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Target CDS Information

Gene Symbol (Gene ID) Fer1l5 (ENSMUSG00000037432)
Cross Reference
EMBL GL456084, KC440916
GO GO:0003674, GO:0005575, GO:0005886, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005623, ...show all
MGI_trans_name Fer1l5-002
OTTP OTTMUSP00000069323
OTTT OTTMUST00000128917
RefSeq_mRNA NM_001277076.1
RefSeq_peptide NP_001264005
UCSC uc033fip.1
UniParc UPI0002B8CE77
Uniprot/SWISSPROT P0DM40
Vega_transcript Fer1l5-002, OTTMUST00000128917
Vega_translation 178963, OTTMUSP00000069323
Definition protein_id:ENSMUSP00000142130
translation:
MLRVVVESASINPPLSTTPKAFVTVYFRDMMKRTRVEEGHDPIWNETLIWHLWNQPLEND
SFLKVILQDSVSKKKERFIGLATVPLKRLAQRPKEVMFVRDLILLNHSMKPTNCTVTLHV
AQIYDQDTEMTGNEELLGSTVNEVTQKKLMVSGLPMHRALASKPQHFQVRVKVFEARQLL
GNNIKPVVKVNIADQQHLTRIKMGNNPFFNEIFFQNFHEVPAKFFEENISIEVVDSAASR
SKAEIGRFQTDIGFIYHSPGHTLLRKWLGLCQRNKTTSGVRGYLKVTICALGVGDQALVD
QKLPYEQNTRVQIFKSKEVPVSLAYLQFFIYCAEDLHFGTHKSATPVLEVELIGDKLRTK
PQNPSDNPIWNQILTFQIQLPCLSSYIKFRVMDCSKYKCQDEIGSASLCLSQISSTGEEI
QGMYSGFLPCFGPSFLTLRGGKKPPFRTSEEGTCIMDAVQHGLAYRGRIFVEIVTKIKSQ
QDSVMKDLSQEVTQVEMQYYRQKYGLCVIFLSCTMMPKFKDLIQFEVSMGHYGNKTDPNY
KPLVSTTQYSPVIYDGTTYHYVPWYNTKPVVAVTSNWEDVGFRMNCLNLLHITRDRLKTN
LDILKSIRNPRDPALLQQWEKLLKELQEDCRRPLPCMTDQPRANSLDRNKWQLRSQLLQQ
LAQMAKEAKPVNMVGTAKEWLHRLNAVIPEPQESLPDVLIWLMSRQQRVAYARVPAHTVL
FSPAGPLSSGKFCGKIQNILLQYPEGEGQDTFPASLRVCMWLGNVKYSKNLKLLQQGSMV
VYAETYENQAKTRDDWGQQGLYHCPNFSDVMGRKALPKTDFKAPPGWHWKDDWVVEPQRR
LLLDIDINKSQVLEEVYENQLRNATGAWVPAAIPNTDVNGQPVEALENVKCPQGWHFKKN
WIVKLNHAVDSEGWEYGVGIPPSGLPQIWNSVEKTYHSCRRRRWVRVRFRNHKELGQERS
QEQETLSFLQMQDLSEEGKEGWEYGTFDSRFHLDPQPTSRFRRRCWHRQLAPNKDRGVAS
IFLLEGSLAVEQKDQPRKEMEKTRSWQPWKDLRHTPEDPRIPTTPFIYYILNKPHYYQLF
CYIYQARNLMYNQILTFQEPFIQVVFLNHSLCTQTLRSSAAPTWSQSIIFQHLLLFEDPK
DTRENPPLVVLELWQHDSRGNKILWGRSMWPPVVWLGLQDWVFTPLRWHPLVRELGEEEG
EILASCELILETQKLKELHPPILSIPCKDGIYLLPKNIQPTMKMMAIEIMAWGLRNMTKV
RYPQLLLECGGESLKTEPISNFQENPNFPTSTFFFTVFMPLEETHAQPLVVKVVDNQEYG
QQIVVGQANIDFLQPYFCDPWSLNYTTVKLPTLSVKKPDTFLDFVYKKFWFDSSKDEEVY
EEEVDWWSKLFWATGDADKSLNYNHKSYHTLKVYDCELEAVLTFKGLQDFCQTFKLYQEK
PKVDSPVVGEFKGLFRIYPFPEDPEAPKPPRQFSAWPEIEDFPQMCLVRVYLIRAINLQP
QDYNGLCDPYVILKLGQTKLGSRDSYYPNTLDPIFGMMYELTCNIPLEKDLEIQLFDFDL
ITADDEIGSTVIDLENRLLSGFGARCGLSKSYCKSGPFKWRDQMTPSYLLYRYAKQKGLP
PPVFDLEGDSLYYNGETFKLQSFESAPPTYKHLGPKKERLALYILNTQGLVPEHVETRTL
HSNSQPGIDQGKIQMWVDIFPKMLGPPGPQVNISPRKPKRYQLRCIIWSTAEVDLVQETF
SKEKMSDIYVKGWLFGLEEDTQKTDVHYHSLTGEATFNWRFIFTMDYLTTERACVQSQKD
YIWSLDPTSTKFPARLMIQIWDNDFFSPDDFLGVLELDLSDMPLPAQNIKQCSLKMMETD
SKWPFTPQKRISLFKKTNVTGWWPCQVLDGDKWRLSGKVKMTLEMLSEREALIRPAGRGQ
SEPNQFPMLHPPERNDSFLLWYQSPIKNFCYAVCKRYRSKIICLVVTLVIGFILLNFVYS
APSYFAMNWIKPQLRLSSPIKIVNLIGTVNTSNINSSILTMEGSTYHASHVFPEAPAP

Chromosome 1
Length
Position(start - end)
49,617
36,372,291 - 36,421,909
Orient to Chromosome plus
Link Location : (1:36372291-36421909)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Fer1l5 (ENSMUSG00000037432)
Transcript ID ENSMUST00000179162
Reports
substitution
cSNPs17
Insertion31
Deletion47
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num9
non-synonymous num8
synonymous substitutions 36374557 (p.Asp60Asp), 36378419 (p.Leu179Leu), 36403474 (p.Pro691Pro), 36403603 (p.Gly734Gly), 36416541 (p.Pro1477Pro), 36419991 (p.Arg1724Arg), 36420659 (p.Ile1820Ile), 36421201 (p.Ser1921Ser), 36421906 (p.Pro2038Pro),
non-synonymous substitutions 36373722 (p.Asp41Gly), 36375230 (p.Met97Val), 36378450 (p.Val190Ile), 36378463 (p.Asp194Gly), 36406531 (p.Arg793Lys), 36407958 (p.Lys904Glu), 36411325 (p.Val1192Ile), 36418107 (p.Ala1646Thr),
B6 transcript
(ENSMUST00000179162)
MLRVVVESASINPPLSTTPKAFVTVYFRDMMKRTRVEEGHDPIWNETLIWHLWNQPLEND
SFLKVILQDSVSKKKERFIGLATVPLKRLAQRPKEVMFVRDLILLNHSMKPTNCTVTLHV
AQIYDQDTEMTGNEELLGSTVNEVTQKKLMVSGLPMHRALASKPQHFQVRVKVFEARQLL
GNNIKPVVKVNIADQQHLTRIKMGNNPFFNEIFFQNFHEVPAKFFEENISIEVVDSAASR
SKAEIGRFQTDIGFIYHSPGHTLLRKWLGLCQRNKTTSGVRGYLKVTICALGVGDQALVD
QKLPYEQNTRVQIFKSKEVPVSLAYLQFFIYCAEDLHFGTHKSATPVLEVELIGDKLRTK
PQNPSDNPIWNQILTFQIQLPCLSSYIKFRVMDCSKYKCQDEIGSASLCLSQISSTGEEI
QGMYSGFLPCFGPSFLTLRGGKKPPFRTSEEGTCIMDAVQHGLAYRGRIFVEIVTKIKSQ
QDSVMKDLSQEVTQVEMQYYRQKYGLCVIFLSCTMMPKFKDLIQFEVSMGHYGNKTDPNY
KPLVSTTQYSPVIYDGTTYHYVPWYNTKPVVAVTSNWEDVGFRMNCLNLLHITRDRLKTN
LDILKSIRNPRDPALLQQWEKLLKELQEDCRRPLPCMTDQPRANSLDRNKWQLRSQLLQQ
LAQMAKEAKPVNMVGTAKEWLHRLNAVIPEPQESLPDVLIWLMSRQQRVAYARVPAHTVL
FSPAGPLSSGKFCGKIQNILLQYPEGEGQDTFPASLRVCMWLGNVKYSKNLKLLQQGSMV
VYAETYENQAKTRDDWGQQGLYHCPNFSDVMGRKALPKTDFKAPPGWHWKDDWVVEPQRR
LLLDIDINKSQVLEEVYENQLRNATGAWVPAAIPNTDVNGQPVEALENVKCPQGWHFKKN
WIVKLNHAVDSEGWEYGVGIPPSGLPQIWNSVEKTYHSCRRRRWVRVRFRNHKELGQERS
QEQETLSFLQMQDLSEEGKEGWEYGTFDSRFHLDPQPTSRFRRRCWHRQLAPNKDRGVAS
IFLLEGSLAVEQKDQPRKEMEKTRSWQPWKDLRHTPEDPRIPTTPFIYYILNKPHYYQLF
CYIYQARNLMYNQILTFQEPFIQVVFLNHSLCTQTLRSSAAPTWSQSIIFQHLLLFEDPK
DTRENPPLVVLELWQHDSRGNKILWGRSMWPPVVWLGLQDWVFTPLRWHPLVRELGEEEG
EILASCELILETQKLKELHPPILSIPCKDGIYLLPKNIQPTMKMMAIEIMAWGLRNMTKV
RYPQLLLECGGESLKTEPISNFQENPNFPTSTFFFTVFMPLEETHAQPLVVKVVDNQEYG
QQIVVGQANIDFLQPYFCDPWSLNYTTVKLPTLSVKKPDTFLDFVYKKFWFDSSKDEEVY
EEEVDWWSKLFWATGDADKSLNYNHKSYHTLKVYDCELEAVLTFKGLQDFCQTFKLYQEK
PKVDSPVVGEFKGLFRIYPFPEDPEAPKPPRQFSAWPEIEDFPQMCLVRVYLIRAINLQP
QDYNGLCDPYVILKLGQTKLGSRDSYYPNTLDPIFGMMYELTCNIPLEKDLEIQLFDFDL
ITADDEIGSTVIDLENRLLSGFGARCGLSKSYCKSGPFKWRDQMTPSYLLYRYAKQKGLP
PPVFDLEGDSLYYNGETFKLQSFESAPPTYKHLGPKKERLALYILNTQGLVPEHVETRTL
HSNSQPGIDQGKIQMWVDIFPKMLGPPGPQVNISPRKPKRYQLRCIIWSTAEVDLVQETF
SKEKMSDIYVKGWLFGLEEDTQKTDVHYHSLTGEATFNWRFIFTMDYLTTERACVQSQKD
YIWSLDPTSTKFPARLMIQIWDNDFFSPDDFLGVLELDLSDMPLPAQNIKQCSLKMMETD
SKWPFTPQKRISLFKKTNVTGWWPCQVLDGDKWRLSGKVKMTLEMLSEREALIRPAGRGQ
SEPNQFPMLHPPERNDSFLLWYQSPIKNFCYAVCKRYRSKIICLVVTLVIGFILLNFVYS
APSYFAMNWIKPQLRLSSPIKIVNLIGTVNTSNINSSILTMEGSTYHASHVFPEAPAP*
MSMv4 transcript
MLRVVVESASINPPLSTTPKAFVTVYFRDMMKRTRVEEGHGPIWNETLIWHLWNQPLEND
SFLKVILQDSVSKKKERFIGLATVPLKRLAQRPKEVVFVRDLILLNHSMKPTNCTVTLHV
AQIYDQDTEMTGNEELLGSTVNEVTQKKLMVSGLPMHRALASKPQHFQVRVKVFEARQLL
GNNIKPVVKINIAGQQHLTRIKMGNNPFFNEIFFQNFHEVPAKFFEENISIEVVDSAASR
SKAEIGRFQTDIGFIYHSPGHTLLRKWLGLCQRNKTTSGVRGYLKVTICALGVGDQALVD
QKLPYEQNTRVQIFKSKEVPVSLAYLQFFIYCAEDLHFGTHKSATPVLEVELIGDKLRTK
PQNPSDNPIWNQILTFQIQLPCLSSYIKFRVMDCSKYKCQDEIGSASLCLSQISSTGEEI
QGMYSGFLPCFGPSFLTLRGGKKPPFRTSEEGTCIMDAVQHGLAYRGRIFVEIVTKIKSQ
QDSVMKDLSQEVTQVEMQYYRQKYGLCVIFLSCTMMPKFKDLIQFEVSMGHYGNKTDPNY
KPLVSTTQYSPVIYDGTTYHYVPWYNTKPVVAVTSNWEDVGFRMNCLNLLHITRDRLKTN
LDILKSIRNPRDPALLQQWEKLLKELQEDCRRPLPCMTDQPRANSLDRNKWQLRSQLLQQ
LAQMAKEAKPVNMVGTAKEWLHRLNAVIPEPQESLPDVLIWLMSRQQRVAYARVPAHTVL
FSPAGPLSSGKFCGKIQNILLQYPEGEGQDTFPASLRVCMWLGNVKYSKNLKLLQQGSMV
VYAETYENQAKTKDDWGQQGLYHCPNFSDVMGRKALPKTDFKAPPGWHWKDDWVVEPQRR
LLLDIDINKSQVLEEVYENQLRNATGAWVPAAIPNTDVNGQPVEALENVKCPQGWHFKKN
WIVELNHAVDSEGWEYGVGIPPSGLPQIWNSVEKTYHSCRRRRWVRVRFRNHKELGQERS
QEQETLSFLQMQDLSEEGKEGWEYGTFDSRFHLDPQPTSRFRRRCWHRQLAPNKDRGVAS
IFLLEGSLAVEQKDQPRKEMEKTRSWQPWKDLRHTPEDPRIPTTPFIYYILNKPHYYQLF
CYIYQARNLMYNQILTFQEPFIQVVFLNHSLCTQTLRSSAAPTWSQSIIFQHLLLFEDPK
DTRENPPLVVLELWQHDSRGNKILWGRSMWPPVVWLGLQDWVFTPLRWHPLIRELGEEEG
EILASCELILETQKLKELHPPILSIPCKDGIYLLPKNIQPTMKMMAIEIMAWGLRNMTKV
RYPQLLLECGGESLKTEPISNFQENPNFPTSTFFFTVFMPLEETHAQPLVVKVVDNQEYG
QQIVVGQANIDFLQPYFCDPWSLNYTTVKLPTLSVKKPDTFLDFVYKKFWFDSSKDEEVY
EEEVDWWSKLFWATGDADKSLNYNHKSYHTLKVYDCELEAVLTFKGLQDFCQTFKLYQEK
PKVDSPVVGEFKGLFRIYPFPEDPEAPKPPRQFSAWPEIEDFPQMCLVRVYLIRAINLQP
QDYNGLCDPYVILKLGQTKLGSRDSYYPNTLDPIFGMMYELTCNIPLEKDLEIQLFDFDL
ITADDEIGSTVIDLENRLLSGFGARCGLSKSYCKSGPFKWRDQMTPSYLLYRYAKQKGLP
PPVFDLEGDSLYYNGETFKLQSFESTPPTYKHLGPKKERLALYILNTQGLVPEHVETRTL
HSNSQPGIDQGKIQMWVDIFPKMLGPPGPQVNISPRKPKRYQLRCIIWSTAEVDLVQETF
SKEKMSDIYVKGWLFGLEEDTQKTDVHYHSLTGEATFNWRFIFTMDYLTTERACVQSQKD
YIWSLDPTSTKFPARLMIQIWDNDFFSPDDFLGVLELDLSDMPLPAQNIKQCSLKMMETD
SKWPFTPQKRISLFKKTNVTGWWPCQVLDGDKWRLSGKVKMTLEMLSEREALIRPAGRGQ
SEPNQFPMLHPPERNDSFLLWYQSPIKNFCYAVCKRYRSKIICLVVTLVIGFILLNFVYS
APSYFAMNWIKPQLRLSSPIKIVNLIGTVNTSNINSSILTMEGSTYHASHVFPEAPAP*
homology99.61 (2039 / 2039)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Fer1l5 (ENSMUSG00000037432)
Transcript ID ENSMUST00000179162
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........GCATGTGTCAAAGTAGCATTTCTTTGGATTGTGACAGAATGCCTAGTCTT
AGAAATTGCATTTTGAATGGCTGACTTGGGCTTCCTAAAACAATCGTTAAGTGAATTTTA
GCTTGGTATCAGGGCATACTGCCCAATCATTTCTGAGAACACTTCTGCCATTTTATAGCC
TGTCTTTATATGAAGTAGCTTTCTTAGCATTAATTACTATAAAATCAAACTACCTATCCC
CTCAGAGGCAGAAGGATTAGGAATTCAAGAACAGCCTCAGCTATACAACAGTAAGTCAGA
GCCAACCTGGGCTATGTGAAACCCTGTCCCCCAAATTAAAAAAAAAAAAAATCAAAGGAA
AAAAGAGGCCAAATGTTTTACTTTTCCATTAGAAAGACCTCCCCTTGGGTTAGAGATGGT
TCAGGGGTTAAGAGAACTGACTGTTCTTCCAGAGGTCCTAAGTTCAATTCCCAGCAACCA
CATGGTGGCTCACAGCCATTTGTAATGGGATCCGATGCCCTCTGCTGGTGTGTCTGAAGA
CAGCCACAGTGTACTCATATACATAAAATAAATAAATCTTAAAAAGAAAAAAGAAAGCCC
TCCCCCTCCCATGAGGCAACATGGATTTTCCTGTATATAGATCTTGATGGTCTCACTTCT
TGTATTTTCTCATCTAAATTGCATGACTTTGCCAGTAATTCATTCCAGACAGAAGAGAAT
TCTGTGCCTGACTTTGAACTCAAAAGGTCAGTAACAGAAGAAAAGGAAGGAGGAGTCCTC
AAAGCAGGGAGGTCGATTGTCTGTGTGGGCCTCAAGCCACTTGTCTTATCTACACTCTGT
CATGTGTCCTTCACCTCCCAGAGATTCTCTTTGGAACCAAGAACCTCTTATCTCTGTGAT
GTTCCTCTTGTTGCTAAGCTCCACTCACCCTGTGAACCTGGGACGGAGGAGCTCCAAGGA
GCAAGAGGTGGCCCTGTGCAGGGGAGGAGGAGCGGGAACAAGCGTCCAAG
1 EXON 1 36,372,291 36,372,375 - 1 85
ATGCTGAGGGTTGTTGTGGAGTCCGCTTCGATTAACCCTCCCCTCAGCACCACACCCAAA
GCTTTCGTAACTGTCTACTTCAGAG
INTRON 1 - 2 36,372,376 36,373,685 1,310
GTGAGAACCCAGTTCCAAAAGGCTA..........TCCCAGCCCCTTGGTGTCTTTGCAG
2 EXON 2 36,373,686 36,373,738 1 0 53
ATATGATGAAAAGAACTCGAGTGGAGGAAGGACATGGCCCCATATGGAATGAG
INTRON 2 - 3 36,373,739 36,374,515 777
GTAGACACTCCGTGGCCATCCTGGA..........ACTGATTTCTTTCTGCCCCTCACAG
3 EXON 3 36,374,516 36,374,607 0 2 92
ACCCTAATCTGGCACCTCTGGAATCAGCCACTGGAAAATGATTCCTTCCTGAAAGTCATA
CTTCAGGACTCGGTTTCTAAAAAGAAAGAAAG
INTRON 3 - 4 36,374,608 36,375,171 564
GTAAGGCAGAAAGAGGCAGGAAGAG..........CACACCTACCCCTTGCCTCCCCCAG
4 EXON 4 36,375,172 36,375,280 2 0 109
GTTCATTGGCCTGGCCACTGTACCGCTCAAGCGGCTGGCACAAAGACCGAAAGAAGTCGT
GTTTGTGAGGGACCTGATCCTGCTCAACCATTCCATGAAGCCCACTAAC
INTRON 4 - 5 36,375,281 36,376,728 1,448
GTGAGTCAGGCACCAGGCAGCCCAG..........CCAAGCCCCTCCCTTTGCTTTGCAG
5 EXON 5 36,376,729 36,376,783 0 1 55
TGTACTGTCACCCTACATGTGGCCCAAATATACGACCAGGATACTGAGATGACAG
INTRON 5 - 6 36,376,784 36,377,854 1,071
GTATGTCTTTTTCTAGGGCATTATC..........TGTCCACCCTGGACTTTTTCCGTAG
6 EXON 6 36,377,855 36,377,964 1 0 110
GCAATGAGGAGCTCCTGGGCTCAACTGTAAATGAGGTGACCCAGAAGAAACTAATGGTCT
CTGGCCTCCCCATGCACAGGGCTCTGGCTTCCAAGCCTCAACACTTTCAG
INTRON 6 - 7 36,377,965 36,378,386 422
GTGAGAGACTAGAAGGGAGGGGAGG..........GATCTATTGGGTGTCCCCTCTGTAG
7 EXON 7 36,378,387 36,378,515 0 0 129
GTCCGGGTGAAGGTGTTTGAAGCCCGACAGCTTCTGGGCAACAACATCAAACCTGTAGTA
AAGATAAACATTGCAGGTCAGCAGCATCTCACTCGGATCAAGATGGGAAACAATCCTTTC
TTCAATGAG
INTRON 7 - 8 36,378,516 36,379,477 962
GTAGGCTAAACAAGCCATGTAGGGC..........CCAGCCCCCATTCTCTCTGCTCCAG
8 EXON 8 36,379,478 36,379,540 0 0 63
ATATTCTTCCAGAATTTCCACGAGGTTCCTGCAAAGTTCTTTGAGGAGAACATCTCAATC
GAG
INTRON 8 - 9 36,379,541 36,380,363 823
GTAAGGGGTCAAACTGGTTTCCAGT..........AGATCTTTCTGGAAACTCTCCACAG
9 EXON 9 36,380,364 36,380,414 0 0 51
GTCGTGGACTCTGCAGCATCAAGATCTAAAGCAGAGATTGGGAGATTCCAA
INTRON 9 - 10 36,380,415 36,382,784 2,370
GTGAGCCCTGATGGAGGAGGAGGCT..........TAATCTTCATTTTACTCTTTTTCAG
10 EXON 10 36,382,785 36,382,815 0 1 31
ACAGACATTGGGTTTATCTACCATTCCCCAG
INTRON 10 - 11 36,382,816 36,385,084 2,269
GTAGGTGACAGATAATGCAAACATT..........TCTCACATTGGCTCTGCCTCCCCAG
11 EXON 11 36,385,085 36,385,200 1 0 116
GTCACACACTCCTGAGGAAATGGTTAGGCCTCTGTCAGCGAAATAAGACCACCAGTGGAG
TCAGAGGCTACTTGAAAGTCACCATCTGTGCCCTCGGTGTAGGGGATCAGGCGCTG
INTRON 11 - 12 36,385,201 36,385,437 237
GTGAGGCTGCCACCTTCTTCTCAAT..........CTGTCCACTTCTCTGGCATCTGCAG
12 EXON 12 36,385,438 36,385,558 0 1 121
GTAGATCAAAAGCTGCCCTATGAGCAAAACACCCGGGTCCAGATCTTCAAGTCAAAAGAA
GTTCCAGTCAGTCTGGCTTACTTGCAGTTCTTCATCTACTGTGCAGAGGATCTCCATTTC
G
INTRON 12 - 13 36,385,559 36,386,090 532
GTTAGAGCCTGTGGGAAGGGAGAGG..........GAAGTCCTTTTATCTCCTGTTCTAG
13 EXON 13 36,386,091 36,386,143 1 0 53
GCACCCACAAGTCAGCCACTCCTGTGTTGGAGGTGGAGCTGATTGGGGACAAG
INTRON 13 - 14 36,386,144 36,387,180 1,037
GTAGGTACAGAAAGGGTCTGAGATC..........TGACTAAGCCTCGGGATGTTCTCAG
14 EXON 14 36,387,181 36,387,249 0 0 69
CTCAGGACAAAACCACAGAACCCGTCCGACAACCCAATATGGAACCAAATCCTCACCTTC
CAGATTCAG
INTRON 14 - 15 36,387,250 36,388,585 1,336
GTATGGCTACTCCATCATGCCCTCC..........CAATGCCACCTGTCTTCCCTTGCAG
15 EXON 15 36,388,586 36,388,629 0 2 44
CTACCCTGCCTCTCTAGCTACATCAAATTCAGAGTCATGGACTG
INTRON 15 - 16 36,388,630 36,388,716 87
GTGAGTAAACGGGCTAGAGGCAGAT..........GCTCAGCCTGCAGTGTGTTTCCCAG
16 EXON 16 36,388,717 36,388,799 2 1 83
CTCCAAATACAAATGTCAGGATGAGATTGGGTCAGCCAGCTTGTGCCTCAGCCAGATCTC
GTCCACCGGCGAGGAGATCCAAG
INTRON 16 - 17 36,388,800 36,388,890 91
GCAAGCAAATCCTGGGACCCCTCCC..........CTGAGTTCACTCTATCTCCTTCCAG
17 EXON 17 36,388,891 36,388,985 1 0 95
GGATGTACTCTGGCTTCCTGCCCTGCTTTGGCCCCAGCTTCCTGACTCTCCGTGGGGGCA
AGAAGCCCCCTTTCAGGACCTCAGAGGAAGGCACT
INTRON 17 - 18 36,388,986 36,390,527 1,542
GTAAGTTTGTCCTGTCAGCTTGCGG..........CAGCCCTTTCTCTCTGTTGCTCCAG
18 EXON 18 36,390,528 36,390,656 0 0 129
TGCATCATGGATGCTGTCCAGCATGGTTTAGCTTACCGTGGCCGAATCTTTGTGGAGATA
GTCACCAAGATCAAGTCTCAGCAAGACTCGGTAATGAAGGACCTGTCTCAGGAAGTGACC
CAGGTGGAG
INTRON 18 - 19 36,390,657 36,392,302 1,646
GTAATCACAGGAGACAAGCAACCTA..........CCCATGTTTGTGGTTATTGTTTTAG
19 EXON 19 36,392,303 36,392,480 0 1 178
ATGCAATATTACCGCCAAAAGTATGGGCTGTGCGTCATCTTTCTCTCCTGTACCATGATG
CCCAAATTTAAGGACCTGATTCAATTCGAGGTCAGCATGGGCCACTATGGAAACAAGACG
GATCCAAACTACAAGCCTCTTGTGTCCACCACACAGTACAGCCCGGTGATATACGACG
INTRON 19 - 20 36,392,481 36,401,353 8,873
GTAACTGTCAGATTCAAGCAGAAAC..........TCCATCCTGTGTCTCTGTGACTTAG
20 EXON 20 36,401,354 36,401,478 1 0 125
GCACTACCTACCATTATGTGCCCTGGTACAACACGAAGCCTGTGGTGGCTGTGACCTCCA
ACTGGGAGGATGTTGGCTTCCGAATGAACTGCCTCAACCTCCTCCACATCACCCGGGATC
GCCTG
INTRON 20 - 21 36,401,479 36,402,496 1,018
GTAAGAGTGCAGGAGAGAGCTGGGG..........TCTCTCCCTTTCTCTCAATGGGCAG
21 EXON 21 36,402,497 36,402,597 0 2 101
AAAACCAACCTGGACATCCTGAAATCCATACGGAATCCCAGGGATCCAGCTCTGCTCCAA
CAGTGGGAGAAACTGCTGAAGGAGCTGCAGGAGGACTGCCG
INTRON 21 - 22 36,402,598 36,403,216 619
GTAGGAACTGAGTACCCTGGCTGGG..........TCTTCCTAACCTGTCCTGGCTACAG
22 EXON 22 36,403,217 36,403,394 2 0 178
GCGCCCTCTGCCTTGTATGACTGATCAGCCCAGAGCTAACAGCTTGGACAGGAATAAATG
GCAGCTTCGCAGCCAGCTTCTGCAGCAACTAGCACAAATGGCCAAGGAAGCCAAGCCGGT
GAACATGGTGGGCACGGCCAAGGAGTGGTTGCACCGTCTCAACGCTGTGATCCCTGAG
INTRON 22 - 23 36,403,395 36,403,471 77
GTAGGCACTGGCTACACTGGCTGGA..........TCCTGATGCTCTCCCATCTTGGCAG
23 EXON 23 36,403,472 36,403,627 0 0 156
CCACAGGAGAGCCTCCCAGATGTGCTGATCTGGTTGATGTCCAGGCAGCAGCGAGTGGCC
TATGCTCGGGTTCCTGCCCACACTGTCCTGTTCTCCCCAGCAGGACCCCTGAGCTCTGGC
AAGTTCTGTGGAAAGATTCAGAACATCCTCTTACAG
INTRON 23 - 24 36,403,628 36,404,753 1,126
GTGGGGGAAAGGGGTGTCTTCCAGG..........TGGGACTGATCTGCCTCTGGCTCAG
24 EXON 24 36,404,754 36,404,882 0 0 129
TACCCAGAAGGTGAAGGACAGGACACATTCCCAGCCTCCCTCCGGGTCTGTATGTGGCTT
GGCAATGTCAAATACAGCAAGAATCTGAAGCTGCTCCAGCAGGGCTCCATGGTGGTGTAT
GCAGAGACG
INTRON 24 - 25 36,404,883 36,406,508 1,626
GTGAGTGGACAGATATCGGGGTAAT..........ATTGACTGGCATTCCCCTCCCCCAG
25 EXON 25 36,406,509 36,406,672 0 2 164
TATGAGAATCAGGCCAAGACCAAAGATGACTGGGGACAACAAGGGCTATACCACTGCCCC
AACTTCTCCGATGTCATGGGACGCAAGGCTCTCCCCAAGACAGACTTCAAGGCTCCCCCG
GGATGGCATTGGAAGGACGACTGGGTAGTAGAGCCTCAGAGGAG
INTRON 25 - 26 36,406,673 36,406,928 256
GTAAGGAGGGTTCAAGCCCTGACCA..........AACTTGGGGTATCACTGCTGCCCAG
26 EXON 26 36,406,929 36,407,043 2 0 115
ACTCCTCCTGGACATAGACATCAACAAGAGCCAGGTGCTGGAAGAGGTGTATGAGAACCA
GCTTCGCAACGCCACAGGTGCCTGGGTGCCTGCAGCTATCCCCAACACGGACGTG
INTRON 26 - 27 36,407,044 36,407,882 839
GTAAGCATCCCCATCCTGCCATAGG..........TCCTCCATCCTCAACATCCCTACAG
27 EXON 27 36,407,883 36,407,985 0 1 103
AATGGACAGCCTGTGGAAGCCCTGGAGAACGTGAAGTGTCCCCAAGGCTGGCACTTTAAG
AAGAATTGGATTGTGGAGCTCAACCACGCAGTCGACAGTGAAG
INTRON 27 - 28 36,407,986 36,408,494 509
GTCAGTCTCCCGACAAGTCAGCCAT..........AGAGGTCACGATGCTGCTCCTGCAG
28 EXON 28 36,408,495 36,408,670 1 0 176
GCTGGGAGTATGGCGTGGGGATCCCACCTTCCGGCCTGCCCCAGATCTGGAACTCGGTGG
AAAAGACTTACCACTCATGCCGCCGGCGACGGTGGGTGCGCGTGCGCTTTCGAAACCACA
AGGAGCTGGGCCAGGAGCGGAGTCAGGAGCAGGAGACCCTCTCCTTCCTGCAGATG
INTRON 28 - 29 36,408,671 36,408,772 102
GTAAGACATTTGGGGCGAGGGTCCT..........TGAGACCCTGCGTTCTTCCCTGCAG
29 EXON 29 36,408,773 36,408,943 0 0 171
CAAGACCTCTCTGAGGAAGGAAAGGAAGGCTGGGAGTATGGCACGTTCGACTCCAGGTTT
CACCTGGACCCTCAGCCCACAAGCCGCTTCCGTCGCCGCTGCTGGCACCGACAGCTGGCG
CCCAACAAGGACAGGGGTGTAGCTTCCATATTCCTCCTGGAGGGATCCTTG
INTRON 29 - 30 36,408,944 36,409,141 198
GTAAGGCTTCCCGGATTGGGTGACA..........ACTTGGGGCCCCTTTCTGGCCACAG
30 EXON 30 36,409,142 36,409,274 0 1 133
GCAGTGGAGCAGAAAGACCAACCTAGGAAGGAGATGGAGAAGACGAGGTCGTGGCAACCC
TGGAAGGACTTGAGGCACACCCCAGAGGATCCCCGGATCCCCACCACGCCTTTCATTTAC
TACATCCTCAACA
INTRON 30 - 31 36,409,275 36,409,379 105
GTAAGCCTGGCCTGGGCGGCTACTG..........CCGAATGAGACTTCTCTTTATCCAG
31 EXON 31 36,409,380 36,409,457 1 1 78
AGCCTCACTACTACCAGCTCTTCTGCTATATCTACCAGGCCCGGAATCTGATGTACAACC
AGATCCTGACCTTTCAGG
INTRON 31 - 32 36,409,458 36,410,861 1,404
GTAGGAATGCCCCTTTACCATTCAG..........ATCCTGCCCTCCCTCCATGAATTAG
32 EXON 32 36,410,862 36,411,043 1 0 182
AGCCTTTCATCCAAGTGGTCTTCCTGAACCACAGCTTGTGCACCCAGACCCTGCGAAGCT
CTGCAGCTCCGACCTGGTCCCAGTCGATCATCTTCCAGCACCTTCTGCTGTTTGAAGACC
CCAAAGATACCAGAGAGAACCCCCCACTTGTGGTGCTGGAACTGTGGCAACATGACTCAC
GG
INTRON 32 - 33 36,411,044 36,411,228 185
GTACAGTGGACTGGGCTTAAGGGAA..........TTCTATGAACTCCCTTCACTTCTAG
33 EXON 33 36,411,229 36,411,390 0 0 162
GGAAACAAGATCTTGTGGGGACGGAGCATGTGGCCCCCAGTCGTCTGGCTGGGCCTCCAA
GACTGGGTCTTTACCCCGCTGAGATGGCACCCCCTTATAAGAGAGTTGGGAGAGGAAGAG
GGTGAGATCTTGGCATCCTGTGAGCTGATCCTAGAGACACAG
INTRON 33 - 34 36,411,391 36,411,561 171
GTACAGATGGGCTCAGGATGGATTC..........CCGCTTTCCCTCTTCTGCCCTCCAG
34 EXON 34 36,411,562 36,411,666 0 0 105
AAGCTGAAAGAGCTACACCCGCCTATCCTAAGCATCCCCTGTAAGGATGGGATTTACTTG
TTGCCCAAGAACATTCAGCCTACCATGAAAATGATGGCCATTGAG
INTRON 34 - 35 36,411,667 36,412,556 890
GTGTGTGCGGATGGGGAGAGGTGGG..........CTGCCCCTTGCCCTGGTTCTGACAG
35 EXON 35 36,412,557 36,412,703 0 0 147
ATCATGGCCTGGGGCCTTCGGAACATGACGAAGGTGCGTTACCCCCAGCTCCTGCTGGAA
TGTGGGGGTGAGTCCCTGAAGACAGAACCCATCAGCAACTTCCAGGAGAACCCCAACTTC
CCTACGTCCACCTTCTTCTTCACGGTG
INTRON 35 - 36 36,412,704 36,412,778 75
GTAAGAGGCCCTGGGCAGGGGCTGG..........CACGTGCCCCTCTTTGGGCTTGTAG
36 EXON 36 36,412,779 36,412,941 0 1 163
TTCATGCCTCTGGAGGAGACCCATGCACAGCCCCTGGTGGTGAAAGTGGTGGACAACCAG
GAATATGGCCAGCAGATTGTGGTCGGTCAGGCCAACATCGACTTCCTCCAGCCCTATTTC
TGTGACCCGTGGTCTCTGAACTACACAACTGTAAAGCTGCCAA
INTRON 36 - 37 36,412,942 36,413,089 148
GTAGGGCTCTTTCACCTGGCCTTGT..........CCTCATGACTATGTTCTCTCCACAG
37 EXON 37 36,413,090 36,413,115 1 0 26
CTCTGTCTGTGAAGAAGCCTGATACT
INTRON 37 - 38 36,413,116 36,414,775 1,660
GTGAGTAAGAGTCCCAGGCTACCTT..........TTCTCTAACCTTCCTTACTTTTCAG
38 EXON 38 36,414,776 36,414,826 0 0 51
TTCCTAGACTTTGTCTACAAGAAGTTCTGGTTCGATTCCAGCAAAGACGAG
INTRON 38 - 39 36,414,827 36,414,932 106
GTAAAGCAGACTCAGACCCGGGAAG..........CCAACAAAGGCTTCTTCTCCGTTAG
39 EXON 39 36,414,933 36,415,037 0 0 105
GAGGTCTATGAAGAGGAGGTGGACTGGTGGAGCAAGCTATTCTGGGCCACAGGAGATGCA
GACAAGTCCTTGAACTACAACCACAAAAGCTACCACACCCTAAAG
INTRON 39 - 40 36,415,038 36,415,590 553
GTTTGGAGGGTACTGGGAAAGGGGT..........CCAGGTCCTGCATACACCCCTACAG
40 EXON 40 36,415,591 36,415,710 0 0 120
GTATATGACTGTGAGTTGGAGGCCGTTCTGACCTTCAAGGGCCTGCAGGACTTTTGCCAG
ACCTTCAAACTTTACCAAGAGAAGCCCAAGGTGGACAGTCCCGTGGTAGGGGAATTCAAG
INTRON 40 - 41 36,415,711 36,416,466 756
GTGTGTCTACGCTAGTTTGGCTGCC..........ACTACCAACACCTTCTCACCCCCAG
41 EXON 41 36,416,467 36,416,628 0 0 162
GGCCTCTTCCGCATCTACCCCTTTCCGGAGGACCCAGAGGCCCCTAAACCCCCACGTCAG
TTCTCGGCTTGGCCTGAGATAGAGGACTTCCCTCAGATGTGTTTGGTACGGGTGTACCTG
ATACGAGCCATCAACCTGCAGCCACAGGACTACAATGGCCTG
INTRON 41 - 42 36,416,629 36,416,872 244
GTAAAAAACAAACAAACAAACAAAC..........CTCCTCTTCCTTCCTTCCTTCCCAG
42 EXON 42 36,416,873 36,416,964 0 2 92
TGTGACCCTTATGTGATCCTGAAACTGGGACAGACAAAGCTTGGCAGCCGGGACTCATAC
TACCCCAACACTCTGGATCCCATCTTTGGCAT
INTRON 42 - 43 36,416,965 36,417,364 400
GTGAGCCACCGTCCCCAGTCACCCA..........CCATTTTGCAATGCCTTTTCTCTAG
43 EXON 43 36,417,365 36,417,535 2 2 171
GATGTATGAGCTCACCTGTAACATCCCGCTGGAGAAGGACCTGGAGATCCAGCTGTTTGA
CTTTGACCTCATTACTGCTGATGATGAGATTGGAAGTACTGTCATTGACCTTGAGAACCG
ACTTCTGTCTGGCTTTGGGGCCCGTTGTGGGCTCTCTAAATCCTACTGCAA
INTRON 43 - 44 36,417,536 36,417,723 188
GTGAGTGTGGACCCACTCAGCAAGC..........CTGTTCCTCTTGCATACTCCCACAG
44 EXON 44 36,417,724 36,417,872 2 1 149
GTCAGGGCCCTTTAAGTGGAGGGATCAGATGACCCCGAGCTACCTTCTGTACCGATATGC
CAAACAGAAAGGGCTGCCTCCACCTGTATTTGACCTTGAGGGAGATTCACTTTACTACAA
TGGGGAAACGTTCAAGTTGCAGAGCTTTG
INTRON 44 - 45 36,417,873 36,418,101 229
GTGAGCCCAGCACACTTCCAGACAG..........CTTCATGATCCTGTTTCAAATCCAG
45 EXON 45 36,418,102 36,418,241 1 0 140
AGTCCACACCCCCTACCTACAAGCATTTGGGGCCTAAGAAGGAGCGCCTGGCACTGTACA
TCCTGAACACCCAGGGACTGGTTCCTGAGCATGTAGAGACTCGCACACTGCACAGTAACA
GCCAGCCTGGTATTGACCAG
INTRON 45 - 46 36,418,242 36,419,679 1,438
GTATGTGACTGGAAAGGCTGTTCCT..........ACCAGCAAATCCATTCTGACTCTAG
46 EXON 46 36,419,680 36,419,768 0 2 89
GGAAAAATACAAATGTGGGTGGATATCTTCCCCAAGATGCTGGGGCCTCCTGGGCCGCAA
GTCAACATCAGCCCCAGGAAGCCTAAACG
INTRON 46 - 47 36,419,769 36,419,978 210
GTGAGTACGCTAAAGCTCAGCTCCT..........TAGCCTCAGAGCACAGTGGCTGCAG
47 EXON 47 36,419,979 36,420,074 2 2 96
GTACCAACTGCGCTGTATCATCTGGAGCACAGCTGAAGTGGACCTGGTCCAAGAGACCTT
CAGTAAAGAGAAAATGAGCGATATCTACGTGAAAGG
INTRON 47 - 48 36,420,075 36,420,241 167
GTAAGGCAGGCAGGGGAGGAGGGCT..........CAAGGTAAAAGGACTCTGTCCCCAG
48 EXON 48 36,420,242 36,420,383 2 0 142
GTGGCTCTTTGGGCTAGAGGAGGATACTCAGAAGACAGATGTCCACTACCACTCCTTGAC
TGGGGAGGCCACCTTCAACTGGAGGTTCATCTTTACCATGGACTATCTGACAACGGAGCG
TGCATGTGTCCAAAGTCAGAAG
INTRON 48 - 49 36,420,384 36,420,596 213
GTAAGGAAGGGGTGGGGAGGAGAAA..........CTAACAGCCTTCTGCTATCCTCCAG
49 EXON 49 36,420,597 36,420,696 0 1 100
GACTACATATGGAGCCTGGATCCCACATCAACGAAGTTTCCAGCCCGGCTCATGATCCAG
ATATGGGACAATGACTTCTTTTCCCCAGATGACTTCTTAG
INTRON 49 - 50 36,420,697 36,420,772 76
GTGAGGTCCTGATGTAGGGTTTGTG..........GACAACAGCCTTTCTCTGGCCTCAG
50 EXON 50 36,420,773 36,420,963 1 0 191
GGGTCTTGGAGCTGGATTTATCAGACATGCCCCTTCCGGCTCAGAACATCAAGCAATGTT
CCCTCAAGATGATGGAGACTGACTCCAAATGGCCTTTCACCCCACAGAAGCGTATCTCTC
TCTTTAAGAAGACCAATGTAACTGGATGGTGGCCTTGTCAGGTCCTAGATGGTGACAAGT
GGCGTTTGTCG
INTRON 50 - 51 36,420,964 36,421,126 163
GTAGGGGCTGGGGAATGTGTTTAGT..........CTGCTCTGTCCTTTGGTATTGCTAG
51 EXON 51 36,421,127 36,421,236 0 2 110
GGTAAAGTCAAGATGACTCTTGAGATGCTATCAGAGAGAGAAGCTCTAATCAGGCCAGCC
GGCCGAGGCCAGTCGGAACCCAACCAGTTCCCTATGCTTCATCCTCCTGA
INTRON 51 - 52 36,421,237 36,421,480 244
GTAAGGGCCCTGGAGGGCGGTGGTG..........TGCTCTCTGTCCCTGTCACGGGCAG
52 EXON 52 36,421,481 36,421,628 2 0 148
GCGAAATGATTCCTTCTTACTGTGGTACCAGTCACCTATTAAAAACTTCTGCTATGCTGT
CTGCAAACGCTACCGCTCCAAAATCATATGCTTAGTGGTGACACTGGTTATAGGGTTTAT
ACTGCTCAACTTCGTCTATTCTGCTCCG
INTRON 52 - 53 36,421,629 36,421,738 110
GTGAGTGCTAACCCATGGGGAAGGG..........CTACTCTGATGTCTCTTTTCTCTAG
53 EXON 53 36,421,739 36,422,107 0 - 369
AGCTATTTCGCTATGAACTGGATCAAACCTCAACTCCGGCTGTCTTCTCCCATTAAAATA
GTCAATCTCATCGGTACGGTGAACACCAGCAATATCAACTCTTCCATTCTCACCATGGAG
GGCTCAACATATCACGCAAGCCATGTCTTCCCAGAGGCTCCAGCTCCGTGAGGCTCCATG
ATCTGGCCTTCCTTTCTCCCACCTGCCAAGTACCCTGTGCCTCGGGCTTCCTGGCAGATC
TTGTTTGAGTCTTCTAGGGCACATCAAAGAAGCTGTGCACACTCTGACTCATACATGTTT
AGAGATCACTTCTGACAAGAAGAGCAGAGCTGTAATTTTCTATTGAAATAAATTCATTTT
TCTAACAGA
3' upstream sequence
GCCAACCTAAGACTTGGGGGTTGGGATGGAAGACAATGTGAAAGGCTGAAAATGGCATCT
CTGTGAGACTTGGGGAGTGATGCCACATTTAATCACCCTATTTAGTCCTCGGCAGGGGAA
GGGTAACCGTGTGCCATACATCGAGGCCACAGCTTCCACTCAAGTGTGAGGGCACAAGAG
CCGCACCAGGACAGGCACCACCTCCAGCCTTACTCAGCATGGAAAACATTTGCTTCTGCA
ACAATAATAAAACCAGAGCTGGGGCAGGATGCAGGATGCTGGATGGGTAGGGTTTGTTTT
TAATTGGCTTGGTTTTTTGTTTTCAATTTTTCAAGATAGGGTTTCTCTGTATAGTTCTGT
CTGTCCTGGAACTTGCTCCATAGACCAGGCTGGCCTTGAACTCAGAGACCCACTGGCCTT
TGCCTCTGAGTGCTGGGATTAAAGGTGTGTGCATGGGTGGCTTTCTTATACACATTTTTC
AAAAGGGAAAAGACTAGTTCCCAGGCTACATGAGGACTGCAGAGCCTCTCTTCTGGTCTC
TTTCAAAGCATCAAGGTGCTCATGAGCAGGAGTTAGGCTAACCTGACTCACTCTCTCACT
CTTCCTGTGGGCAAATCCTTTCAGTCCCGTGGCAGTGAGAGTCATCTCAACAGACCACTT
AGATCCTCTACCATGGGACCCACTCAATCTACCTTTGAGATAAACTCAAAGCAGACAAAA
CTACGATTACTTTTCAGCACTCCTAATACTAGAGCCAACCTATATTCCAGCTTGTTCCCT
GGTTCCCCTTAAGCTGTTATGCTACTGAGGGAAGGTGTAAGGCTTCCTGCACCCCATCTT
TTTTTCTCCTGCGTAAGGACAACACAGACTCCCATAGACAGGGGGCTGAGATGAACTCTC
ACCTGCAGCTAGGGTGACCTTCCTCCTCGTCTATGGACGGATGGGGTAAGGGATGGGTGA
GGGTTTTCCCAACCATCCAGGAGGGGCAGGATGACAGCAG..........

Sequence Detail Report

Gene Symbol (Gene ID) Fer1l5 (ENSMUSG00000037432)
Transcript ID ENSMUST00000179162
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 2039 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information