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Target CDS Information

Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Cross Reference
EMBL AC084389, AC123854
GO GO:0002682, GO:0003674, GO:0005575, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0008150
MGI_trans_name Tmem131-007
OTTP OTTMUSP00000068814
OTTT OTTMUST00000126158
UniParc UPI00053BD7D1
Uniprot/SPTREMBL A0A0A6YW65
Vega_transcript OTTMUST00000126158, Tmem131-007
Vega_translation 179004, OTTMUSP00000068814
Definition protein_id:ENSMUSP00000141413
translation:
MLDFHEQPVGMPKMEKVYLHNPSSEETITLVSISATTSHFHASFFQNRKILPGGNTSFDV
V

Chromosome 1
Length
Position(start - end)
30,858
36,841,672 - 36,872,531
Orient to Chromosome minus
Link Location : (1:36841672-36872531)
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Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000185964
Reports
substitution
cSNPs0
Insertion87
Deletion78
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num0
non-synonymous num0
synonymous substitutions
non-synonymous substitutions
B6 transcript
(ENSMUST00000185964)
MLDFHEQPVGMPKMEKVYLHNPSSEETITLVSISATTSHFHASFFQNRKILPGGNTSFDV
V
MSMv4 transcript
MLDFHEQPVGMPKMEKVYLHNPSSEETITLVSISATTSHFHASFFQNRKILPGGNTSFDV
V
homology100.00 (61 / 61)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000185964
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........TGTGGTGTGCTGGTGAGGAGGCAGAGGTGATTCGGGTAGAGGGATTACCT
AGAAAGTAGGCCCTGGGGTGACCAGCATGGCAGTGGCCAGAGACACGATTCACAAAGCCA
GGAGGTGAGAAGAAGGGACAGCTGTCAAAGACCATGGTGAGACAGATTGTGTAGCTTTTG
GAGCCATCAGAAGCTCTTTGGCTTTGACCCTGAGATGGGATCTCTGCAGGAGTGTTAAGT
ATAAAACACAGGCCACCCAAACTATACAGATGCATACAAATCAAAGGCACTTGCTGGAGA
AGCAGTTTGTGAGTTGGGAAAAGTCAAGGAAAAGATGGAAGACAGAGGGAGGGAGGGTGG
TCCCTGGTGGTTATGCTAATTGAGGATAAAAAATTCCGGGTAGGACAAAATAACAATGAC
AGATCCTTTTGCTCGCAGGACTGGAACAAGTCTGCCATTGGATCAAATAAGGACCCATAG
TGGGGTCACTCAGAGTTCTGGTACGTTCCTTGATCAGCTCCAGTTGGTCAGAACCAGGTA
TTGCAGCAGCGCATTCCAAGGTGATGTCTCAAGGGCTGAGGCCAGTAGTAGAAATTTTCC
CTTTTCCAGGTGGATGAGGAGATCTATCCTGCTTTAGCTGAAATGCAGAGAGATGGCAGA
GCCCGTAAAGGAGCCCGGCAGGAGAGGCCACAAGCAGTTTGGGACTGAACAGAGTGCAAT
GCCTAGTTTGTTTTTTTTTTTTTTTTTTTCACTGAACAATTTGAGGGCTGGAGTTGCCCT
GGAGATAAGAACAGTGGTGGGTGGAGTAGGCTTGGGGAAGGGAAGATTAGAGGTCATCCC
AGTTTAAGATGACTGTGAGACAAGTGCGTGGAAACAGCAGAGGCAGGAGGCAGGCTGGTA
TGTAAAGCTGCACCTGGAGGTGTGGGTAGCATTGAGTGGCAGGGAACCGTGTGCAAGTGT
GCATCATTTGGGGAGCCAGAGACACAGGACTCCAGGGATCCCAACACTAT
1 EXON 1 36,943,411 36,943,666 - - 256
CTTCCTTCCTGCTTCTGTCTTTGTGCGTGTGTGTGTGTGCTCAAATATATAAGAACACTA
ATACACACATACATACACACAAGGGGGGTAATCAATGGTGTGTTGGTGAGGAGGTGGAGG
TGCTTCAGGGAGCAGCCAGAGACACTGAGCTACACCTTGCCTAGAGGATGCAGGAGGAAC
AGCCATCGAGGACCATGGTGAGCCTGGATGTGTGGAGCTGTGGGAGCCATCATGAGGGCT
TTGGCTCTGACCTGAG
INTRON 1 - 2 36,889,326 36,943,410 54,085
GTGGGGATTCCCCTTAAATATTCTG..........GATGTTTGGTTTGTTTTCTTGACAG
2 EXON 2 36,889,264 36,889,325 - - 62
CATTCATTCAGTCGGAGAGCATAATAGAAGTCCTGCGCTTTGACGACGGAGGGCTACTAC
AG
INTRON 2 - 3 36,881,375 36,889,263 7,889
GTAATTCTCTTGAGTAATATGACTA..........CATTCTTGTTTTCTTCCTCTTACAG
3 EXON 3 36,881,334 36,881,374 - - 41
ACTGAGACAACACTTGGCCTCGGTTCATATCAACAGAAAAG
INTRON 3 - 4 36,872,581 36,881,333 8,753
GTAAGTAGGACTCACGTGGCATCAT..........TCACACTTTTTCTTTTTCTTTCCAG
4 EXON 4 36,872,512 36,872,580 - 2 69
CATTTCTCTGTACCGGGGTAATTGCAGGCCCATACGATTCGAACCGCCCATGCTGGATTT
CCATGAGCA
INTRON 4 - 5 36,854,968 36,872,511 17,544
GTAAGTAACTTGGAGCTATATGACA..........GACAGTTTCCTTTTTATTTTTGCAG
5 EXON 5 36,854,844 36,854,967 2 0 124
GCCAGTTGGAATGCCAAAAATGGAAAAAGTCTACTTACATAACCCTAGTTCTGAAGAAAC
GATTACTTTAGTATCAATATCTGCTACCACATCACATTTCCATGCATCGTTTTTTCAAAA
TAGG
INTRON 5 - 6 36,841,711 36,854,843 13,133
GTAAGCTTGTCTACTAAAAATTACT..........TAATTTTCTTACTTTTCTTTTTCAG
6 EXON 6 36,841,672 36,841,710 0 - 39
AAAATTCTTCCAGGAGGAAACACATCATTTGATGTAGTT
3' upstream sequence
TTTCTTGCAAGAGTAGTAGGAAATGTAGAAAATACTTTATTTATTAACACATCTAACCAT
GGGGTGTTCACTTACCAGGTAAGACCAGAACTTACGCTTCCTTTTCAGTACAGACATAAC
CAGCAAACCTGATAACCTTTAGGAGCTGCGGTGTGAACTCCAGGGGGAAATGGGAAATAC
AGGACATTAGGTTTAGGGCACTTACACTTCCTGGATCTCAGGGGTTTGCATTTCATTTAT
TGCTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTAGTACCAGGAAATGCACTG
AGGCCCTCGCATATTCTAGATGTACACTCTACCACTCCTGGCTACCTTGTCCACTCAGTG
ACTAGACTAATGTAGAGTGAAGGGCTTGGCTCTCCCAGGCACTAACACAGGCGGTCATAG
TCTATAGTATCTGACGGTTACTGTCAGGTTGTTAAGATGAGCTTCAATGACTGCTGTACT
CTAGTGTACTCTGTCCTTTCCCACAGCTGGTGCTCCTCCAAGTCTTTGTCCTAGATACAC
CTCATCTGTCTGCTACTCTTGGCCCTGCCCCTGCTCTTTCTCAGATGTCACCTCTGCTAC
CTCTCACTGTTCCCCAACTCCTTCTCCTTCTGTGACTTACTTTATAATCACAGCACATTT
TATAAGAGTCTCTGCCTTTACCACATCTGCCCAGTACTAGAGTAAGTGCCATGGGCTCAT
TATTTACTGTGTTCACTACGGTGCCTGTGCTGTGCCTGGCATAGCATAGACAATAATATT
TGTCATTTTCATAGTTGCCTTTCCCTTTTGGTCAGCCTAAGTGAAATGTTCCATGGGGGT
TAACCTGAGCCTGGGCTCCATAGCTGAGCATTGTCTGGGTCATGGCTCTATCCCTTACTA
GTGGGATAGGGAAATTTCAGCTCCCTGTGTGCATCTCTATGTGTAGTCCATGGTCTACTG
AAGGGCTGTGCTAAAAGTCATCCAGAAGTCATTCTGGATG..........

Sequence Detail Report

Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000185964
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 61 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information