 26774692(c.387T>C), 26774837(c.532A>C), 26775062(c.757C>T), 26775226(c.921T>C), 26775369(c.1064A>G), 26775580(c.1275T>C), 26775640(c.1335G>A), 26775666(c.1361T>C), 26775684(c.1379C>T), 26775751(c.1446T>C), 26776002(c.1697G>A), 26776043(c.1738G>A), 26776069(c.1764T>C), 26776201(c.1896C>T), 26776231(c.1926A>G), 26776328(c.2023C>G), 26776395(c.2090T>C), 26776407(c.2102A>G), 26776585(c.2280G>A), 26776593(c.2288T>A), 26776597(c.2292A>G), 26776604(c.2299A>G), 26776672(c.2367C>A), 26776715(c.2410T>A), 26776720(c.2415T>A), 26776909(c.2604C>T), 26777083(c.2778A>G), 26777189(c.2884A>G), 26777559(c.3254T>C), 26777753(c.3448T>C), 26778119(c.3814A>G), 26778242(c.3937A>C), 26778313(c.4008G>T), 26778346(c.4041C>T), 26778400(c.4095A>G), 26778422(c.4117G>T), 26778432(c.4127C>A), 26778477(c.4172A>T), 26778598(c.4293T>G), 26778691(c.4386T>A), 26778744(c.4439T>C), 26778843(c.4538A>T), 26778902(c.4597T>C), 26778903(c.4598A>G), 26778969(c.4664G>A), 26778999(c.4694G>A), 26779139(c.4834C>T), 26779151(c.4846T>C), 26779212(c.4907T>C), 26779256(c.4951T>A), 26779258(c.*4953T>C),
Insertions	-1kb 26745450 (c.-4405_-4404insAGCAC), 26749235 (c.-621_-620dupAA), 5'UTR CDS 3'UTR INTRON 26750483 (c.93+536dupT), 26755014 (c.311+2983dupA), 26759224 (c.312-654_312-653insTCTT), 26761856 (c.365+1925dupG), 26762434 (c.365+2503_365+2504insT), 26764462 (c.365+4532_365+4533insGGGGG), 26764646 (c.365+4715dupA), 26764708 (c.365+4783_365+4785dupAAA), 26764717 (c.365+4786_365+4787insAA), 26766223 (c.366-4707dupT), 26766526 (c.366-4411dupC), 26768706 (c.366-2230_366-2228dupCAT), 26773767 (c.574-406_574-405insA), 26774006 (c.574-166_574-165dupAG), +1kb 26775522 (c.1217_1218insTT), 26776063 (c.1758_1759insTGAT), 26776491 (c.2186_2187insA), 26777596 (c.3291_3292insT), 26778064 (c.3759_3760insT), 26778071 (c.3766_3767insCT), 26779265 (c.4960_4961insC),
Deletions	-1kb 26745883 (c.-3971_-3970delAC), 26746045 (c.-3809_-3808delGG), 26747244 (c.-2610_-2609delAC), 26748383 (c.-1471delC), 26748605 (c.-1249_-1246delTTGT), 26748645 (c.-1209_-1207delCTT), 26748659 (c.-1195_-1193delCCC), 26748668 (c.-1186_-1180delCCCCAGC), 26749148 (c.-706delT), 26749382 (c.-472_-468delGGGTG), 26749475 (c.-379delA), 5'UTR CDS 3'UTR INTRON 26750265 (c.93+319delC), 26750551 (c.93+605_93+606delAC), 26750833 (c.93+887_93+888delGA), 26750933 (c.94-890_94-889delCT), 26751189 (c.94-618_94-615delGTGT), 26751371 (c.94-447_94-446delTG), 26753499 (c.311+1469delT), 26756391 (c.312-3484_312-3479delGTTCGT), 26759003 (c.312-874_312-872delCAG), 26760073 (c.365+149delG), 26761933 (c.365+2003_365+2012delGGGTGGGGGT), 26764331 (c.365+4401_365+4402delCC), 26765522 (c.366-5415delG), 26766106 (c.366-4831_366-4829delGGC), 26766490 (c.366-4447_366-4443delACCCC), 26767531 (c.366-3405delA), 26769909 (c.366-1028delC), 26769920 (c.366-1017_366-1016delTG), 26770249 (c.366-688delA), 26771299 (c.472-208_472-207delTC), 26772020 (c.573+415_573+418delAGTA), 26772452 (c.573+861_573+862delTT), 26773525 (c.574-647_574-644delAAAA), 26773550 (c.574-622delA), 26773569 (c.574-603_574-600delTTTG), 26773842 (c.574-330delT), +1kb 26778015 (c.3711_3712delAA), 26778703 (c.4399_4401delTAG), 26778860 (c.*4556delC),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	1
non-synonymous num	0
synonymous substitutions	26774295 (p.Ser232Ser),
non-synonymous substitutions
B6 transcript (ENSMUST00000175842)	MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDP VKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEG NSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESE
MSMv4 transcript	MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDP VKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEG NSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESE
homology	100.00 (235 / 235)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000175842


..........GCCCCCATAATTTCCCTTACAAGCAAGGGAAATCTTAAGTCTAACTCTTG
AAGTGCGAAAAGCATCGGGAAATATGGAGGGAATTGATTTCCATTAGAAAAAGCCCCTTA
GAAACCACAGAACATGAAGCCCTGCATATAGATGTGTTCCCGGTCTTTGGGGAGGAGGGA
AGATTTCGGTAGCTCTCTGCATTCCTGCATAAAAACCTTAACTTAAGGGGAATAATGGTC
AGTACTTTGTGTGTTTTCCTGTAACTCCAGAACGTAAATTTAATAGGAATCTGCAGTATT
AGCAGTTGTAATAAACATTTGTTTGACTAGTTCTGTTTGCAATTTAATTTGTTTTCCTTC
TTAGGTACTCACAGGCGTAGAGATTTAAAAGTCCAAATATCACAAGCTTATGTTTTGTTC
CCCGTTTTTTTTTTCAGAATGGGGGGGGGGGTAGAACAGAAATACTCTTTTCACAACCTC
CCCCTCCTCACAGATCCCACTGAAAAGAAAAAAAAAAAAACAGTGAAAAATTTTGCAGTA
TGAAAACCGAAAGTGAAGTATCACAGTTATTCGAGATTTTTTTTTATAGAGAAAAAATAA
CACTGTATTAAAATACAGGAACCTGAGAACATACACATTGCTTTTACTTACATGCATCTG
GGGGGGGGGGTGCGGGGGCGGGGGAGGGCGCGGGTGTTTTTCTTCTGTGTTAAAATCGTT
TTAGACTGCTCCAAAACCATGCAGCATATCTTTTCAGGGGAAAAAAAAAAAGACTAAGAT
GAAGCATAAAATACAACAACAACAAAAAATCTTTGCTTTAATCTTTAAAAAATACATTTG
AATATTCATTTGTTTTCTTATTGGCTTAATTGTTAAAAATGCAAGCAAGATTCAGCAACC
ACCTGAGCTAAAAATCTCTAATTCTGCTGCCTGGAATAATAAGGGGGGAACAATATGATA
AGTAGTTGTCAATATTAAAACAGGCTGGAGGAGGAAGGCTTGGGGCCTGG
TCGTAGGTAGAATGAAACAGCAGATTTGAGTATCCACAACCCTTCCAGTATTAAATTTTCAGTAAAATAAAATTACTTGTATATGAAAACATAGCCTTTCCCAGCTCTCTTTTTTTTCCTGATCAGCTGATGAAGAGACTAGCAGCTCGCTGCTTTGCCGGCTTGTTAATTTTATCCCCACTAACTGTGATTTCCGATAGCCGGCCTGCTGATAGTGGTAAG
GTAAATATCCTTTTTCGTTGCCGTC..........TCCCTCCTTTCTTTCCTGCTTACAG
GCCATCGAAGACGGCAATTTGGAAGAAATGGAAGAGGAGGTACGGCTTAAGAAGAGAAAAAGACGAAGAAATGTGGATAAAGACCCCGTGAAGGAAGATGTGGAAAAAGCGAAGAAAAGAAGAGGCCGCCCTCCGGCTGAGAAGTTGTCACCAAATCCCCCAAAACTAACGAAGCAGATGAACGCCATCATTGATACTGTGATAAACTACAAAGACAG
GTGAGCCCCTGGCTCCTTCCTCTCC..........TAGTGTTCTTTCTACTCTACTGCAG
GTGTAACGTGGAGAAGGTGCCCTGTAATTCTCAGTTGGAAATAGAAGGAAACAG
GTCAGGATCTGCCTTGTATTCCCCT..........TCTGTTTGTCTCCCCCATCCTGCAG
TTCAGGGCGACAGCTCAGTGAAGTCTTCATTCAGTTACCTTCCAGGAAAGACTTACCAGAATACTATGAATTAATTAGGAAGCCAGTGGATTTCAAAAAGATAAAG
GTAGATACTCTGTTCCCTGTTGTTC..........TGTTTTCACCCGAAATTCCCCTCAG
GAGCGAATCCGTAATCATAAGTATCGGAGCCTGGGAGACCTGGAGAAAGACGTCATGCTTCTCTGTCACAACGCACAGACATTCAACTTGGAAGGATCCCAG
GTACGTGTCAAGTTGTCGGAGACGT..........AACAGCTGACACTTTGGCCATTTAG
ATCTACGAAGACTCCATTGTCCTACAGTCAGTGTTTAAGAGTGCTCGGCAGAAAATTGCCAAAGAAGAAGAGAGTGAGGAAGAAAGCAATGAAGAAGAGGAAGAAGATGATGAAGAGGAGTCAGAGTCAGAGG
GTAAGTCCCATGCACCTGGCCCTTCCCACTCGAGGGGCTGTTTCCACAGACACTAAAGAC
TATATACTTGCCCCGCTTGCTTGTGTCCAGTTTTCTCTGCTGTTAAAATGAAGCACACCA
GCCATGGAGCTCAGGACTGCCCATGTGGCCTTTGGATGTTAGGATAACACTCGTGTACAC
AGCACCTGTCACTCCGGGCAAAGCATTATAGCATGGCTTGAGGAACATAGACTGTGAGGC
TCCATCCCAGTGTTTCTGGGTCAGAGAGGTCCTGCCCTCTACGTGTTCCCACAGGGCACT
GCTGGACCCAGGCCTTACTTAGACAGGCATCGATTTTCAAACTGATCTTAGTGCGCCTAT
TAATTTTGGTCTGCATAGAGACCTGACTTCACAAACATCATCTGGTTTATTGCTAATTAG
TGTAGGTGAATTGGAAGGTGAAAGGTATAGTCCCATAATCTATACGATGTGAAGATGTGT
GTTCCAGTTCTCTGATATTTTGTAGCATACATTTCTACACTTAACAGATCCCAAAACATT
AACGAATGCTTCAAACTGTCTTAATTTCACTGTTCCAATCAGGCCGTTTCCTTACATTTC
CCCAAAGAGATTGGAAGCCTCAGCTCACGTATTCTTTCTGCAGTGATCAAATCCCCCACC
CCCACTGAAATAGATCCAGCCGGTCCTGAGATCTACAAACATTGCGGGGATTGGCTTATG
TGGTAGACCCACCTTTTCGTGACTTATCCTCAAGTATGTGGAGTCATAGCCGTGGGCTGC
CTATTCCAGAAGTTCCTGAGGTGGCATAGCACGTCACACTCTTCTGAGCAGGAGCAGAAA
TGGCTGCAGTCTTCCTGACAATGCAATTGACAGTGTTAGAATGTCCTGTGTGGCTGCTAC
CACTGTACCCCCACCAAAGTCTGCCAACATGGCTTCACAGTGGCTCTCTCTGTTGTAGCG
CCCATCACTGGGGAACTGGTTAAATTGATTATAGAGTAGA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GCCCCCATAATTTCCCTTACAAGCAAGGGAAATCTTAAGTCTAACTCTTG AAGTGCGAAAAGCATCGGGAAATATGGAGGGAATTGATTTCCATTAGAAAAAGCCCCTTA GAAACCACAGAACATGAAGCCCTGCATATAGATGTGTTCCCGGTCTTTGGGGAGGAGGGA AGATTTCGGTAGCTCTCTGCATTCCTGCATAAAAACCTTAACTTAAGGGGAATAATGGTC AGTACTTTGTGTGTTTTCCTGTAACTCCAGAACGTAAATTTAATAGGAATCTGCAGTATT AGCAGTTGTAATAAACATTTGTTTGACTAGTTCTGTTTGCAATTTAATTTGTTTTCCTTC TTAGGTACTCACAGGCGTAGAGATTTAAAAGTCCAAATATCACAAGCTTATGTTTTGTTC CCCGTTTTTTTTTTCAGAATGGGGGGGGGGGTAGAACAGAAATACTCTTTTCACAACCTC CCCCTCCTCACAGATCCCACTGAAAAGAAAAAAAAAAAAACAGTGAAAAATTTTGCAGTA TGAAAACCGAAAGTGAAGTATCACAGTTATTCGAGATTTTTTTTTATAGAGAAAAAATAA CACTGTATTAAAATACAGGAACCTGAGAACATACACATTGCTTTTACTTACATGCATCTG GGGGGGGGGGTGCGGGGGCGGGGGAGGGCGCGGGTGTTTTTCTTCTGTGTTAAAATCGTT TTAGACTGCTCCAAAACCATGCAGCATATCTTTTCAGGGGAAAAAAAAAAAGACTAAGAT GAAGCATAAAATACAACAACAACAAAAAATCTTTGCTTTAATCTTTAAAAAATACATTTG AATATTCATTTGTTTTCTTATTGGCTTAATTGTTAAAAATGCAAGCAAGATTCAGCAACC ACCTGAGCTAAAAATCTCTAATTCTGCTGCCTGGAATAATAAGGGGGGAACAATATGATA AGTAGTTGTCAATATTAAAACAGGCTGGAGGAGGAAGGCTTGGGGCCTGG
1	EXON 1	26,749,726	26,749,947	-	0	222	TCGTAGGTAGAATGAAACAGCAGATTTGAGTATCCACAACCCTTCCAGTATTAAATTTTC AGTAAAATAAAATTACTTGTATATGAAAACATAGCCTTTCCCAGCTCTCTTTTTTTTCCT GATCAGCTGATGAAGAGACTAGCAGCTCGCTGCTTTGCCGGCTTGTTAATTTTATCCCCA CTAACTGTGATTTCCGATAGCCGGCCTGCTGATAGTGGTAAG
	INTRON 1 - 2	26,749,948	26,751,823			1,876	GTAAATATCCTTTTTCGTTGCCGTC..........TCCCTCCTTTCTTTCCTGCTTACAG
2	EXON 2	26,751,824	26,752,041	0	2	218	GCCATCGAAGACGGCAATTTGGAAGAAATGGAAGAGGAGGTACGGCTTAAGAAGAGAAAA AGACGAAGAAATGTGGATAAAGACCCCGTGAAGGAAGATGTGGAAAAAGCGAAGAAAAGA AGAGGCCGCCCTCCGGCTGAGAAGTTGTCACCAAATCCCCCAAAACTAACGAAGCAGATG AACGCCATCATTGATACTGTGATAAACTACAAAGACAG
	INTRON 2 - 3	26,752,042	26,759,877			7,836	GTGAGCCCCTGGCTCCTTCCTCTCC..........TAGTGTTCTTTCTACTCTACTGCAG
3	EXON 3	26,759,878	26,759,931	2	2	54	GTGTAACGTGGAGAAGGTGCCCTGTAATTCTCAGTTGGAAATAGAAGGAAACAG
	INTRON 3 - 4	26,759,932	26,770,937			11,006	GTCAGGATCTGCCTTGTATTCCCCT..........TCTGTTTGTCTCCCCCATCCTGCAG
4	EXON 4	26,770,938	26,771,043	2	0	106	TTCAGGGCGACAGCTCAGTGAAGTCTTCATTCAGTTACCTTCCAGGAAAGACTTACCAGA ATACTATGAATTAATTAGGAAGCCAGTGGATTTCAAAAAGATAAAG
	INTRON 4 - 5	26,771,044	26,771,507			464	GTAGATACTCTGTTCCCTGTTGTTC..........TGTTTTCACCCGAAATTCCCCTCAG
5	EXON 5	26,771,508	26,771,609	0	0	102	GAGCGAATCCGTAATCATAAGTATCGGAGCCTGGGAGACCTGGAGAAAGACGTCATGCTT CTCTGTCACAACGCACAGACATTCAACTTGGAAGGATCCCAG
	INTRON 5 - 6	26,771,610	26,774,172			2,563	GTACGTGTCAAGTTGTCGGAGACGT..........AACAGCTGACACTTTGGCCATTTAG
6	EXON 6	26,774,173	26,774,305	0	-	133	ATCTACGAAGACTCCATTGTCCTACAGTCAGTGTTTAAGAGTGCTCGGCAGAAAATTGCC AAAGAAGAAGAGAGTGAGGAAGAAAGCAATGAAGAAGAGGAAGAAGATGATGAAGAGGAG TCAGAGTCAGAGG
	3' upstream sequence						GTAAGTCCCATGCACCTGGCCCTTCCCACTCGAGGGGCTGTTTCCACAGACACTAAAGAC TATATACTTGCCCCGCTTGCTTGTGTCCAGTTTTCTCTGCTGTTAAAATGAAGCACACCA GCCATGGAGCTCAGGACTGCCCATGTGGCCTTTGGATGTTAGGATAACACTCGTGTACAC AGCACCTGTCACTCCGGGCAAAGCATTATAGCATGGCTTGAGGAACATAGACTGTGAGGC TCCATCCCAGTGTTTCTGGGTCAGAGAGGTCCTGCCCTCTACGTGTTCCCACAGGGCACT GCTGGACCCAGGCCTTACTTAGACAGGCATCGATTTTCAAACTGATCTTAGTGCGCCTAT TAATTTTGGTCTGCATAGAGACCTGACTTCACAAACATCATCTGGTTTATTGCTAATTAG TGTAGGTGAATTGGAAGGTGAAAGGTATAGTCCCATAATCTATACGATGTGAAGATGTGT GTTCCAGTTCTCTGATATTTTGTAGCATACATTTCTACACTTAACAGATCCCAAAACATT AACGAATGCTTCAAACTGTCTTAATTTCACTGTTCCAATCAGGCCGTTTCCTTACATTTC CCCAAAGAGATTGGAAGCCTCAGCTCACGTATTCTTTCTGCAGTGATCAAATCCCCCACC CCCACTGAAATAGATCCAGCCGGTCCTGAGATCTACAAACATTGCGGGGATTGGCTTATG TGGTAGACCCACCTTTTCGTGACTTATCCTCAAGTATGTGGAGTCATAGCCGTGGGCTGC CTATTCCAGAAGTTCCTGAGGTGGCATAGCACGTCACACTCTTCTGAGCAGGAGCAGAAA TGGCTGCAGTCTTCCTGACAATGCAATTGACAGTGTTAGAATGTCCTGTGTGGCTGCTAC CACTGTACCCCCACCAAAGTCTGCCAACATGGCTTCACAGTGGCTCTCTCTGTTGTAGCG CCCATCACTGGGGAACTGGTTAAATTGATTATAGAGTAGA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000175842

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 235 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information