MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Smarca2 (ENSMUSG00000024921)

Cross Reference

EMBL	AC118249, AC118472
GO	GO:0000790, GO:0001105, GO:0005515, ...show all
goslim_goa	GO:0000228, GO:0000988, GO:0003674, ...show all
MGI_trans_name	Smarca2-006
OTTP	OTTMUSP00000058201
OTTT	OTTMUST00000104067
UCSC	uc008hbr.1
UniParc	UPI00024675F1
Uniprot/SPTREMBL	H3BKN5
Vega_transcript	OTTMUST00000104067, Smarca2-006

Vega_translation

222489, OTTMUSP00000058201

Definition

protein_id:ENSMUSP00000135460
translation:

GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRSESVIISIGAWETWRKTSCFSVTTHRHS
TWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL

Chromosome

Length
Position(start - end)

24,164
26,751,947 - 26,776,112

Orient to Chromosome

plus

Link

Location : (19:26751947-26776112)
/

Detail Map

name	Smarca2 (ENSMUSG00000024921)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Smarca2 note : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]

name	4931403E22Rik (ENSMUSG00000093772)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : 4931403E22Rik note : RIKEN cDNA 4931403E22 gene [Source:MGI Symbol;Acc:MGI:1918192]

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000025862

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176030

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000099537

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176769

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175791

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176698

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177252

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176475

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000112637

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175842

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175953

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176731

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177116

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177484

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS29720.1 RefSeq_peptide:NP_035546 RefSeq_mRNA:NM_011416.2 RefSeq_mRNA_predicted:XM_006527285 RefSeq_peptide_predicted:XP_006527348.1 Vega_transcript:OTTMUST00000104062 Vega_transcript:Smarca2-001 Uniprot/SPTREMBL:F2Z4A9 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0000790 GO:GO:0001105 GO:GO:0001105 GO:GO:0003682 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0007286 GO:GO:0008152 GO:GO:0008285 GO:GO:0008285 GO:GO:0016514 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0043231 GO:GO:0044212 GO:GO:0044212 GO:GO:0045111 GO:GO:0045111 GO:GO:0045892 GO:GO:0045892 GO:GO:0045893 GO:GO:0045893 GO:GO:0045944 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-001 Vega_translation:222477 Vega_translation:OTTMUSP00000058197 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058197 OTTT:OTTMUST00000104062 UniParc:UPI000042B0CA
definition	note : transcript_id=ENSMUST00000025862 protein_id : ENSMUSP00000025862 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_mRNA_predicted:XM_006527281.2 RefSeq_mRNA_predicted:XM_006527282.2 RefSeq_mRNA_predicted:XM_006527283.2 RefSeq_mRNA_predicted:XM_006527284.2 RefSeq_mRNA_predicted:XM_006527286.1 RefSeq_peptide_predicted:XP_006527344.1 RefSeq_peptide_predicted:XP_006527345.1 RefSeq_peptide_predicted:XP_006527346.1 RefSeq_peptide_predicted:XP_006527347.1 RefSeq_peptide_predicted:XP_006527349.1 Vega_transcript:OTTMUST00000104061 Vega_transcript:Smarca2-003 Uniprot/SPTREMBL:H3BLH0 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-003 Vega_translation:222478 Vega_translation:OTTMUSP00000058196 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058196 OTTT:OTTMUST00000104061 UniParc:UPI00024675E9
definition	note : transcript_id=ENSMUST00000176030 protein_id : ENSMUSP00000135784 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104063 Vega_transcript:Smarca2-002 Uniprot/SPTREMBL:E9QAB8 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-002 Vega_translation:222479 Vega_translation:OTTMUSP00000058198 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058198 OTTT:OTTMUST00000104063 UniParc:UPI0000D8ACEB
definition	note : transcript_id=ENSMUST00000099537 protein_id : ENSMUSP00000097135 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNRSESVIISIGAWETWRKTSCFSVTTHRHSTWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104064 Vega_transcript:Smarca2-005 Uniprot/SPTREMBL:H3BJK2 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-005 Vega_translation:222480 Vega_translation:OTTMUSP00000058199 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058199 OTTT:OTTMUST00000104064 UniParc:UPI00024675EB
definition	note : transcript_id=ENSMUST00000176769 protein_id : ENSMUSP00000135017 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104079 Vega_transcript:Smarca2-010 Uniprot/SPTREMBL:H3BKJ3 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-010 Vega_translation:222482 Vega_translation:OTTMUSP00000058207 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058207 OTTT:OTTMUST00000104079 UniParc:UPI00024675ED
definition	note : transcript_id=ENSMUST00000175791 protein_id : ENSMUSP00000135412 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104073 Vega_transcript:Smarca2-011 Uniprot/SPTREMBL:H3BKJ3 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-011 Vega_translation:222483 Vega_translation:OTTMUSP00000058204 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058204 OTTT:OTTMUST00000104073 UniParc:UPI00024675ED
definition	note : transcript_id=ENSMUST00000176698 protein_id : ENSMUSP00000134914 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104080 Vega_transcript:Smarca2-016 Uniprot/SPTREMBL:H3BJI1 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-016 Vega_translation:222484 Vega_translation:OTTMUSP00000058208 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058208 OTTT:OTTMUST00000104080 UniParc:UPI00024675EE
definition	note : transcript_id=ENSMUST00000177252 protein_id : ENSMUSP00000134995 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006527351.1 RefSeq_peptide_predicted:XP_006527352.1 Vega_transcript:OTTMUST00000104074 Vega_transcript:Smarca2-009 Uniprot/SPTREMBL:H3BK47 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-009 Vega_translation:222485 Vega_translation:OTTMUSP00000058205 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058205 OTTT:OTTMUST00000104074 UniParc:UPI00001ECDC7
definition	note : transcript_id=ENSMUST00000176475 protein_id : ENSMUSP00000135248 translation : MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS37945.1 RefSeq_peptide:NP_080279 RefSeq_mRNA:NM_026003.2 RefSeq_mRNA_predicted:XM_006527290 RefSeq_mRNA_predicted:XM_006527291 RefSeq_peptide_predicted:XP_006527354.1 Vega_transcript:OTTMUST00000104066 Vega_transcript:Smarca2-007 Uniprot/SPTREMBL:Q9D007 UCSC:uc008hbr.1 Fantom:2610209L14 EMBL:AC118249 EMBL:AC118472 EMBL:AK011935 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-007 Vega_translation:222486 Vega_translation:OTTMUSP00000058200 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:BAB27925.1 OTTP:OTTMUSP00000058200 OTTT:OTTMUST00000104066 UniParc:UPI00000224A2
definition	note : transcript_id=ENSMUST00000112637 protein_id : ENSMUSP00000108256 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104081 Vega_transcript:Smarca2-015 Uniprot/SPTREMBL:H3BLI4 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-015 Vega_translation:222487 Vega_translation:OTTMUSP00000058209 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058209 OTTT:OTTMUST00000104081 UniParc:UPI00024675EF
definition	note : transcript_id=ENSMUST00000175842 protein_id : ENSMUSP00000135800 translation : MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104082 Vega_transcript:Smarca2-017 Uniprot/SPTREMBL:H3BJM2 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-017 Vega_translation:222488 Vega_translation:OTTMUSP00000058210 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058210 OTTT:OTTMUST00000104082 UniParc:UPI00024675F0
definition	note : transcript_id=ENSMUST00000175953 protein_id : ENSMUSP00000135042 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLP

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104067 Vega_transcript:Smarca2-006 Uniprot/SPTREMBL:H3BKN5 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-006 Vega_translation:222489 Vega_translation:OTTMUSP00000058201 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058201 OTTT:OTTMUST00000104067 UniParc:UPI00024675F1
definition	note : transcript_id=ENSMUST00000176731 protein_id : ENSMUSP00000135460 translation : GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRSESVIISIGAWETWRKTSCFSVTTHRHSTWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104083 Vega_transcript:Smarca2-018 Uniprot/SPTREMBL:Q99KH6 UCSC:uc012bjx.1 EMBL:AC118249 EMBL:AC118472 EMBL:BC004653 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-018 Vega_translation:222490 Vega_translation:OTTMUSP00000058211 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:AAH04653.1 OTTP:OTTMUSP00000058211 OTTT:OTTMUST00000104083 UniParc:UPI00000E78BF
definition	note : transcript_id=ENSMUST00000177116 protein_id : ENSMUSP00000135116 translation : MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104077 Vega_transcript:Smarca2-014 Uniprot/SPTREMBL:Q99KH6 UCSC:uc012bjx.1 EMBL:AC118249 EMBL:AC118472 EMBL:BC004653 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-014 Vega_translation:222491 Vega_translation:OTTMUSP00000058212 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:AAH04653.1 OTTP:OTTMUSP00000058212 OTTT:OTTMUST00000104077 UniParc:UPI00000E78BF
definition	note : transcript_id=ENSMUST00000177484 protein_id : ENSMUSP00000135869 translation : MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name
type	misc_feature
link
xref
definition	note : contig AC118472.8 1..207146(-1)

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104065 Vega_transcript:OTTMUST00000104065 MGI_trans_name:Smarca2-004 OTTT:OTTMUST00000104065
definition	note : processed_transcript note : transcript_id=ENSMUST00000175935

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104078 Vega_transcript:OTTMUST00000104078 MGI_trans_name:Smarca2-019 OTTT:OTTMUST00000104078
definition	note : retained_intron note : transcript_id=ENSMUST00000176700

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104069 Vega_transcript:OTTMUST00000104069 MGI_trans_name:Smarca2-008 OTTT:OTTMUST00000104069
definition	note : processed_transcript note : transcript_id=ENSMUST00000176494

name	4931403E22Rik (ENSMUSG00000093772)
type	misc_RNA
link	VEGA Ensembl MGI
xref	RefSeq_ncRNA:NR_045306 Vega_transcript:OTTMUST00000104068 Vega_transcript:OTTMUST00000104068 UCSC:uc029trw.1 Clone_based_vega_transcript:RP23-187N14.2-001 MGI_trans_name:4931403E22Rik-001 OTTT:OTTMUST00000104068
definition	note : processed_transcript note : transcript_id=ENSMUST00000177048

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000176731

Reports
substitution
cSNPs	1
Insertion	26
Deletion	39
SNPs	-1kb 26746951(c.-4996T>C), 26746952(c.-4995A>G), 26747032(c.-4915T>A), 26747033(c.-4914A>C), 26747035(c.-4912G>A), 26747336(c.-4611C>T), 26747342(c.-4605C>A), 26747345(c.-4602C>A), 26747536(c.-4411G>A), 26747579(c.-4368C>G), 26747706(c.-4241T>A), 26747884(c.-4063A>G), 26747952(c.-3995A>G), 26748753(c.-3194A>G), 26749207(c.-2740G>A), 26749287(c.-2660T>C), 26750333(c.-1614T>A), 26750509(c.-1438A>T), 26751072(c.-875T>C), 26751336(c.-611A>C), 26751402(c.-545T>G), 26751404(c.-543T>C), 26751423(c.-524T>C), 26751439(c.-508C>T), 26751489(c.-458C>T), 26751703(c.-244A>G), 26751800(c.-147T>C), 26751817(c.-130T>C), 5'UTR CDS 26774295(c.320G>A), 3'UTR 26776201(c.89C>T), 26776231(c.119A>G), 26777559(c.356T>C), 26777753(c.550T>C), 26778119(c.916A>G), 26778242(c.1039A>C), 26778313(c.1110G>T), INTRON 26752574(c.95+533A>G), 26752984(c.95+943A>C), 26753148(c.95+1107T>C), 26753321(c.95+1280A>G), 26753325(c.95+1284A>G), 26753413(c.95+1372T>G), 26753661(c.95+1620T>G), 26753870(c.95+1829C>T), 26753896(c.95+1855C>T), 26753966(c.95+1925T>A), 26753968(c.95+1927T>A), 26753970(c.95+1929A>T), 26753972(c.95+1931A>T), 26754083(c.95+2042C>G), 26755138(c.95+3097A>G), 26755139(c.95+3098T>C), 26755190(c.95+3149G>C), 26755245(c.95+3204C>T), 26755399(c.95+3358A>T), 26755413(c.95+3372G>A), 26755425(c.95+3384A>G), 26755517(c.95+3476C>T), 26755625(c.95+3584T>C), 26755688(c.95+3647T>C), 26755693(c.95+3652G>C), 26755699(c.95+3658T>C), 26755870(c.95+3829C>T), 26755892(c.95+3851C>T), 26756092(c.95+4051G>A), 26756117(c.95+4076C>T), 26756208(c.95+4167T>C), 26756241(c.95+4200T>C), 26756286(c.95+4245A>G), 26756482(c.95+4441G>A), 26756485(c.95+4444G>A), 26756554(c.95+4513C>T), 26756623(c.95+4582C>A), 26756679(c.95+4638T>C), 26756876(c.95+4835T>G), 26756882(c.95+4841A>C), 26756884(c.95+4843T>C), 26756964(c.95+4923T>C), 26756966(c.95+4925T>A), 26757008(c.95+4967T>C), 26757032(c.95+4991A>G), 26757170(c.95+5129T>C), 26757339(c.95+5298C>T), 26757467(c.95+5426A>G), 26757510(c.95+5469T>A), 26757562(c.95+5521C>G), 26757577(c.95+5536A>G), 26757578(c.95+5537C>T), 26757604(c.95+5563C>T), 26757659(c.95+5618C>T), 26757912(c.95+5871G>A), 26758328(c.95+6287C>T), 26758482(c.95+6441G>A), 26758514(c.95+6473G>A), 26758571(c.95+6530G>A), 26758576(c.95+6535G>A), 26758583(c.95+6542C>T), 26758602(c.95+6561A>G), 26758631(c.95+6590G>C), 26758818(c.95+6777C>A), 26758822(c.95+6781T>G), 26758858(c.95+6817A>G), 26758888(c.95+6847C>T), 26758915(c.95+6874T>A), 26759061(c.95+7020T>C), 26759086(c.95+7045T>C), 26759215(c.95+7174T>G), 26759218(c.95+7177T>G), 26759418(c.95+7377G>A), 26759456(c.95+7415C>T), 26759465(c.95+7424G>T), 26759548(c.95+7507C>T), 26759578(c.95+7537G>A), 26759581(c.95+7540C>T), 26759588(c.95+7547A>T), 26759623(c.95+7582C>T), 26759645(c.95+7604G>A), 26759669(c.95+7628A>G), 26759719(c.95+7678A>G), 26759737(c.95+7696G>A), 26759747(c.95+7706T>G), 26759754(c.95+7713A>T), 26759756(c.95+7715G>A), 26759763(c.95+7722A>C), 26760199(c.95+8158T>C), 26760249(c.95+8208C>A), 26760627(c.95+8586C>G), 26760684(c.95+8643C>T), 26760732(c.95+8691A>T), 26760794(c.95+8753C>A), 26760795(c.95+8754C>A), 26760857(c.95+8816A>G), 26761080(c.95+9039C>T), 26761173(c.95+9132C>T), 26761216(c.95+9175C>T), 26761276(c.95+9235A>G), 26761602(c.95+9561T>C), 26761634(c.95+9593G>A), 26761791(c.96-9717A>G), 26761915(c.96-9593C>G), 26762059(c.96-9449A>G), 26762139(c.96-9369C>A), 26762166(c.96-9342T>G), 26762236(c.96-9272C>T), 26762269(c.96-9239C>T), 26762281(c.96-9227T>C), 26762298(c.96-9210T>G), 26762331(c.96-9177A>C), 26762342(c.96-9166T>A), 26762648(c.96-8860G>T), 26762897(c.96-8611A>G), 26763434(c.96-8074T>C), 26763451(c.96-8057G>A), 26763735(c.96-7773G>A), 26763906(c.96-7602A>G), 26764161(c.96-7347C>T), 26764284(c.96-7224A>G), 26764423(c.96-7085A>C), 26764453(c.96-7055T>C), 26764763(c.96-6745T>C), 26764846(c.96-6662A>G), 26764847(c.96-6661A>G), 26764937(c.96-6571A>C), 26764940(c.96-6568A>T), 26765106(c.96-6402G>A), 26765165(c.96-6343T>C), 26765388(c.96-6120C>A), 26765829(c.96-5679G>T), 26765868(c.96-5640C>T), 26765913(c.96-5595C>G), 26766049(c.96-5459T>G), 26766065(c.96-5443A>G), 26766277(c.96-5231C>T), 26766343(c.96-5165C>A), 26766354(c.96-5154T>G), 26766360(c.96-5148T>C), 26766520(c.96-4988C>A), 26766523(c.96-4985A>T), 26766528(c.96-4980T>G), 26766530(c.96-4978T>A), 26766583(c.96-4925C>T), 26766632(c.96-4876C>T), 26766745(c.96-4763A>G), 26766758(c.96-4750T>G), 26766766(c.96-4742A>C), 26766839(c.96-4669G>A), 26766975(c.96-4533G>A), 26767015(c.96-4493T>C), 26767054(c.96-4454A>G), 26767180(c.96-4328C>G), 26767236(c.96-4272A>T), 26767430(c.96-4078C>T), 26767507(c.96-4001T>C), 26767516(c.96-3992G>A), 26767920(c.96-3588A>C), 26768112(c.96-3396A>T), 26768429(c.96-3079G>C), 26768494(c.96-3014A>T), 26768620(c.96-2888C>T), 26768848(c.96-2660C>T), 26769343(c.96-2165C>T), 26769636(c.96-1872C>T), 26770053(c.96-1455A>G), 26770076(c.96-1432G>A), 26770140(c.96-1368A>G), 26770179(c.96-1329T>C), 26770528(c.96-980G>A), 26770572(c.96-936G>T), 26770839(c.96-669G>A), 26771326(c.96-182T>C), 26771369(c.96-139C>T), 26771613(c.197+4T>C), 26771627(c.197+18A>G), 26771673(c.197+64T>A), 26771747(c.197+138T>G), 26771758(c.197+149T>C), 26771786(c.197+177T>G), 26771794(c.197+185A>C), 26771885(c.197+276T>C), 26772229(c.197+620T>C), 26772440(c.197+831T>C), 26773033(c.198-1140A>C), 26773280(c.198-893C>T), 26773321(c.198-852T>G), 26773495(c.198-678C>T), 26773684(c.198-489T>A), 26773706(c.198-467C>T), 26773707(c.198-466T>C), 26773838(c.198-335C>A), 26773839(c.198-334G>A), 26773874(c.198-299G>C), 26773907(c.198-266C>G), 26773942(c.198-231T>A), 26773960(c.198-213G>A), 26774043(c.198-130A>G), 26774315(c.330+10G>A), 26774513(c.330+208G>A), 26774692(c.330+387T>C), 26774837(c.330+532A>C), 26775062(c.330+757C>T), 26775226(c.331-875T>C), 26775369(c.331-732A>G), 26775580(c.331-521T>C), 26775640(c.331-461G>A), 26775666(c.331-435T>C), 26775684(c.331-417C>T), 26775751(c.331-350T>C), 26776002(c.331-99G>A), 26776043(c.331-58G>A), 26776069(c.331-32T>C), 26776328(c.131+85C>G), 26776395(c.131+152T>C), 26776407(c.131+164A>G), 26776585(c.131+342G>A), 26776593(c.131+350T>A), 26776597(c.131+354A>G), 26776604(c.131+361A>G), 26776672(c.131+429C>A), 26776715(c.131+472T>A), 26776720(c.131+477T>A), 26776909(c.132-426C>T), 26777083(c.132-252A>G), 26777189(c.132-146A>G), +1kb 26778346(c.2234C>T), 26778400(c.2288A>G), 26778422(c.2310G>T), 26778432(c.2320C>A), 26778477(c.2365A>T), 26778598(c.2486T>G), 26778691(c.2579T>A), 26778744(c.2632T>C), 26778843(c.2731A>T), 26778902(c.2790T>C), 26778903(c.2791A>G), 26778969(c.2857G>A), 26778999(c.2887G>A), 26779139(c.3027C>T), 26779151(c.3039T>C), 26779212(c.3100T>C), 26779256(c.3144T>A), 26779258(c.3146T>C), 26779341(c.3229T>C), 26779391(c.3279T>C), 26779421(c.3309A>G), 26779426(c.3314C>G), 26779440(c.3328G>A), 26779790(c.3678C>A), 26779794(c.3682T>C), 26779795(c.3683C>G), 26779844(c.3732G>A), 26780101(c.3989C>T), 26780210(c.4098G>A), 26780434(c.4322C>T), 26780799(c.4687G>A), 26780854(c.4742T>C), 26780896(c.4784A>T), 26780897(c.4785A>G), 26780898(c.4786C>G), 26780906(c.4794C>T), 26780907(c.4795C>T), 26780974(c.4862T>C), 26781000(c.4888T>G), 26781019(c.4907G>C), 26781043(c.4931T>A), 26781086(c.4974A>C), 26781087(c.4975G>A), 26781129(c.5017T>C), 26781202(c.5090C>T), 26781236(c.5124A>C), 26781256(c.5144G>A), 26781302(c.5190T>G), 26781349(c.5237A>G), 26781351(c.5239C>T), 26781371(c.5259C>T), 26781392(c.5280C>A), 26781464(c.5352A>G), 26781481(c.5369A>G), 26781482(c.5370A>C), 26781510(c.5398A>G), 26781800(c.5688G>A), 26782385(c.6273C>T), 26782391(c.6279C>T), 26782401(c.6289T>C), 26782428(c.6316T>C), 26782867(c.6755G>A), 26783050(c.*6938T>C),
Insertions	-1kb 26749235 (c.-2713_-2712dupAA), 26750483 (c.-1464dupT), 5'UTR CDS 3'UTR 26777596 (c.393_394insT), 26778064 (c.870dupT), 26778071 (c.868_869insCT), INTRON 26755014 (c.95+2983dupA), 26759224 (c.95+7183_95+7184insTCTT), 26761856 (c.96-9652dupG), 26762434 (c.96-9074_96-9073insT), 26764462 (c.96-7045_96-7044insGGGGG), 26764646 (c.96-6862dupA), 26764708 (c.96-6794_96-6792dupAAA), 26764717 (c.96-6791_96-6790insAA), 26766223 (c.96-5277dupT), 26766526 (c.96-4981dupC), 26768706 (c.96-2800_96-2798dupCAT), 26773767 (c.198-406_198-405insA), 26774006 (c.198-166_198-165dupAG), 26775522 (c.331-570_331-569dupTT), 26776063 (c.331-35_331-34insTTGA), 26776491 (c.131+250dupA), +1kb 26779265 (c.3153_3154insC), 26779454 (c.3342_3343insTTTTT), 26781151 (c.5039_5040insCAC), 26782143 (c.6031_6032insTT), 26782910 (c.6798_6799insG),
Deletions	-1kb 26747244 (c.-4702_-4701delAC), 26748383 (c.-3563delC), 26748605 (c.-3341_-3338delTTGT), 26748645 (c.-3301_-3299delCTT), 26748659 (c.-3287_-3285delCCC), 26748668 (c.-3278_-3272delCCCCAGC), 26749148 (c.-2798delT), 26749382 (c.-2564_-2560delGGGTG), 26749475 (c.-2471delA), 26750265 (c.-1681delC), 26750551 (c.-1395_-1394delAC), 26750833 (c.-1113_-1112delGA), 26750933 (c.-1013_-1012delCT), 26751189 (c.-757_-754delGTGT), 26751371 (c.-575_-574delGT), 5'UTR CDS 3'UTR 26778015 (c.813_814delAA), INTRON 26753499 (c.95+1469delT), 26756391 (c.95+4353_95+4358delGTTCGT), 26759003 (c.95+6963_95+6965delCAG), 26760073 (c.95+8039delG), 26761933 (c.96-9574_96-9565delGGGTGGGGGT), 26764331 (c.96-7176_96-7175delCC), 26765522 (c.96-5985delG), 26766106 (c.96-5401_96-5399delGGC), 26766490 (c.96-5017_96-5013delACCCC), 26767531 (c.96-3975delA), 26769909 (c.96-1598delC), 26769920 (c.96-1587_96-1586delTG), 26770249 (c.96-1258delA), 26771299 (c.96-208_96-207delTC), 26772020 (c.197+415_197+418delAGTA), 26772452 (c.197+861_197+862delTT), 26773525 (c.198-647_198-644delAAAA), 26773550 (c.198-622delA), 26773569 (c.198-603_198-600delTTTG), 26773842 (c.198-330delT), +1kb 26778703 (c.2592_2594delTAG), 26778860 (c.2749delC), 26781618 (c.5507delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	1
synonymous substitutions
non-synonymous substitutions	26774295 (p.Arg107Gln),
B6 transcript (ENSMUST00000176731)	GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRSESVIISIGAWETWRKTSCFSVTTHRHS TWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL*
MSMv4 transcript	GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRSESVIISIGAWETWRKTSCFSVTTHRHS TWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSQSQRRNL*
homology	99.12 (114 / 114)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000176731


..........TTTTTTTTCCTTTTTTGTTCCTCTCTTAATTTTTCTTATAAGTTCAGAGA
CTTACCAGGATAAAAGAAAAGTTTGAACTTGTGGGTCCTGTCACATGGATCTTTGAGCCT
TTTCTGAACAGGTCTCCTTCATACCTGTCTGTTTTTATAGCGCTTTTATTATCTTTCTGC
ATTAGTGCGGCTGGCTCTGGTTTAAAGCAAGCGTTTGCAGGTAATTGGAAAAAAAGTGTT
TTGCTGTTTGTGAGTGTGTGTGTGTGTGTGTGTTCTCTATCGGGTGATTTCATTCCGTCT
ACCAGGGAATGTGGCTCCTACTCCCTTCTGCTCCCTTGTTTACTAATTTCTGTGTTAGAA
CAAAAATCTGGATGGAATTGTTGACTTATGTTGTGAATCCTGAGTAAACTGATGTAAAAC
CGTAAAGGTCAGAGCGTGTGTGACTGCATTGATGTCTTAGGGGGTGACTCCATATTCTTC
ACGCGCCCCTGGCTTTTTTGTTTATCATTACCGTCCTTACAGTAATGACATCTTTAGAGT
ATTTTGCTTATATTAAGATACATTTTATGTGCATTCAGTCATTTTCAAGCACTTGAATGT
ATCGATGCTTTAATGTCCGTCACCTGTTTATTATCAGTGCTTTCGGCCTTACAGAATAGA
CTGAGGTTAAAGGTGAATTTCATCCAATATGGTGGTGCCTTTTTCTTTCTCCTTCGTTGA
TGACTGTTAGCTTTTAGTTTTACTTTGCTAGTTCCATTTTATTTTGGTTATTCTAATTAT
TCAAGCTATATGTAGCTATACCCCTTATTGTAAAGGTCTGGATATGTTTGCCTTGGTTAT
TTTCCTTACTTGGATTTTTTCTTCCCTCCTTTCTTTCCTGCTTACAGGCCATCGAAGACG
GCAATTTGGAAGAAATGGAAGAGGAGGTACGGCTTAAGAAGAGAAAAAGACGAAGAAATG
TGGATAAAGACCCCGTGAAGGAAGATGTGGAAAAAGCGAAGAAAAGAAGA
GGCCGCCCTCCGGCTGAGAAGTTGTCACCAAATCCCCCAAAACTAACGAAGCAGATGAACGCCATCATTGATACTGTGATAAACTACAAAGACAG
GTGAGCCCCTGGCTCCTTCCTCTCC..........TGTTTTCACCCGAAATTCCCCTCAG
GAGCGAATCCGTAATCATAAGTATCGGAGCCTGGGAGACCTGGAGAAAGACGTCATGCTTCTCTGTCACAACGCACAGACATTCAACTTGGAAGGATCCCAG
GTACGTGTCAAGTTGTCGGAGACGT..........AACAGCTGACACTTTGGCCATTTAG
ATCTACGAAGACTCCATTGTCCTACAGTCAGTGTTTAAGAGTGCTCGGCAGAAAATTGCCAAAGAAGAAGAGAGTGAGGAAGAAAGCAATGAAGAAGAGGAAGAAGATGATGAAGAGGAGTCAGAGTCAGAGG
GTAAGTCCCATGCACCTGGCCCTTC..........GGGGTCTCTCTTGTGACTGCTCTAG
CGAAATCTGTGAAGGTGAAAATCAAGCTGAATAAAAAGGAAGAGAAAGGCCGGGACACAGGGAAGGGCAAGAAGCGGCCAAACCGAGGCAAAGCCAAACCTGTCGTGAGCGATTTTGACAGTGACGAGGAGCAGGAAGAGAAC
GTGAGTGTACAGGCCGGGGCAGAGG..........CAGTCTGTCTACCTCTTTCTTTTAG
GAACAGTCAGAAGCAAGTGGAACTGATAACGAGTGACCATCCTGGACGTGAGCTTCCCGCGGTGGCAGAACCGAATGCTTTCTTCCCCCTCTCCTTCCTCCCCAGTGAGTTCACTTGCCATTCGGGCACACTGGGTTATTTCTCCGTCCTCATTGTCATCTAGAACTAGCTTTAGGGTAGTGCCAGACAAACATATGATATCATGGTGTAAAAAAAGAAACACACGCGTGCAGACACACTACACACACACACACACACACACACACACACACACACACATATTTGTAACATATTGTGACCAAATGGGCCTCAAAGATTCAAAGATTAAAAACAAAAAGCTTTTGATGGAAAAGATGTGGGTGGATAGTATATTTCTACAGGTGGGTCAGGTTTGGTAGCAGTTTGATGTGCTGGGTTCCGTCATCTGTTCTGATGAGAAGATTTTTATCTTCTGCAGTGCTGATGGCCGGGAGGAACCATTCAAAGCCACTGGTTATTTTGTTTTTCATCAGGCGATTTTCAAGATTTTCATTTGTTTCAGTATTGTTGGTTTTCTCTTTTCTCTTTTTTACACTGTGGTACATATAAGCAACTTGACTAGTGACAAATGTACAGTAGTTAGATATCACCTACATATACATTTTTCCATTTTATGCTCTATGATCTGAAGAACAAAAAAAAAAGCTTTTTGACTTGTATAAGATTTATGTCTACTGTAAACATTGCGGAATTTTTTTTTGTTCTTGTTTTATTGACAATGCTATTGAGTATTACAGTGTCTAGAGTACCCTGGATGGCTTCTCTTGTCCACCCGATCTCCCGTGTTACCAATGTGTATGGTCTCCTTCTCCCGAAAGTGTACTTAATCTTTGCTTTCTTTGCACAATGTCTTTGGTTGCAAGTCATACGCCTGAGGCAAATAAAATTCCAGTAATTTCCAAGAATGTGGTGTTGGTACTTTCCTAATAAACCGATAACTTACCTTGA
CTCTGTCGCCTTTTCTTTTATGAGTGCTAGGGCACTAAACCTCTGGGTGTGAGCAAGAGC
TATCTGCAGATAGAGAAGGGCCTTGTCATACAGATCATATTGGGGAGGGGAGAGATCATT
GCTTTTCTGGCTAAAAGAGAGGCTGCTGCCAGTCATCCTTTGCCTCCTGGCTTTAAATTT
CATTCATTAGTCAGAAAAATCTATAAAGGTAGGTAATGTGGAGACTGGCTCAGTCACTAC
CCATATGCCCTTCCCACTAAGATTTAACAAAATTTTGTGCAGTGTGCCTTGTTTTAATAA
GCCATGAGGATATAAGTCACAAGAGCAGGCACCCACAGTCCCACTGTCAAGCAGAAGGGA
TTAACACCCATCCTCTAATAGTTAGTAGACCAGTCGCTAGCATATCTGCCAGTTGCCCTA
AACTTGTGTTTGGGTTTTCAATCATATGTCTTGATGTCTTTTTAAAGTCCTTAAAAAGCC
AGCCCCGAGACTGGTGCATCCTTCCCAAGGAACTGCCAGCATAGTCAAATGGAAGTTTTC
CACGCCACTAAGGAGGGTTAACATTTTCCTAAGGAGCAGGCGAGATTGCGCTAGGTGAGC
TTTCCAGTGCCATATCAGACCACAGTCCTACGAAGCTTCATCTTCCCATCATGTCTGCTC
TGACTTCCCAGCTACTCAGAGCATTCCGGAATATTATATTTCTTTTTTGGGGGTTTGCTT
ATGGGATTTACTTACTGCGGTAGGAATGGAGACTTCAGAGAGAAGCCATATTAACTTTCC
ACTCTGAGACCACTTAATATCAGTTCAAAGAAAACAGTGCCTCCCCCCTCTGCTTTCATT
TCTGTATTTTCTGTGCTGTTCTTGGCTTTGGAGGCCCTGCAGTTGGAAGGCGAGCCAAAC
CATTGTTTTTCTGGTCCAAGCCTTCTCTGCCTGGTGTGTGTGCTCCCTCTTCCTCCTGCT
GCATTTGCTGAACTGTTCTCCCTGCCCGGTACAGGACGTA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TTTTTTTTCCTTTTTTGTTCCTCTCTTAATTTTTCTTATAAGTTCAGAGA CTTACCAGGATAAAAGAAAAGTTTGAACTTGTGGGTCCTGTCACATGGATCTTTGAGCCT TTTCTGAACAGGTCTCCTTCATACCTGTCTGTTTTTATAGCGCTTTTATTATCTTTCTGC ATTAGTGCGGCTGGCTCTGGTTTAAAGCAAGCGTTTGCAGGTAATTGGAAAAAAAGTGTT TTGCTGTTTGTGAGTGTGTGTGTGTGTGTGTGTTCTCTATCGGGTGATTTCATTCCGTCT ACCAGGGAATGTGGCTCCTACTCCCTTCTGCTCCCTTGTTTACTAATTTCTGTGTTAGAA CAAAAATCTGGATGGAATTGTTGACTTATGTTGTGAATCCTGAGTAAACTGATGTAAAAC CGTAAAGGTCAGAGCGTGTGTGACTGCATTGATGTCTTAGGGGGTGACTCCATATTCTTC ACGCGCCCCTGGCTTTTTTGTTTATCATTACCGTCCTTACAGTAATGACATCTTTAGAGT ATTTTGCTTATATTAAGATACATTTTATGTGCATTCAGTCATTTTCAAGCACTTGAATGT ATCGATGCTTTAATGTCCGTCACCTGTTTATTATCAGTGCTTTCGGCCTTACAGAATAGA CTGAGGTTAAAGGTGAATTTCATCCAATATGGTGGTGCCTTTTTCTTTCTCCTTCGTTGA TGACTGTTAGCTTTTAGTTTTACTTTGCTAGTTCCATTTTATTTTGGTTATTCTAATTAT TCAAGCTATATGTAGCTATACCCCTTATTGTAAAGGTCTGGATATGTTTGCCTTGGTTAT TTTCCTTACTTGGATTTTTTCTTCCCTCCTTTCTTTCCTGCTTACAGGCCATCGAAGACG GCAATTTGGAAGAAATGGAAGAGGAGGTACGGCTTAAGAAGAGAAAAAGACGAAGAAATG TGGATAAAGACCCCGTGAAGGAAGATGTGGAAAAAGCGAAGAAAAGAAGA
1	EXON 1	26,751,947	26,752,041	-	2	95	GGCCGCCCTCCGGCTGAGAAGTTGTCACCAAATCCCCCAAAACTAACGAAGCAGATGAAC GCCATCATTGATACTGTGATAAACTACAAAGACAG
	INTRON 1 - 2	26,752,042	26,771,507			19,466	GTGAGCCCCTGGCTCCTTCCTCTCC..........TGTTTTCACCCGAAATTCCCCTCAG
2	EXON 2	26,771,508	26,771,609	2	2	102	GAGCGAATCCGTAATCATAAGTATCGGAGCCTGGGAGACCTGGAGAAAGACGTCATGCTT CTCTGTCACAACGCACAGACATTCAACTTGGAAGGATCCCAG
	INTRON 2 - 3	26,771,610	26,774,172			2,563	GTACGTGTCAAGTTGTCGGAGACGT..........AACAGCTGACACTTTGGCCATTTAG
3	EXON 3	26,774,173	26,774,305	2	0	133	ATCTACGAAGACTCCATTGTCCTACAGTCAGTGTTTAAGAGTGCTCGGCAGAAAATTGCC AAAGAAGAAGAGAGTGAGGAAGAAAGCAATGAAGAAGAGGAAGAAGATGATGAAGAGGAG TCAGAGTCAGAGG
	INTRON 3 - 4	26,774,306	26,776,100			1,795	GTAAGTCCCATGCACCTGGCCCTTC..........GGGGTCTCTCTTGTGACTGCTCTAG
4	EXON 4	26,776,101	26,776,243	0	-	143	CGAAATCTGTGAAGGTGAAAATCAAGCTGAATAAAAAGGAAGAGAAAGGCCGGGACACAG GGAAGGGCAAGAAGCGGCCAAACCGAGGCAAAGCCAAACCTGTCGTGAGCGATTTTGACA GTGACGAGGAGCAGGAAGAGAAC
	INTRON 4 - 5	26,776,244	26,777,334			1,091	GTGAGTGTACAGGCCGGGGCAGAGG..........CAGTCTGTCTACCTCTTTCTTTTAG
5	EXON 5	26,777,335	26,778,321	-	-	987	GAACAGTCAGAAGCAAGTGGAACTGATAACGAGTGACCATCCTGGACGTGAGCTTCCCGC GGTGGCAGAACCGAATGCTTTCTTCCCCCTCTCCTTCCTCCCCAGTGAGTTCACTTGCCA TTCGGGCACACTGGGTTATTTCTCCGTCCTCATTGTCATCTAGAACTAGCTTTAGGGTAG TGCCAGACAAACATATGATATCATGGTGTAAAAAAAGAAACACACGCGTGCAGACACACT ACACACACACACACACACACACACACACACACACACACATATTTGTAACATATTGTGACC AAATGGGCCTCAAAGATTCAAAGATTAAAAACAAAAAGCTTTTGATGGAAAAGATGTGGG TGGATAGTATATTTCTACAGGTGGGTCAGGTTTGGTAGCAGTTTGATGTGCTGGGTTCCG TCATCTGTTCTGATGAGAAGATTTTTATCTTCTGCAGTGCTGATGGCCGGGAGGAACCAT TCAAAGCCACTGGTTATTTTGTTTTTCATCAGGCGATTTTCAAGATTTTCATTTGTTTCA GTATTGTTGGTTTTCTCTTTTCTCTTTTTTACACTGTGGTACATATAAGCAACTTGACTA GTGACAAATGTACAGTAGTTAGATATCACCTACATATACATTTTTCCATTTTATGCTCTA TGATCTGAAGAACAAAAAAAAAAGCTTTTTGACTTGTATAAGATTTATGTCTACTGTAAA CATTGCGGAATTTTTTTTTGTTCTTGTTTTATTGACAATGCTATTGAGTATTACAGTGTC TAGAGTACCCTGGATGGCTTCTCTTGTCCACCCGATCTCCCGTGTTACCAATGTGTATGG TCTCCTTCTCCCGAAAGTGTACTTAATCTTTGCTTTCTTTGCACAATGTCTTTGGTTGCA AGTCATACGCCTGAGGCAAATAAAATTCCAGTAATTTCCAAGAATGTGGTGTTGGTACTT TCCTAATAAACCGATAACTTACCTTGA
	3' upstream sequence						CTCTGTCGCCTTTTCTTTTATGAGTGCTAGGGCACTAAACCTCTGGGTGTGAGCAAGAGC TATCTGCAGATAGAGAAGGGCCTTGTCATACAGATCATATTGGGGAGGGGAGAGATCATT GCTTTTCTGGCTAAAAGAGAGGCTGCTGCCAGTCATCCTTTGCCTCCTGGCTTTAAATTT CATTCATTAGTCAGAAAAATCTATAAAGGTAGGTAATGTGGAGACTGGCTCAGTCACTAC CCATATGCCCTTCCCACTAAGATTTAACAAAATTTTGTGCAGTGTGCCTTGTTTTAATAA GCCATGAGGATATAAGTCACAAGAGCAGGCACCCACAGTCCCACTGTCAAGCAGAAGGGA TTAACACCCATCCTCTAATAGTTAGTAGACCAGTCGCTAGCATATCTGCCAGTTGCCCTA AACTTGTGTTTGGGTTTTCAATCATATGTCTTGATGTCTTTTTAAAGTCCTTAAAAAGCC AGCCCCGAGACTGGTGCATCCTTCCCAAGGAACTGCCAGCATAGTCAAATGGAAGTTTTC CACGCCACTAAGGAGGGTTAACATTTTCCTAAGGAGCAGGCGAGATTGCGCTAGGTGAGC TTTCCAGTGCCATATCAGACCACAGTCCTACGAAGCTTCATCTTCCCATCATGTCTGCTC TGACTTCCCAGCTACTCAGAGCATTCCGGAATATTATATTTCTTTTTTGGGGGTTTGCTT ATGGGATTTACTTACTGCGGTAGGAATGGAGACTTCAGAGAGAAGCCATATTAACTTTCC ACTCTGAGACCACTTAATATCAGTTCAAAGAAAACAGTGCCTCCCCCCTCTGCTTTCATT TCTGTATTTTCTGTGCTGTTCTTGGCTTTGGAGGCCCTGCAGTTGGAAGGCGAGCCAAAC CATTGTTTTTCTGGTCCAAGCCTTCTCTGCCTGGTGTGTGTGCTCCCTCTTCCTCCTGCT GCATTTGCTGAACTGTTCTCCCTGCCCGGTACAGGACGTA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000176731

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 114 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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