MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Adhfe1 (ENSMUSG00000025911)

Cross Reference

EMBL	AC103620
GO	GO:0015993, GO:0047988, GO:0055114
goslim_goa	GO:0003674, GO:0006810, GO:0008150, ...show all
MGI_trans_name	Adhfe1-005
OTTP	OTTMUSP00000066276
OTTT	OTTMUST00000118822
UniParc	UPI0004621112
Uniprot/SPTREMBL	A0A087WS19
Vega_transcript	Adhfe1-005, OTTMUST00000118822
Vega_translation	178664, OTTMUSP00000066276

Definition

protein_id:ENSMUSP00000140861
translation:

TRSSHTLAEAPTKHSMPVPNSFSYLLPRIYRIWELRMFA

Chromosome

Length
Position(start - end)

5,246
9,548,107 - 9,553,354

Orient to Chromosome

plus

Link

Location : (1:9548107-9553354)
/

Detail Map

name	Rrs1 (ENSMUSG00000061024)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Rrs1 note : RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1929721]

name	Adhfe1 (ENSMUSG00000025911)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Adhfe1 note : alcohol dehydrogenase, iron containing, 1 [Source:MGI Symbol;Acc:MGI:1923437]

name	Rrs1 (ENSMUSG00000061024)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000072079

name	Adhfe1 (ENSMUSG00000025911)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000144177

name	Adhfe1 (ENSMUSG00000025911)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000027044

name	Adhfe1 (ENSMUSG00000025911)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000130927

name	Adhfe1 (ENSMUSG00000025911)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186467

name	Adhfe1 (ENSMUSG00000025911)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000190654

name	Rrs1 (ENSMUSG00000061024) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14811.1 Uniprot/SWISSPROT:Q9CYH6 RefSeq_peptide:NP_067486 RefSeq_mRNA:NM_021511.2 Vega_transcript:OTTMUST00000118821 Vega_transcript:Rrs1-001 UCSC:uc007agk.2 Fantom:2310075G19 Fantom:2810404J02 Fantom:5330427D04 Fantom:5730466A07 Fantom:D230011A03 EMBL:AB041589 EMBL:AK010178 EMBL:AK017683 EMBL:AK019257 EMBL:AK019913 EMBL:AK142041 EMBL:BC003481 EMBL:BC055925 GO:GO:0000794 GO:GO:0000794 GO:GO:0002244 GO:GO:0005515 GO:GO:0005515 GO:GO:0005634 GO:GO:0005730 GO:GO:0005730 GO:GO:0005783 GO:GO:0007080 GO:GO:0007080 GO:GO:0042254 GO:GO:0044822 GO:GO:0044822 MGI_trans_name:Rrs1-001 Vega_translation:178660 Vega_translation:OTTMUSP00000066275 goslim_goa:GO:0000228 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0007049 goslim_goa:GO:0007059 goslim_goa:GO:0007067 goslim_goa:GO:0008150 goslim_goa:GO:0030154 goslim_goa:GO:0042254 goslim_goa:GO:0043226 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH03481.1 protein_id:AAH55925.1 protein_id:BAA95072.1 protein_id:BAB26750.1 protein_id:BAB30871.1 protein_id:BAB31631.1 protein_id:BAB31912.1 protein_id:BAE24922.1 OTTP:OTTMUSP00000066275 OTTT:OTTMUST00000118821 UniParc:UPI00000257A2
definition	note : transcript_id=ENSMUST00000072079 protein_id : ENSMUSP00000071955 translation : MEGQRVEELLAKAEQEEAEKLQRITVHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQLLINQLWRLPTERVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRRRWGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKMQMPSSAGLHPTGHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAEKKNQLELLRVMNSKKPRLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPSGKRKGGPPGQGEKRKGGLGSKKHSWPSALAGKKKGVPPQGGKRRK

name	Adhfe1 (ENSMUSG00000025911) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14812.1 Uniprot/SWISSPROT:Q8R0N6 RefSeq_peptide:NP_780445 RefSeq_mRNA:NM_175236.4 RefSeq_peptide_predicted:XP_006495648.1 RefSeq_peptide_predicted:XP_006495649.1 Vega_transcript:Adhfe1-001 Vega_transcript:OTTMUST00000053148 UCSC:uc007agl.2 Fantom:A230068K11 Fantom:C730025H21 EMBL:AK038853 EMBL:AK050178 EMBL:BC026584 GO:GO:0005739 GO:GO:0015993 GO:GO:0015993 GO:GO:0046872 GO:GO:0047988 GO:GO:0047988 GO:GO:0055114 MGI_trans_name:Adhfe1-001 Vega_translation:178661 Vega_translation:OTTMUSP00000025254 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH26584.2 protein_id:BAC30151.1 protein_id:BAC34108.1 OTTP:OTTMUSP00000025254 OTTT:OTTMUST00000053148 Reactome:R-MMU-1428517 Reactome:R-MMU-1430728 Reactome:R-MMU-71406 Reactome:R-MMU-880009 UniParc:UPI00000EA509
definition	note : transcript_id=ENSMUST00000144177 protein_id : ENSMUSP00000116627 translation : MAAAARARVTHLLRHLQSTACQCPTHSHTYSQAPGPSGKTADYAFEMAVSNIRYGAGVTKEVGMDLQNMGAKNVCLMTDKNLSQLPPVQIVMDSLSKNGISFQVYDDVRVEPTDGSFMDAIEFAKKGAFDAYVAVGGGSTMDTCKAANLYASSPHSEFLDYVNAPIGKGKPVTVPLKPLIAVPTTSGTGSETTGVAIFDYEHLKVKTGIASRAIKPTLGLVDPLHTLHMPCQVVANSGFDVLCHALESYTAIPYSMRSPCPSNPIQRPAYQGSNPISDIWAVHALQIVAKYLKRAVRNPDDLEARSKMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKTYKAKEYNVDHPLVPHGLSVVLTSPAVFTFTAQMFPERHLETAGILGANIRTARIQDAGLVLADALRKFLFDLNVDDGLAALGYSKDDIPSLVKGTLPQERVTKLAPRAQSEEDLSALFEASMKLY

name	Adhfe1 (ENSMUSG00000025911) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Adhfe1-002 Vega_transcript:OTTMUST00000053149 Uniprot/SPTREMBL:M0QWD9 EMBL:AC103620 GO:GO:0015993 GO:GO:0047988 GO:GO:0055114 MGI_trans_name:Adhfe1-002 Vega_translation:178662 Vega_translation:OTTMUSP00000062958 goslim_goa:GO:0003674 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 OTTP:OTTMUSP00000062958 OTTT:OTTMUST00000053149 UniParc:UPI0002A477C3
definition	note : transcript_id=ENSMUST00000027044 protein_id : ENSMUSP00000137782 translation : MAAAARARVTHLLRHLQSTACQCPTHSHTYSQDGCLKY

name	Adhfe1 (ENSMUSG00000025911) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Adhfe1-003 Vega_transcript:OTTMUST00000053150 Uniprot/SPTREMBL:M0QWG3 EMBL:AC103620 GO:GO:0015993 GO:GO:0047988 GO:GO:0055114 MGI_trans_name:Adhfe1-003 Vega_translation:178663 Vega_translation:OTTMUSP00000062959 goslim_goa:GO:0003674 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 OTTP:OTTMUSP00000062959 OTTT:OTTMUST00000053150 UniParc:UPI0002A47805
definition	note : transcript_id=ENSMUST00000130927 protein_id : ENSMUSP00000137817 translation : MAAAARARVTHLLRHLQSTACQCPTHSHTYSQDSEVHKVQCSVSTVSGCHVVDTKTALLERDGCLKY

name	Adhfe1 (ENSMUSG00000025911) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Adhfe1-005 Vega_transcript:OTTMUST00000118822 Uniprot/SPTREMBL:A0A087WS19 EMBL:AC103620 GO:GO:0015993 GO:GO:0047988 GO:GO:0055114 MGI_trans_name:Adhfe1-005 Vega_translation:178664 Vega_translation:OTTMUSP00000066276 goslim_goa:GO:0003674 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 OTTP:OTTMUSP00000066276 OTTT:OTTMUST00000118822 UniParc:UPI0004621112
definition	note : transcript_id=ENSMUST00000186467 protein_id : ENSMUSP00000140861 translation : TRSSHTLAEAPTKHSMPVPNSFSYLLPRIYRIWELRMFA

name	Adhfe1 (ENSMUSG00000025911) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006495648.1 RefSeq_peptide_predicted:XP_006495649.1 Vega_transcript:Adhfe1-004 Vega_transcript:OTTMUST00000118823 Uniprot/SPTREMBL:A0A087WRE7 UCSC:uc007agl.2 GO:GO:0015993 GO:GO:0046872 GO:GO:0047988 GO:GO:0055114 MGI_trans_name:Adhfe1-004 Vega_translation:178665 Vega_translation:OTTMUSP00000066277 goslim_goa:GO:0003674 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0043167 OTTP:OTTMUSP00000066277 OTTT:OTTMUST00000118823 UniParc:UPI0004621004
definition	codon_start : 2 note : transcript_id=ENSMUST00000190654 protein_id : ENSMUSP00000140592 translation : XTHLLRHLQSTACQCPTHSHTYSQAPGPSGKTADYAFEMAVSNIRYGAGVTKEVGMDLQNMGAKNVCLMTDKNLSQLPPVQIVMDSLSKNGISFQVYDDVRVEPTDGSFMDAIEFAKKGAFDAYVAVGGGSTMDTCKAANLYASSPHSEFLDYVNAPIGKGKPVTVPLKPLIAVPTTSGTGSETTGVAIFDYEHLKVKTGIASRAIKPTLGLVDPLHTLHMPCQVVANSGFDVLCHALESYTAIPYSMRSPCPSNPIQRPAYQGSNPISDIWAVHALQIVAKYLKRAVRNPDDLEARSKMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKTYKAKEYNVDHPLVPHGLSVVLTSPAVFTFTAQMFPERHLETAGILGANIRTARIQDAGLVLADALRKFLFDLNVDDGLAALGYSKDDIPSLVKGTLPQERVTKLAPRAQSEEDLSALFEASMKLY

name
type	misc_feature
link
xref
definition	note : contig AC103620.12 34343..171728(1)

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Adhfe1 (ENSMUSG00000025911)
Transcript ID	ENSMUST00000186467

Reports
substitution
cSNPs	2
Insertion	6
Deletion	10
SNPs	-1kb 9543914(c.-4193A>G), 9544044(c.-4063T>C), 9544387(c.-3720G>A), 9544479(c.-3628A>G), 9544630(c.-3477C>A), 9544931(c.-3176G>A), 9544933(c.-3174C>A), 9544961(c.-3146A>C), 9545985(c.-2122A>G), 9546065(c.-2042G>T), 9546067(c.-2040G>C), 9546103(c.-2004G>C), 9546153(c.-1954T>G), 9546171(c.-1936A>G), 9546180(c.-1927C>T), 9546211(c.-1896G>A), 9546215(c.-1892C>A), 9546224(c.-1883G>A), 9546313(c.-1794G>A), 9546373(c.-1734G>A), 9546400(c.-1707A>C), 9546414(c.-1693G>A), 9546453(c.-1654C>T), 9546483(c.-1624G>T), 9546503(c.-1604C>T), 9546550(c.-1557C>A), 9546556(c.-1551T>A), 9546572(c.-1535C>G), 9546593(c.-1514C>A), 9546704(c.-1403G>A), 9546722(c.-1385A>G), 9546760(c.-1347G>A), 9546876(c.-1231C>T), 9547041(c.-1066C>T), 9547196(c.-911G>A), 5'UTR CDS 9549934(c.73T>C), 9553351(c.117T>C), 3'UTR 9553415(c.61A>C), INTRON 9548282(c.45+131A>T), 9548285(c.45+134A>T), 9548607(c.45+456C>G), 9548634(c.45+483G>C), 9548635(c.45+484T>C), 9548665(c.45+514G>T), 9549236(c.46-671C>G), 9549275(c.46-632T>G), 9549419(c.46-488T>C), 9549477(c.46-430G>A), 9549541(c.46-366A>T), 9549547(c.46-360G>T), 9549556(c.46-351A>G), 9549664(c.46-243A>T), 9549819(c.46-88T>C), 9549883(c.46-24T>C), 9550124(c.83+180T>C), 9550134(c.83+190T>A), 9550155(c.83+211G>T), 9550332(c.83+388A>G), 9550816(c.83+872A>T), 9550943(c.83+999G>A), 9550983(c.83+1039T>C), 9551056(c.83+1112A>G), 9551080(c.83+1136A>G), 9551132(c.83+1188G>A), 9551244(c.83+1300G>A), 9551334(c.83+1390T>G), 9551341(c.83+1397G>A), 9551599(c.83+1655G>A), 9551786(c.84-1532A>G), 9551793(c.84-1525A>G), 9551959(c.84-1359C>T), 9552020(c.84-1298A>T), 9552052(c.84-1266A>G), 9552501(c.84-817G>T), 9552570(c.84-748G>A), 9552602(c.84-716T>C), 9552790(c.84-528C>T), 9552853(c.84-465G>A), 9552889(c.84-429C>T), 9553120(c.84-198T>G), 9553896(c.315+77A>G), 9553931(c.315+112G>C), 9553973(c.315+154A>G), 9554199(c.315+380C>T), 9554225(c.315+406G>A), 9554272(c.315+453C>T), 9554417(c.315+598G>A), 9554548(c.315+729C>T), 9554603(c.315+784A>T), 9554617(c.315+798C>T), 9554643(c.315+824C>G), 9554688(c.316-850G>A), 9554754(c.316-784C>T), 9555070(c.316-468T>C), 9555217(c.316-321T>G), 9555325(c.316-213A>T), +1kb 9555684(c.2330G>T), 9555760(c.2406A>G), 9555761(c.2407A>C), 9555767(c.2413T>A), 9555783(c.2429G>A), 9555793(c.2439T>C), 9555804(c.2450G>T), 9555810(c.2456C>T), 9556527(c.3173A>G), 9556573(c.3219A>G), 9556730(c.3376G>A), 9556746(c.3392C>T), 9557136(c.3782T>C), 9557393(c.4039A>G), 9557398(c.4044A>G), 9557447(c.4093C>T), 9557509(c.4155T>C), 9557545(c.4191T>C), 9557863(c.4509G>A), 9557975(c.4621G>A), 9558341(c.4987A>G), 9558618(c.5264A>G), 9558754(c.5400T>C), 9559650(c.6296T>G), 9559712(c.6358A>C), 9559784(c.6430T>A), 9559858(c.6504T>C), 9559863(c.6509T>C), 9560096(c.6742T>C), 9560253(c.6899T>C), 9560345(c.6991T>C), 9560406(c.7052G>C), 9560420(c.7066C>T), 9560479(c.7125A>T), 9560557(c.7203A>G),
Insertions	-1kb 9547479 (c.-628_-627insA), 5'UTR CDS 3'UTR INTRON 9550768 (c.83+825dupG), 9553065 (c.84-246_84-245dupAA), 9553855 (c.315+42dupA), 9555310 (c.316-229_316-228dupGT), +1kb 9556088 (c.2734_*2735insA),
Deletions	-1kb 9547051 (c.-1055delA), 5'UTR CDS 3'UTR INTRON 9549454 (c.46-443delA), 9550417 (c.83+479delG), 9551014 (c.83+1073_83+1081delTGTTGTCGT), 9551351 (c.83+1408_83+1409delTG), 9551531 (c.83+1593delA), +1kb 9558493 (c.5140_5141delCA), 9559242 (c.5889delG), 9559844 (c.6491_6495delTCAGG), 9560306 (c.6953delA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	0
synonymous substitutions	9549934 (p.Leu25Leu), 9553351 (p.Ala39Ala),
non-synonymous substitutions
B6 transcript (ENSMUST00000186467)	TRSSHTLAEAPTKHSMPVPNSFSYLLPRIYRIWELRMFA*
MSMv4 transcript	TRSSHTLAEAPTKHSMPVPNSFSYLLPRIYRIWELRMFA*
homology	100.00 (40 / 40)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Adhfe1 (ENSMUSG00000025911)
Transcript ID	ENSMUST00000186467


..........GTTCTAAAAAAGACCCCTTGTTTTAGGAAAACTTTGGCCCTAACTATAAT
ATTAAAAGTATAGTGCTTTTTGGTGTTGGTTCAGGTGGTACATTTGGCCAATGGATTGCT
TTAAGTCCAGAAATAGTTGTCATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCTTG
GGTTTTAGATATTGTCAAAATATCTGGCATTCACTATGGAACCAAGGCTGCCCTGGAACT
CAGGGCCAAGTGCTGAGATTATAATCGAGCAGCAGATTTCATGTTTATTTCTGTCCTAGA
TGTTTTTCCCTGTTTCATTGTCTTATTTTGTTCTTAATAAACTTATCTTTGCATAATTAG
TATTTGCATTATTTTTGTAAGTTATTAATAGCAATTCTAGAATTGAGGAAGGGGTGTTTT
CTTTAAAGCAAGTTGGTCTGTCAGTTGCTAGCAGTTGGGAATTGGGTTGGAGGTTACTCT
TAGTGTGGTTTCAGTTTTATAAGGTTACTTGTAGAAATGCAAGGAAAGCTCAACTTGTCT
CTTAACTCATGGAAACACTGGATTGTTAGTGACTTTGGGTAAAGCTCTAACTAGGCTCAT
CTTTACTGAACTCTTCCACTGGAGAAGAACTATAAACTCTTCCAGTTTATAGTTCTAAGT
ATCCATGAGAACTTTATCAAAGCCAAGCTGTTGACAGCTAAAAGTAACCTCTAGCCCAAT
TCCCAACTGCTAACAACAGGACTTAACTTTCAGAGATTAATTTGGGGTTTTGGTTGGTCA
GTTTGGGGCCTTTTTTTTTTTTTTTTTTTTTTTTTAAGTTTACGAAAAACCCAGTGGGGT
TCTTGCCATTGAGACATTTCAGAGTTTCCTGAGAAATGAGCTAAGACTGGGTCAGGTGAC
CTTGCATTGGAGGCAGAAGTTTTCCTCCTGGAGTCCAGCAGCGACCGGATTGGCTGTTAG
TGGGGGTGGAGTAGGCGGCGAACAAGGAGAACTGCCATGGCTGCAGCTGC
ACGCGCTCGAGTCACACACTTGCTGAGGCACCTACAAAGCACAGC
GTGAGTACAGGCTGCACTGAGGGTG..........ACATTCTCCTTTTCCTTTTCCCTAG
ATGCCAGTGCCCAACTCATTCTCATACCTACTCCCAAG
GTAACACATTTTGAGTTTTCGCATC..........ACTTATGAGTTAATTTTTATTATAG
GATCTACAGAATATGGGAGCTAAGAATGTTTGCCTGATGACAGACAAGAACCTCTCCCAGCTCCCTCCTGTACAAATAGTTATGGATTCCCTATCGACGAATGGCATCAGTTTTCAGGTTTATGATGATGTAAGGGTGGAACCTACAGATGGAAG
GTAATGCTATGGGCTTCTTAGTTAC..........AACCTTTGTTTTCTGTTCGCTTAAG
CTTCATGGATGCAATTGAATTTGCCAAAAAGGGAGCGTTTGATGCCTATGTTGCTGTGGGTGGGGGCTCCACCATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCAGCCCTCACTCTGAGTTCCTTGATTATGTCAATGCCCCCATTGGGAAGGGGAAGCCAGTAACTGTGCCTCTTAAACCTCTGATTGCAG
GTAAACACTGCTCATTTGCTTTATT..........TAATATCAATATTATTTTTTTCAAG
TTCCAACTACCTCAGGGACTGGCAGTGAGAC
TACCGGGGTTGCCATTTTTGACTATGAGCATTTGAAAGTAAAAACTGGTAAGAATTTTAT
TCCTAACTCTTTTGAAATTCTCTCTCACACCCGTCTACCTCACCCCTTTGCCCTTTGTGC
TATTATTTAGAAATCAGAGAATTAAAGGAACTCAAGCACACATTTCTCTTCCCAAGAAGA
GGAGATATGAAGCTGGACAAGTAAGTTTCTTGTTAACAACTACCCGAAAAGCCTATCAAA
ATGCCAGGAATCTCTTTGCATATACATTTTTATTTGTGAGCATGTATAAATGTATTCCAT
AGCTGTGAGAATGTTTTTGGAGGCCAGAAGAAGCTGTCAGATCCCCTGGAGCTGGAGTCA
CAGGCAGTAGTGAGCCCCTTGACTCGGGTGCTGGAAATCGAGCTTGGGTTCTTTGAACAA
ACAATGCTCTTAGCCACAGAGCCATCTTCCCAGACCCCCCAATGACATAAATCTTACTTA
ATAAGCAATTTCCCTGCCCATATCAGTGGTTCCCTCTGACTTTTTTTTACATTTTATATC
AATTTTATGAAAAGATGCTTGTATACAACAAAAAGCATAGTTTTCAAAGACTCTGTTTGG
TGGGTTTTAACAAATACACAAGGCAAATCAAGATCCTAGACATTCCAGATCTCCACAAAG
TTGCCTCACTTTCCATCCCAGCCAGCCTGTCACTCAGGCCCATCCCCAGATCACTTCTGT
TTTCTGTCTTCCTAGGCATTTGAGGCCTACCTTCTCCTTGACTATGGTAGAAATAAGTGT
GGTGCAGCAACTGCTTCCAGCCTTTGTTGACGTTCAGCTACACACTCAGAATAACTGCTT
TATTCTTGTTAAATTATGTGATCCCTTCACATGGTTAACAGCAATAACAAGCAACTCTTA
AAGTCAGCCTTATGGTGTTTACATGCATATTATCTCATTTTATCCTTGTAGCTCCTGAGG
CAGATGTTGTTACAGTGTGTATGTAAGTGCATGAGGACAT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GTTCTAAAAAAGACCCCTTGTTTTAGGAAAACTTTGGCCCTAACTATAAT ATTAAAAGTATAGTGCTTTTTGGTGTTGGTTCAGGTGGTACATTTGGCCAATGGATTGCT TTAAGTCCAGAAATAGTTGTCATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCTTG GGTTTTAGATATTGTCAAAATATCTGGCATTCACTATGGAACCAAGGCTGCCCTGGAACT CAGGGCCAAGTGCTGAGATTATAATCGAGCAGCAGATTTCATGTTTATTTCTGTCCTAGA TGTTTTTCCCTGTTTCATTGTCTTATTTTGTTCTTAATAAACTTATCTTTGCATAATTAG TATTTGCATTATTTTTGTAAGTTATTAATAGCAATTCTAGAATTGAGGAAGGGGTGTTTT CTTTAAAGCAAGTTGGTCTGTCAGTTGCTAGCAGTTGGGAATTGGGTTGGAGGTTACTCT TAGTGTGGTTTCAGTTTTATAAGGTTACTTGTAGAAATGCAAGGAAAGCTCAACTTGTCT CTTAACTCATGGAAACACTGGATTGTTAGTGACTTTGGGTAAAGCTCTAACTAGGCTCAT CTTTACTGAACTCTTCCACTGGAGAAGAACTATAAACTCTTCCAGTTTATAGTTCTAAGT ATCCATGAGAACTTTATCAAAGCCAAGCTGTTGACAGCTAAAAGTAACCTCTAGCCCAAT TCCCAACTGCTAACAACAGGACTTAACTTTCAGAGATTAATTTGGGGTTTTGGTTGGTCA GTTTGGGGCCTTTTTTTTTTTTTTTTTTTTTTTTTAAGTTTACGAAAAACCCAGTGGGGT TCTTGCCATTGAGACATTTCAGAGTTTCCTGAGAAATGAGCTAAGACTGGGTCAGGTGAC CTTGCATTGGAGGCAGAAGTTTTCCTCCTGGAGTCCAGCAGCGACCGGATTGGCTGTTAG TGGGGGTGGAGTAGGCGGCGAACAAGGAGAACTGCCATGGCTGCAGCTGC
1	EXON 1	9,548,107	9,548,151	-	0	45	ACGCGCTCGAGTCACACACTTGCTGAGGCACCTACAAAGCACAGC
	INTRON 1 - 2	9,548,152	9,549,906			1,755	GTGAGTACAGGCTGCACTGAGGGTG..........ACATTCTCCTTTTCCTTTTCCCTAG
2	EXON 2	9,549,907	9,549,944	0	2	38	ATGCCAGTGCCCAACTCATTCTCATACCTACTCCCAAG
	INTRON 2 - 3	9,549,945	9,553,317			3,373	GTAACACATTTTGAGTTTTCGCATC..........ACTTATGAGTTAATTTTTATTATAG
3	EXON 3	9,553,318	9,553,472	2	-	155	GATCTACAGAATATGGGAGCTAAGAATGTTTGCCTGATGACAGACAAGAACCTCTCCCAG CTCCCTCCTGTACAAATAGTTATGGATTCCCTATCGACGAATGGCATCAGTTTTCAGGTT TATGATGATGTAAGGGTGGAACCTACAGATGGAAG
	INTRON 3 - 4	9,553,473	9,553,622			150	GTAATGCTATGGGCTTCTTAGTTAC..........AACCTTTGTTTTCTGTTCGCTTAAG
4	EXON 4	9,553,623	9,553,819	-	-	197	CTTCATGGATGCAATTGAATTTGCCAAAAAGGGAGCGTTTGATGCCTATGTTGCTGTGGG TGGGGGCTCCACCATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCAGCCCTCACTC TGAGTTCCTTGATTATGTCAATGCCCCCATTGGGAAGGGGAAGCCAGTAACTGTGCCTCT TAAACCTCTGATTGCAG
	INTRON 4 - 5	9,553,820	9,555,537			1,718	GTAAACACTGCTCATTTGCTTTATT..........TAATATCAATATTATTTTTTTCAAG
5	EXON 5	9,555,538	9,555,568	-	-	31	TTCCAACTACCTCAGGGACTGGCAGTGAGAC
	3' upstream sequence						TACCGGGGTTGCCATTTTTGACTATGAGCATTTGAAAGTAAAAACTGGTAAGAATTTTAT TCCTAACTCTTTTGAAATTCTCTCTCACACCCGTCTACCTCACCCCTTTGCCCTTTGTGC TATTATTTAGAAATCAGAGAATTAAAGGAACTCAAGCACACATTTCTCTTCCCAAGAAGA GGAGATATGAAGCTGGACAAGTAAGTTTCTTGTTAACAACTACCCGAAAAGCCTATCAAA ATGCCAGGAATCTCTTTGCATATACATTTTTATTTGTGAGCATGTATAAATGTATTCCAT AGCTGTGAGAATGTTTTTGGAGGCCAGAAGAAGCTGTCAGATCCCCTGGAGCTGGAGTCA CAGGCAGTAGTGAGCCCCTTGACTCGGGTGCTGGAAATCGAGCTTGGGTTCTTTGAACAA ACAATGCTCTTAGCCACAGAGCCATCTTCCCAGACCCCCCAATGACATAAATCTTACTTA ATAAGCAATTTCCCTGCCCATATCAGTGGTTCCCTCTGACTTTTTTTTACATTTTATATC AATTTTATGAAAAGATGCTTGTATACAACAAAAAGCATAGTTTTCAAAGACTCTGTTTGG TGGGTTTTAACAAATACACAAGGCAAATCAAGATCCTAGACATTCCAGATCTCCACAAAG TTGCCTCACTTTCCATCCCAGCCAGCCTGTCACTCAGGCCCATCCCCAGATCACTTCTGT TTTCTGTCTTCCTAGGCATTTGAGGCCTACCTTCTCCTTGACTATGGTAGAAATAAGTGT GGTGCAGCAACTGCTTCCAGCCTTTGTTGACGTTCAGCTACACACTCAGAATAACTGCTT TATTCTTGTTAAATTATGTGATCCCTTCACATGGTTAACAGCAATAACAAGCAACTCTTA AAGTCAGCCTTATGGTGTTTACATGCATATTATCTCATTTTATCCTTGTAGCTCCTGAGG CAGATGTTGTTACAGTGTGTATGTAAGTGCATGAGGACAT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Adhfe1 (ENSMUSG00000025911)
Transcript ID	ENSMUST00000186467

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 40 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information