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Target CDS Information

Gene Symbol (Gene ID) Cspp1 (ENSMUSG00000056763)
Cross Reference
GO GO:0000922, GO:0005515, GO:0005654, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name Cspp1-017
OTTP OTTMUSP00000066332
OTTT OTTMUST00000118990
RefSeq_peptide_predicted XP_006495544.2, XP_011236667.1
UCSC uc011wih.1
UniParc UPI0001E88EB2
Uniprot/SWISSPROT B2RX88
Vega_transcript Cspp1-017, OTTMUST00000118990
Vega_translation 178700, OTTMUSP00000066332
Definition protein_id:ENSMUSP00000139775
translation:
MDLNCYPHLVAGHAHSYLIWRGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYG
LSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDE
RLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQ
TAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPER
RARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVD
GDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQE
LLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQ
TPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPA
SNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNE
QKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEA
EMRIYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFL
RFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEE
LIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIAS
KLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEE
RRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFN
ELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICT
DNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNK
LKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLVD
PDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAA
HA

Chromosome 1
Length
Position(start - end)
89,651
10,046,493 - 10,136,145
Orient to Chromosome plus
Link Location : (1:10046493-10136145)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Cspp1 (ENSMUSG00000056763)
Transcript ID ENSMUST00000186294
Reports
substitution
cSNPs11
Insertion62
Deletion79
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num8
non-synonymous num3
synonymous substitutions 10047432 (p.Ala24Ala), 10066713 (p.Gln254Gln), 10088135 (p.Ala490Ala), 10090218 (p.Val543Val), 10095955 (p.Asn606Asn), 10112899 (p.Leu721Leu), 10112932 (p.Ala732Ala), 10127472 (p.Arg922Arg),
non-synonymous substitutions 10066691 (p.Gly247Glu), 10134095 (p.Ser1028Gly), 10135951 (p.Val1079Ile),
B6 transcript
(ENSMUST00000186294)
MDLNCYPHLVAGHAHSYLIWRGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYG
LSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDE
RLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQ
TAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPER
RARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVD
GDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQE
LLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQ
TPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPA
SNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNE
QKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEA
EMRIYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFL
RFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEE
LIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIAS
KLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEE
RRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFN
ELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICT
DNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNK
LKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLVD
PDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAA
HA*
MSMv4 transcript
MDLNCYPHLVAGHAHSYLIWRGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYG
LSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDE
RLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQ
TAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPER
RARRANEERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVD
GDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQE
LLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQ
TPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPA
SNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNE
QKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEA
EMRIYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFL
RFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEE
LIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIAS
KLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEE
RRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFN
ELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICT
DNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNK
LKGLDFDGSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLID
PDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAA
HA*
homology99.74 (1143 / 1143)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Cspp1 (ENSMUSG00000056763)
Transcript ID ENSMUST00000186294
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CACCATTGTTCTGCTTCTAGGTATCAGGTGAGAGGTTTTGAGTGTACTTT
TTGGTGGGATTTTTTGATCTCCCAATATTCTGTTTTGTGAGTGTTCTAATAATTGATTAA
CAAGCTGAATAGAAGACAGAGGTTAAGCCTCAAGATTTTTAATGAGAAAAATAGTATTAA
ATGAATAATAAATGTTTTGAAATGCATATTAGTAAATTTACAAGGGTAATTTATTCTGTA
CTATTTGCTTTTTAGAACAAGATGTTATAGTTGTTTCTGAAAAGCAATGTCTGGAAAGTT
TTCTTAAGCTGTTTTTATTTTGACATAAGAGTTGTTGTATTTAGCAGATACTGAGATTGC
GCTAGGAGCCATGCTGGGCTCTGGGAACACTGCACTGATGCAGACAGATGCCGTCTCTCA
CGGGCTCAGAACGTGTTAACAAGTTGGCCTGTGCCATGGGTTCTATGTCATGAGCTTATC
TGTATCAAATGGCTTGCTGTAAGACACTTCTGACTTACCTGTTTCCCACTGTCTCATTTG
GTTTAGCATCTGTCCCACACAGATAACCAAATTAAGATGATACTCACGACATAATAACTA
TACATTTTATTATATAAGTTTACACGATAGTACTCATATGGGTAGGGTACAGCTTTAAAA
GTTTACATTTCAGTGCAGCATTTGAAGTAAGTGTCTCTTATTATAATTTCCATGCACATA
AACTAAGGCGTTGGGAAGCTGAGTAATGAGACTGAGATGCCGAGTTGGTAGAAGAGGCTT
GGTTCCTGACATTGACTAAGTGCATGTCCTTTTAAGCACTGGCCATGGTTGTCTTCCTTC
GAAACAGTCTACTTTGTAAAAGGAGTTAAAGCAAGGGCTTTGTGTGTACCATTGTCTCTA
GTCAGGACATCTTTATGATGTAGGGCTATTTTGTTTTTTGTTTGTTTTGTTCTGGAGATC
AAGAAAATGAGACCAGAGGCATTAAATGATTCATTCAAGTAGACAAAGGG
1 EXON 1 10,046,493 10,046,555 - 0 63
ATGGATTTAAATTGCTATCCTCATCTAGTGGCAGGGCATGCTCACAGTTACTTGATATGG
AGG
INTRON 1 - 2 10,046,556 10,047,423 868
GTGAGTGTGCATGTTTAAGCATATT..........TGATTTGTAAATATGTCTTTTCCAG
2 EXON 2 10,047,424 10,047,526 0 1 103
GGAAAGGCATCAGAGAAACTCTCTGAAAACAGTAAAATATTAATCTCTATGGCTAAGGAG
AACATTCCACCAAGCAGCCAACAACAGCCCAAGGGACCCTTAG
INTRON 2 - 3 10,047,527 10,058,719 11,193
GTATGGTACTGTATGTGTGGAGCTA..........CGACTTAAGCTGTTTTCTTTTTTAG
3 EXON 3 10,058,720 10,058,823 1 0 104
GAATTGAATATGGCTTAAGTTTACCGCTTGGAGAAGATTATGAACAGAAGAAACATAAAT
TAAAAGAAGAATTGAGGCAAGATTATAGACGATATCTTACTCAG
INTRON 3 - 4 10,058,824 10,059,823 1,000
GTAAGTTGTTCTGTTAGTGAGTTGT..........AATGGTTTGTTTCTCTCCACTTTAG
4 EXON 4 10,059,824 10,059,847 0 0 24
GGCATTACACAAGCAAAGAGAAAG
INTRON 4 - 5 10,059,848 10,064,332 4,485
GTAGGGTTGCCTGCGTAATGTTCTC..........TATATTTTAATGTGCATATATACAG
5 EXON 5 10,064,333 10,064,413 0 0 81
AAAAATTTCCTATCTACTGGTGAAACAGACCCATCTACTCTGGGAGTTTCTCTTCCCATT
GATGAGCGGTTATCTGCCAAG
INTRON 5 - 6 10,064,414 10,065,322 909
GTAGGTGGATAGGAATAAGAGTTTC..........ATTGTTTTTCAATTTTTTTGTAAAG
6 EXON 6 10,065,323 10,065,421 0 0 99
GAAAGATTGAAACTTGAACGCAACCGAGAATACAATCAGTTTCTCAGGGGTAAGGCAGAA
TCCACAGAAAAAGTCAGACAGGTAGAAAAGAATATTGAG
INTRON 6 - 7 10,065,422 10,066,425 1,004
GTATGTTTTACTTTTATAAAGTGAT..........CTTTTTTTCTTTTTTAATTCAACAG
7 EXON 7 10,066,426 10,066,820 0 2 395
CCTAAGAGTCAAAGAAATAAAAACCCTATTAGTCAAGGTAAATCTGATCTACCTTTACAA
ATACAGACTGCATACACACATTCAGAGGGACCCTGGCTAAGCCGGCAAGAGGAGGGCCTG
TACCGACAGCTAGATGGTGAAATTGAATTAAGGAGCAGAAGACCGCTTAAACAAACAAAG
GAAGAAGTAGGCATTTCTGGTGCAGAACATCCAAGCCTTTCTGGCAGCGCTGGTGTCCCA
GAGAGAAGAGCCCGCAGGGCTAACGAGGAGCGGGTGCTTGACAGACAGCATTGCAGAGCC
GACCGAGACCCTGGTGTGAGTGAAGACATGGACGAGAGGTTTAGATTTGAAAGTGATTTT
GATAGAAGACTTTTGAGAGTGTATACAAATGGCAG
INTRON 7 - 8 10,066,821 10,074,859 8,039
GTATTTACATCTTCACTTTTCTTCT..........CTTTATAAGCTAATGTGTTTTGAAG
8 EXON 8 10,074,860 10,074,946 2 2 87
GCCGCATGGGAGCAGACGAGGGTATGTGGATGGGGATGATGTCCCAGAAGAGCCAAACAC
ACAGATCTCAGCTGCTGAAAATAAAAG
INTRON 8 - 9 10,074,947 10,077,171 2,225
GTACGTGACAGCAATGATCTCCTTG..........TGCTCTCTCATATTGTTTGTTTTAG
9 EXON 9 10,077,172 10,077,242 2 1 71
TGTTCACTGTAATGGACCACCCAGATCTGCTGATCTCGATATCACAAGTCCATTTGCAGG
CATGCTCTTTG
INTRON 9 - 10 10,077,243 10,082,252 5,010
GTATGTCCAGCACTTTCAGCTGATT..........GTTTATTTCTTTATTTTTTATCCAG
10 EXON 10 10,082,253 10,082,346 1 2 94
GAGGTGAAGATCGAGAACTTACCAAGAGAAGGAAGGAGAAATATAGGCAAGAACTACTAG
AACAGATAGCTGAGCAACAGAAGAAGAAGAGACG
INTRON 10 - 11 10,082,347 10,083,500 1,154
GTAATGAAAAGCTTGCATTTAGCAG..........TTTACAAAATCTTAATTTTGTTTAG
11 EXON 11 10,083,501 10,083,558 2 0 58
AGAAAAAGATTTAGCATTTGGAATTACAACTTCTGGAGTACAAGACCCTGAAAAATCG
INTRON 11 - 12 10,083,559 10,085,746 2,188
GTAAGAGTTCTTGGCATCTTTTAGT..........TTTTTTGTCTTTTTCTTTATTGTAG
12 EXON 12 10,085,747 10,085,952 0 2 206
CCTGATAGACTAAAGCAGTTTAGTTTGACACCAAGACACTTTGAAGAGATGCCACCTGAG
AGGCCCAGAGTAGCTTTCCAGACACCTCCCCCTCCCTTCTCTGCCCCGTCTAGCCCATCC
GTCCCACCAGTTCATTCCGCCCCTTCTCACAATGAAGACTTGCACAGTGGACTCGGCAGC
ACCCTTGGTGAACTGGCGCATCCCAG
INTRON 12 - 13 10,085,953 10,088,050 2,098
GTGCTTGTTTAAATGTTTGTCTTTG..........TGTTTTTGGTTTTCTTTTGCTATAG
13 EXON 13 10,088,051 10,088,184 2 1 134
GGTTCTGCCTGTGCCTCTGAATCCACCCCCGCCTCCGCTCCTTGCCCCTCCAGCTTCTAA
CTATCGAACTCCTTACGATGATGCCTACTATTTTTACGGTGCCAGAAATACACTGGATCC
CAATATTGTATACT
INTRON 13 - 14 10,088,185 10,088,881 697
GTGAGTTTTCTATATGTTCTATAAA..........TGTCCTTTTTTCTGTTTCCCTTTAG
14 EXON 14 10,088,882 10,088,960 1 2 79
ATGGTTCAGGAATGATTGGAGGACAGCCTGCCCCTCATGTCTCTGCCCCTGTCACTCACC
AGGTAGCACCGCCAGCTGT
INTRON 14 - 15 10,088,961 10,090,187 1,227
GTAAGTCTTAAAATAAAATAAAGTT..........ATTGAAATTGTTTATTTGCTCTTAG
15 EXON 15 10,090,188 10,090,317 2 0 130
GAATACTGTTGGACAGAATGAACAGAAAGTCCTTAGTGATGGACTCAGGAATTCAGGACT
GGTCTTTGAGGATAAGCCAAAACCTTCTACACAGTCGCTTCAGTCTTACCAAGAAGCTTT
GCAGGAGCAG
INTRON 15 - 16 10,090,318 10,095,865 5,548
GTATTCATTCATTCATTTATTCATT..........ATTAAGCATATCTTATGTTGTCAAG
16 EXON 16 10,095,866 10,096,013 0 1 148
ATTCGGGAAAGAGAAGCAAGAAGGAAGAAAGAACGTTTAGAAAAAGAAGAATATGAAGCT
AAATTAGAAGCCGAAATGAGGATCTACAATCCCTGGGGGAAGGGCGGAGGTGGTGCTCCT
CTCAGAGACGCCAAAGGAAATCTGATAA
INTRON 16 - 17 10,096,014 10,108,368 12,355
GTATGATGTGTTCATAAACTTGCTT..........TGTTTTTGCAAATTGTCTTTTGAAG
17 EXON 17 10,108,369 10,108,481 1 0 113
GTCCTTTGCAAACACAAAGCTCTCCTTTTGCCCGGGGAAACACATTTGGTGAGCCACTCA
GCGAGCTTCAGATTAAACAGCAAGAATTATACAAGAATTTTCTTCGTTTTCAG
INTRON 17 - 18 10,108,482 10,112,392 3,911
GTGAAAGCCTTGTTTGGTTATAGTT..........ATAATCACTAAGTCCAATTCTTTAG
18 EXON 18 10,112,393 10,112,542 0 0 150
ATTGAGGAAAAGAGACAAAGAGAAGAAGCCGAGCGCGAGAAGCTGAGAGTTGCTGAAGAG
AAGGAAGAAAAGCGGCTTGCGGAGCAGAGGGCAAGGATTCAGCAAGAGTATGAGGAGGAG
CAGGAGCGGAGGAGGGAGAAGGAGGAGGAG
INTRON 18 - 19 10,112,543 10,112,875 333
GTGTGTCTGTTTCTCCAGCCAAAGT..........CGTGTGTCTTTTTTAAATTTTAAAG
19 EXON 19 10,112,876 10,113,022 0 0 147
CAAAGGTTGAAAAATGAAGAACTGATTCGGTTAGCTGAAGAGAGGCGAAAGGAAGCAGAA
AGAAAGAAGAAAGAGGAGGAAGAAAAACATAACTTGCAACTTCAGCATTACTATGAGAGA
GAAAATATTATCGGAGATGAAACAAAG
INTRON 19 - 20 10,113,023 10,113,602 580
GTATGTCTTGGACAGAGGCATGTCG..........TGTACAGAAATCATTTTTTTTTCAG
20 EXON 20 10,113,603 10,113,707 0 0 105
CACTTGAGACAGCCTTCTCCTGTAGTTCCTGCTCTTCAGAACAAAATTGCAAGCAAACTC
CAAAGACCTCCTTCAGTCGACACCATCATAAGTTCCTTCATTCAC
INTRON 20 - 21 10,113,708 10,116,017 2,310
GTACATACTTTTTTCTCAGGGTTAA..........ACTGTGCCTGTCCTGTTGGCCACAG
21 EXON 21 10,116,018 10,116,084 0 1 67
GAAAGCTCCATGTCCCGGGCACAGTCTCCTCCAGTGCCTGCAAGGAAGAACCAACTCCGT
GCAGAAG
INTRON 21 - 22 10,116,085 10,116,613 529
GTGGGTTGGACGTCTATAAATGAGA..........CTCTCTTCTCTATGGGAATTTGCAG
22 EXON 22 10,116,614 10,116,731 1 2 118
AGGAGAAAAAAAATGTGATTATGGAGTTATCAGAAATGAGGAAGCAGCTCCGGAGCGAGG
AGAGGCGTTTGCAGGGGCGGCTGCTGCACCTGGACAGTGACGACGAGATCCCCATGAG
INTRON 22 - 23 10,116,732 10,126,339 9,608
GTGCTTCTGCGCATCTTCCTGGAGT..........ATTGATCATGATTTGCTATTTTTAG
23 EXON 23 10,126,340 10,126,479 2 1 140
GAAAAGAGAGAGGAACCCAATGGATATATTTGACATGGCTAGACATCGGGTACAAGCCCC
TGTCAGAAGACCATCGCCTAAGGGCTTAGATGCTACTACTTTTCAGAATATTCATGACTT
TAATGAGCTGAGAGAGAGAG
INTRON 23 - 24 10,126,480 10,127,422 943
GTGAGCATAAAGTTATAATTGTTCT..........CTTAGTTATGTAACTTTTGTGACAG
24 EXON 24 10,127,423 10,127,563 1 1 141
ATTCAGATACTCGAGTGGATCTGAGATTAATGTACCCAGATCCTCCCCGAGATCATCACA
CCTTGGAGATTCAGCAGCAGGCCCTACTCCGAGAGCAGCAGAAGAGGCTTAATAGAATAA
AGATGCGGAGAGATGCAGGAG
INTRON 24 - 25 10,127,564 10,129,985 2,422
GTAAGTGCAAGCCTGGCTGCTTTAC..........CATTATTCTTTTGTTCTGTTTACAG
25 EXON 25 10,129,986 10,130,032 1 0 47
CTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATG
INTRON 25 - 26 10,130,033 10,132,453 2,421
GTAAGCAACCAGTTCAAATTCCTCA..........ACAATTGTTGTTTTTTTTATTTTAG
26 EXON 26 10,132,454 10,132,517 0 1 64
CCCAGAGATGACACTAATGATTTTTTGAAAAATTCATTACTAGAATCTGATAGTGCTTTT
ATTG
INTRON 26 - 27 10,132,518 10,133,163 646
GTGAGTATATCTAATGTGATATTAA..........CATATTCTTTGTGTGGCCTGTTTAG
27 EXON 27 10,133,164 10,133,273 1 0 110
GTGCTTATGGTGAGACATATCCTGTTATTGAAGACAATGCCTTCCCTCCACCATCACAGC
TGCCCTCTGCAAGGGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTT
INTRON 27 - 28 10,133,274 10,134,091 818
GTATGTATGATCTTCTCAGTTTAGA..........CCTAAATTCTCTCTCTTAACTTTAG
28 EXON 28 10,134,092 10,134,230 0 1 139
GACGGTAGTCGGCTGCACACCCCACAAGATGGTCTCTCTTTAAAATCTATCTCCAGTGTA
AATGTCGATCAAGTTAGAATGAGAAATGAAGACAGAATGAGAAGACTGACTGAGCAGCAG
AAGAAACCCACTAACACAG
INTRON 28 - 29 10,134,231 10,135,933 1,703
GTACTTCCATACAAGATATCCACTG..........GACTTGTATCTTTTGCCTTCTGTAG
29 EXON 29 10,135,934 10,136,145 1 - 212
ATGATGAGGGTTCACTGATTGATCCTGATGACATCATGAGACACCTGAGTGATGATGGAC
GCAACTCTGCGGCAACTGAGCCCTGGCTCCGCCCTGGCACTTCAGAAAGTCTGAAACGGT
TCATGGCAGAGCATCTGAATGAAGAACAGCATAAGGGGCCTGGGAAGCCAGGCACGTTTA
CTTGGCAGGGCCTCTCTGCTGCACATGCTTAA
3' upstream sequence
AATAAACCCTCTCGGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATCTTGAA
TACTATGTCTTGCTTGTGGCCCTACTTTAATATTAGTTATTTATGTAAAGTGTATTTTTC
CCATGATGATACGTTATGTATATATAATGTACATAAAAGCCCTGATTATTGGTTTCTAAT
TGTATAGAATTATTTTTGCAATTTTGCTATGGGTGGTAATGAACTCTTGATTGAGCTACC
GTATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACAGCACT
GTGAAACAATACACTGTTACTAGCCTACTTGCCACTGTTAGCATTGTGGAGAAACAATTC
AGAGAGACTTGTTTTATATACCTGCTGTTGCTGTGACTATGCCAGCTGCTAGGCAATGAA
AGATTCAAACAAGCTGCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGG
ATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCTCCATCTTATTTT
TATGCTGATAGAAGCACAGACTGGGTTATTAATTTATCTGATTTCACTATTTCTTAACAC
AAATAAAGTTCTATTTTTATTAACTACCAGTGTCGGTTTCTTTCTTTACTCAAAGTGTTT
CTAGGGGTTAAAAAGGTCCCATCCAGAGAGGATAGAGGCAGTGGTCTTCTGTCCCACCAC
CTGAGACCCTTGGCTACGTGAACTGATAAGTAAATGATATTTTACTTCATAAAGACTCAT
TCAACTTTTAGAAATTCTAGAAAATAATTCTTACTTGGATTAGGGTCTTCAATGTGTACC
ATGATGGCAGTTGAAGACAGGCAGCCACTGCTTCTCTGTAATTTCCAGGGATAACATCAA
CATCCGATTTTGACATTAGAGTTTACCAAAAATAAGACATTTTTGGTATTCTTTCTTGTT
TTTTTTTTTCCTTTGGCTACATCTAATTTTTATGTTCAAT..........

Sequence Detail Report

Gene Symbol (Gene ID) Cspp1 (ENSMUSG00000056763)
Transcript ID ENSMUST00000186294
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1143 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information