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Target CDS Information

Gene Symbol (Gene ID) Stat1 (ENSMUSG00000026104)
Cross Reference
EMBL AC123752
GO GO:0000790, GO:0000978, GO:0000979, ...show all
goslim_goa GO:0000228, GO:0001071, GO:0002376, ...show all
MGI_trans_name Stat1-009
OTTP OTTMUSP00000066950
OTTT OTTMUST00000121564
RefSeq_mRNA NM_001205313.1
RefSeq_peptide NP_001192242
UCSC uc007ayc.2
UniParc UPI0000564534
Uniprot/SPTREMBL A0A087WSP5
Vega_transcript OTTMUST00000121564, Stat1-009
Vega_translation 179239, OTTMUSP00000066950
Definition protein_id:ENSMUSP00000141132
translation:
MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDL
LSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQ
RFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNR
EGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWK
RRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQV
LSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKV
KVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTN
EGPLIVTEELHSLSFETQLCQPGLVIDLEVFVPFQTTSLPVVVISNVSQLPSGWASILWY
NMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPD
GLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQ
QPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVM
AAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHP
SRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

Chromosome 1
Length
Position(start - end)
36,702
52,122,594 - 52,159,297
Orient to Chromosome plus
Link Location : (1:52122594-52159297)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Stat1 (ENSMUSG00000026104)
Transcript ID ENSMUST00000186057
Reports
substitution
cSNPs9
Insertion34
Deletion29
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num9
non-synonymous num0
synonymous substitutions 52123159 (p.His58His), 52123171 (p.Ser62Ser), 52137380 (p.Ser245Ser), 52144110 (p.Val374Val), 52147359 (p.Gly443Gly), 52152311 (p.Arg608Arg), 52153860 (p.Ala636Ala), 52153884 (p.Glu644Glu), 52156064 (p.Gly745Gly),
non-synonymous substitutions
B6 transcript
(ENSMUST00000186057)
MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDL
LSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQ
RFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNR
EGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWK
RRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQV
LSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKV
KVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTN
EGPLIVTEELHSLSFETQLCQPGLVIDLEVFVPFQTTSLPVVVISNVSQLPSGWASILWY
NMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPD
GLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQ
QPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVM
AAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHP
SRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV*
MSMv4 transcript
MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDL
LSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQ
RFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNR
EGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWK
RRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQV
LSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKV
KVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTN
EGPLIVTEELHSLSFETQLCQPGLVIDLEVFVPFQTTSLPVVVISNVSQLPSGWASILWY
NMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPD
GLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQ
QPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVM
AAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHP
SRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV*
homology100.00 (756 / 756)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Stat1 (ENSMUSG00000026104)
Transcript ID ENSMUST00000186057
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AGGACAGGTTAACTGTGACACTTGGAAGAAAGCAGTGGGTGTGTATACAT
CTAGGAGTGCTCCAGGACATGGAAGTTACAGGGACAGTCATCAAAGGCACAGCGGGAGAA
GGGTAGATAAGAGACTCACATTCTGGTTTAGTAGTTTAATAATGGAGATGGGGGACAGAG
GGATGTCCTGCGAGAAAGGAAGAAGCAAAGAGGACCTGTCCTCATGATGGCTAAGCAGGA
CAAAAGTTTCGGTAATGGAGGTGTCAATTGTGTAAAGCTTTATTTTTCTTAAACATATTA
GTTAGAATTATTCATTTTATTTCATGACATTTTTGTTTTGCTTGCGTATATGTGTACTTC
TTGCAGGCTTGGTTGACGTCAGTGGAGGTCCGAAGAGGGCACTAGACTCCTGGAACTGGA
GTTGGGAACCATTAAGCAGGCACTGCAAATCCAAGCCCTGTCCTCTGCAAGAGCAAGTTC
TCTGTAGCTGCTGAGTTAAAGCCAAGTATTGAATGTTTTTAAATTGGTAAATTAAGCTCC
CTGGCTTTAGTAACGTGAAGGTTAATCTTTAGTCCCCAATTCTGAATCCCGCACTGATGC
GCCTACTTAATGCAGGATCTCCAAGACTGAGCTTGCGCAAGCCTATAGTTTCCAACCTTG
TAAACACAACCTCCTGTCTGCGGTTTGCACCGCACAGCGGCGCCCCAAGTTTCGCACGCC
GGGTAGGGAGCGCGCGGACCAGGAAGGCCAAGCAGCCGAGGGGGGGGGGACGGTGCGCTG
ATGGAACAGCCGGCCAATCCCTGCCGCTGATTGGCCGAGGCGGAAGGAGGCGGGACGCCC
TCTAGCCTTTTTTCCTGCCCGGTACTTTCGGTTTTCAGCGCCGAGTCTGTCAAAGCTCCC
TGGAGACCTCCGGGACCGCGCCCCTCAGACCCACTTGGGACACTGCTGAGCGGCGCAGAG
AGATTTGCCCAGACTCGAGCTCCTGCGTGCAGTGAGTGAGTGAGAGCCAG
1 EXON 1 52,119,624 52,119,793 - - 170
GTGCGGATCCGGGTGCGGGTGCGGGTGGAAGTGGGGCGCCCTCTCCTCGGGCCTGGGGTC
TGCTGCCCACAGGTGACCTGTCATCCCGCAGAGAGAACGCCAGGAGCCGGATCGCATGCC
CAACTTTTGGCGCTGCTTGGCTCTCTTATCCTGCCGTTCTCACTTCTAGG
INTRON 1 - 2 52,119,794 52,119,911 118
GTAAAATGACTTGTGCAATAGACAT..........CTGTAACATTTTCTTCTTTTTGCAG
2 EXON 2 52,119,912 52,120,035 - - 124
TCGTTTCAGCTCTGCTCCATACCCTGAGCCGGCCCCACGCCGCCGCGCATGCAACTGGCA
TATAACTTGCTGTGTGTGGTGATTGCTTGTGTTGAATCCCGAACCTGCCCCCGGAGACAG
CCCA
INTRON 2 - 3 52,120,036 52,122,590 2,555
GTAAGTCTACGTGGGAACGGAAGCA..........GTTCACACGCGTGTTCTTTCTGCAG
3 EXON 3 52,122,591 52,122,721 - 2 131
AGGATGTCACAGTGGTTCGAGCTTCAGCAGCTGGACTCCAAGTTCCTGGAGCAGGTCCAC
CAGCTGTACGATGACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCCAGTGGCTGGAA
AAGCAAGACTG
INTRON 3 - 4 52,122,722 52,123,113 392
GTAAGGAAAACTCACTGGCTAGGGA..........CAAAGCTAAATTCCCGCTGTTGTAG
4 EXON 4 52,123,114 52,123,258 2 0 145
GGAGCACGCTGCCTATGATGTCTCGTTTGCGACCATCCGCTTCCACGACCTCCTCTCGCA
GCTGGACGACCAGTACAGCCGCTTTTCTCTGGAGAATAATTTCTTGTTGCAGCACAACAT
ACGGAAAAGCAAGCGTAATCTCCAG
INTRON 4 - 5 52,123,259 52,126,519 3,261
GTACGGACTGGCTTTGTGCCTCACT..........CACGGTATCGTCTCCAACAATCTAG
5 EXON 5 52,126,520 52,126,618 0 0 99
GATAACTTCCAAGAAGATCCCGTACAGATGTCCATGATCATCTACAACTGTCTGAAGGAA
GAAAGGAAGATTTTGGAAAATGCCCAAAGATTTAATCAG
INTRON 5 - 6 52,126,619 52,132,543 5,925
GTACTTGGTTCTCAGTGGACGCTAA..........GCTAACAGTGTGTTTCCCTTTAAAG
6 EXON 6 52,132,544 52,132,633 0 0 90
GCCCAGGAGGGAAATATTCAGAACACTGTGATGTTAGATAAACAGAAGGAGCTGGACAGT
AAAGTCAGAAATGTGAAGGATCAAGTCATG
INTRON 6 - 7 52,132,634 52,135,602 2,969
GTGAGTACAGACAGAATGCCTGCGT..........AACTCACTTATATCTTTATCTGCAG
7 EXON 7 52,135,603 52,135,681 0 1 79
TGCATAGAGCAGGAAATCAAGACCCTAGAAGAATTACAAGATGAATATGACTTTAAATGC
AAAACCTCTCAGAACAGAG
INTRON 7 - 8 52,135,682 52,136,878 1,197
GTAAGAGTCCCAACAGCACCCGTTG..........TTACTCCCTGTTCCTTCATTCACAG
8 EXON 8 52,136,879 52,136,970 1 0 92
AAGGTGAAGCCAATGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCTGCTGCTCCACA
AGATGTTTTTAATGCTTGACAATAAGAGAAAG
INTRON 8 - 9 52,136,971 52,137,278 308
GTAGCGACTGCTTCCCAGTCATGAG..........CACCTTGTTCTTCCTCGCCCTTTAG
9 EXON 9 52,137,279 52,137,430 0 2 152
GAGATAATTCACAAAATCAGAGAGTTGCTGAATTCCATCGAGCTCACTCAGAACACTCTG
ATTAATGACGAGCTCGTGGAGTGGAAGCGAAGGCAGCAGAGTGCCTGCATCGGGGGACCG
CCCAACGCCTGCCTGGATCAGCTGCAAAGCTG
INTRON 9 - 10 52,137,431 52,139,193 1,763
GTAAGGTTTTCCCCGGGGTGGAAGA..........GACCCCATGTCCTGTACCCTCCCAG
10 EXON 10 52,139,194 52,139,352 2 2 159
GTTCACCATTGTTGCAGAGACCCTGCAGCAGATCCGTCAGCAGCTTAAAAAGCTGGAGGA
GTTGGAACAGAAATTCACCTATGAGCCCGACCCTATTACAAAAAACAAGCAGGTGTTGTC
AGATCGAACCTTCCTCCTCTTCCAGCAGCTCATTCAGAG
INTRON 10 - 11 52,139,353 52,140,576 1,224
GTAAGGCCAGGCAGACCGACTATCC..........ATGTGTGTTTCCGGGTCACTGACAG
11 EXON 11 52,140,577 52,140,669 2 2 93
CTCCTTCGTGGTAGAACGACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCTGGTCTT
GAAGACTGGGGTACAGTTCACTGTCAAGCTGAG
INTRON 11 - 12 52,140,670 52,142,900 2,231
GTAACGAACATAGAGCTCCATATGC..........TAACAACTGTTATTTTTCTTTCAAG
12 EXON 12 52,142,901 52,142,960 2 2 60
ACTGTTGGTGAAATTGCAAGAGCTGAACTATAACTTGAAAGTGAAAGTCTCATTTGACAA
INTRON 12 - 13 52,142,961 52,144,085 1,125
GTAAGATTTCTGTAATCTTATCTAA..........TTAAAATTTACATATTTTTTTACAG
13 EXON 13 52,144,086 52,144,115 2 2 30
AGATGTGAACGAGAAAAACACAGTAAAAGG
INTRON 13 - 14 52,144,116 52,144,203 88
GTAGGTATAGCATCTGCACCCTACT..........AGGATTTGTGTCTTGCGTTGTATAG
14 EXON 14 52,144,204 52,144,297 2 0 94
ATTTCGGAAGTTCAACATCTTGGGTACGCACACAAAAGTGATGAACATGGAAGAATCCAC
CAACGGAAGTCTGGCAGCTGAGTTCCGACACCTG
INTRON 14 - 15 52,144,298 52,145,149 852
GTAGGCAGAGCAGTTTGATGTCTTG..........TGCCATTCGGTTTCTTCTTTTACAG
15 EXON 15 52,145,150 52,145,191 0 0 42
CAACTGAAGGAACAGAAAAACGCTGGGAACAGAACTAATGAG
INTRON 15 - 16 52,145,192 52,147,293 2,102
GTGAGCATCTCTGGGTGGCTAGCGG..........AGCTCTTTTCTTTTTGTTTTGGAAG
16 EXON 16 52,147,294 52,147,377 0 0 84
GGGCCTCTCATTGTCACCGAAGAACTTCACTCTCTTAGCTTTGAAACCCAGTTGTGCCAG
CCAGGTTTGGTGATTGACCTGGAG
INTRON 16 - 17 52,147,378 52,147,882 505
GTAAGAGTTACAGTTTCCTGAGGGA..........GAAGGGAGCTTGAAATGATTCCAAG
17 EXON 17 52,147,883 52,147,999 0 0 117
GTCTTTGTTCCCTTTCAGACCACCTCTCTTCCTGTCGTGGTGATCTCCAACGTCAGCCAG
CTCCCCAGTGGCTGGGCGTCTATCCTGTGGTACAACATGCTGGTGACAGAGCCCAGG
INTRON 17 - 18 52,148,000 52,148,902 903
GTATGGAAAACACATGTGCTTTAGT..........CAGCCTCTGGGTGTTTTCTCTGCAG
18 EXON 18 52,148,903 52,149,038 0 1 136
AATCTCTCCTTCTTCCTGAACCCCCCGTGCGCGTGGTGGTCCCAGCTCTCAGAGGTGTTG
AGTTGGCAGTTTTCATCAGTCACCAAGAGAGGTCTGAACGCAGACCAGCTGAGCATGCTG
GGAGAGAAGCTGCTGG
INTRON 18 - 19 52,149,039 52,150,618 1,580
GTATGGTTGGACACGCACCCACAAG..........TGTTCGTTTTTGTGTTTGTTTCTAG
19 EXON 19 52,150,619 52,150,668 1 0 50
GCCCTAATGCTGGCCCTGATGGTCTTATTCCATGGACAAGGTTTTGTAAG
INTRON 19 - 20 52,150,669 52,151,237 569
GTGGGTCCTCCCTGGGTTGTTTGCT..........CAATTGTGCATTTGTATACTTGCAG
20 EXON 20 52,151,238 52,151,332 0 2 95
GAAAATATTAATGATAAAAATTTCTCCTTCTGGCCTTGGATTGACACCATCCTAGAGCTC
ATTAAGAAGCACCTGCTGTGCCTCTGGAATGATGG
INTRON 20 - 21 52,151,333 52,152,232 900
GTAAGCGTCCCTGAGCGCTCCGAAG..........CTCCATTCATCTCTTTAATACCCAG
21 EXON 21 52,152,233 52,152,378 2 1 146
GTGCATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCC
AGGGACGTTCCTGCTTAGGTTCAGTGAGAGCTCCCGGGAAGGGGCCATCACATTCACATG
GGTGGAACGGTCCCAGAACGGAGGTG
INTRON 21 - 22 52,152,379 52,153,843 1,465
GTGAGTGAAGGGTCTCCCTCATGCC..........GACCTCACTGGTTTCCTCCTTGTAG
22 EXON 22 52,153,844 52,154,029 1 1 186
AACCTGACTTCCATGCTGTGGAGCCCTACACGAAAAAAGAGCTTTCAGCTGTTACTTTCC
CAGATATTATTCGCAACTACAAAGTCATGGCTGCCGAGAACATACCAGAGAATCCCCTGA
AGTATCTGTACCCCAATATTGACAAAGACCACGCCTTTGGGAAGTATTATTCCAGACCAA
AGGAAG
INTRON 22 - 23 52,154,030 52,154,985 956
GTGAGTGCCTGAGCGATCTGGGGTG..........GTGTACACGGTGTGCTTGCTCGTAG
23 EXON 23 52,154,986 52,155,061 1 2 76
CACCAGAACCGATGGAGCTTGACGACCCTAAGCGAACTGGATACATCAAGACTGAGTTGA
TTTCTGTGTCTGAAGT
INTRON 23 - 24 52,155,062 52,155,982 921
GTAAGTGAGCACAGAAGACTGGCTT..........CTGTCCTTTCCCCTCTCTGTTCCAG
24 EXON 24 52,155,983 52,156,082 2 0 100
CCACCCTTCTAGACTTCAGACCACAGACAACCTGCTTCCCATGTCTCCAGAGGAGTTTGA
TGAGATGTCCCGGATAGTGGGTCCCGAATTTGACAGTATG
INTRON 24 - 25 52,156,083 52,159,282 3,200
GTGAGTACTGTGGCAGGGGTATTTC..........CCTACCTACATTCTGTCTCTTGCAG
25 EXON 25 52,159,283 52,160,730 0 - 1,448
ATGAGCACAGTATAAACACGAATTTCTCTCTGGCGACATTTTTTTCCCATCTGTGATTCC
TTCCTGCTACTGTTCCTTCATATGCAGTATTTCTAGGGAAATGCAAGAAAGAAAGAGCAT
CACATTTGCTGAACGCTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
CTGAAGGACTTCATGCATCTTACTGAAGGTGAAATGGAAAGTCACTTAACACAAAATGGA
TTTTGTAAACAAAGACCAAGAGATCCACCCAAGCACCAGGACTAGAGTGCGAGTATTTGG
GGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTGTAATCAGTGCCCAAGTGCTGCA
CATCACTGGAAAGAGACATACTTACGGGGGAGGGGCCTTCTTGATGGAGGAATGTTTCTG
TCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCCACTGTTTTAC
ATATGGCACAGTTCAAAGTCAACTTTAGATCCAATGCTCTATCAAACTATAGTGGGCATC
CTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACTGCAGCTTCTGCCAAGGCATGG
TTGCTCTCCTCAGGGACTAGCTTTGTTGGTGGCAATGGCTACACAAAACTAAACACCAAC
AGAAGTAAGACCATTTTCATGAGTACTCCATCAAGTTAAAGGGTTTTTGTTGTCTTTTTG
GTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTTTCTTAAAGC
AATTTTTCTTTTTTTTTAACTAAAATTAGATATAGGTGAACTCATGTTTTTTAGTGGGCT
GACCTTATCGGTTTTAGCTGGTTGTCTTAATTAGCCATAAACTTGGAGAAAGCAGTGACT
TCTTGAATCCTTAGCCAAATATGAGTATCAGATAATTTTATTATTTTTTTTTCGAGACAG
GGTTTCTCTGTGTAGCCCTGGCTATTCTGGAACTCACTCTGTAGATCAGGCTGGCCTGGA
ACTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCAA
TGCCTGGTGAGATAACTTTAAAGAACTCCCTATAAATGCATGAGAACCACTGTTACTGAT
GAATGTGGTTTTTTGACAACTACATTCACAAATGGCCTGTCTTGTGTTTTGTCACCGTTT
TGAGGGATGATGTTTTGTGGCACGTGTGTGATCACAGCCTGATGGTTCTGGTCGTGGGTT
GGTTCTTCTGGGCCAGCTTTAACAGACTGCTGCGCAGCTGCACCCACAGTGCTGCCCCAT
AATACTGTTTCACTTTGGTGAAGATCAGCCCACCTTACACCCCGAGTGCAGGTGTGAACC
ACGGTAAGTGTGCACAGTCCTTAGGGAAAACAGGGACGCAGAGGCCTGCCTCCTCTCTTT
TCCATGCC
3' upstream sequence
AAAATGAAATGACCAAGAAACAAAACATTTAAAAAGTTGTTTCTAAATGCTGAGACCTAA
CCATTGCTTATATACTGTTGTCTGTTGAAACAGTTTGTTACAATTTCATTCTGTTGAACT
AGGTGAGACTTTAAGAAATGTTGAAATTATGTTAATTTCCTATTATTATTTAATATAAAG
ATATTTAAAATGTCTAGTGTTATGAGTTGGTTTAATATATATCTCATGTATGTATCAGTC
CTATTTTAAGCGCTTTTTAAAAAAGACTTGTTTAGGTATATATTTTATGTATATGGGTGT
TTTATCTGAATATATGGACACCAGAAGAGAGCACTGGGTCCCATGAGACTACAGTCAAAT
GGGATCACAGTCAGATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTTAGGG
CCTCTGGAAGAACAGCCAGTGCTTTTAACTGCTGAACCATCTCTTGGGACGCCTATGGGT
CCTATTTTAAAGGAAGACCGATATTTCCCAAGTGTCACCCTTGCTTACTCTACTGCAGTC
ACAGGAACTATGGCAGTTTAAGGTAGGTCAGCGGGCAGGCCCAGCAGTGAGGCCTCTCTG
AGGTAGAGGCATGGGGATCAGGCGTTTAGTCATTCAAGGCCGGCAGGGCTCCATGGGATC
ACATCCAAGTCAGGGCAAGACATCCACTTACACTTTCAGGTAGCTGCCTGTTAGACGTCA
CCAAGCATGTCCTAGCTTAAGTATGACGAGGATGGCGTTTTCTAAGTACAGAGCATATAT
GTAGCACTTGGGATAAGCTGATCTAGGGACTTCCTGAGGCGGCAGAGCTTAAAGTGGACT
CCATTGACTGCTTGGAGACTACTGTGCAATGAAGGCATGTCTCAGTAAACAGAACAGACC
TGTGGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAAGGATTTAGAAAATTC
TTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCC..........

Sequence Detail Report

Gene Symbol (Gene ID) Stat1 (ENSMUSG00000026104)
Transcript ID ENSMUST00000186057
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 756 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information