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Target CDS Information

Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Cross Reference
EMBL AC084389, AC123854
GO GO:0002682, GO:0003674, GO:0005575, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0008150
MGI_trans_name Tmem131-003
OTTP OTTMUSP00000068815
OTTT OTTMUST00000126157
UniParc UPI00053BD862
Uniprot/SPTREMBL A0A0A6YXP8
Vega_transcript OTTMUST00000126157, Tmem131-003
Vega_translation 179003, OTTMUSP00000068815
Definition protein_id:ENSMUSP00000142080
translation:
KLTAKKLEGVHDGAIQITTDYETFQSHFRTLVLVPPRALLNLLRPPNLTTVTGKCP

Chromosome 1
Length
Position(start - end)
296
36,824,484 - 36,824,781
Orient to Chromosome minus
Link Location : (1:36824484-36824781)
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Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000186486
Reports
substitution
cSNPs0
Insertion4
Deletion6
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num0
non-synonymous num0
synonymous substitutions
non-synonymous substitutions
B6 transcript
(ENSMUST00000186486)
KLTAKKLEGVHDGAIQITTDYETFQSHFRTLVLVPPRALLNLLRPPNLTTVTGKCP*
MSMv4 transcript
KLTAKKLEGVHDGAIQITTDYETFQSHFRTLVLVPPRALLNLLRPPNLTTVTGKCP*
homology100.00 (57 / 57)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000186486
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........ACTTCTGCCTGATTGTCAGAGCTCCCTAGCCTTTCCTAGAACTTCAGGGA
AGTAGCTGCTAGGAAATGGCCTCTCCATCCCTGACTCCTGATTGTCCTTGTCCGAAGTTC
TCAGCATATCATATAGTTGTAAATATAGACATAAGATGTAGAAACCTTAGTGTCTCCTAG
TGGACACTTTATTCAGTAACATTGTTAAACATGTGATCTGGTGTCTAATACAGTCCTTTT
CTATCTCTCTAGTACTTTGTATTGCCCCCCAAAATAGAAGAACGCTTCATAGATTTTGGA
GTACTGAGTGCTACAGAAGCAAGTAGTATTTTATTTGCAATTATAAACAGCAATCCAATT
GAGGTAAAGACATTGTTTTTATTCTCAGTTACACTGAAGATTTCATGTTTGTGCTGCAAG
ATCACTTTTTGTTTTCTCTTTGAAGCTGGCAATAAAAAGTTGGCATATCATAGGAGATGG
CTTATCAATAGAACTTGTAGCTACAGAGAGAGGCAACAGAAGCACGGTGATTGCAAGCCT
TCCAGAACTGGAGCGGTCCTCTTTGCCCGACCAGTCCCCGGTGAGTGGGCCTCTTACTGC
TTCAAGTTAGAATGGGTGTTTCCGGCCCAAGTGAAAGAGCAGGGCTATGTGCCCCACTCG
GCAAGTACTGTGACCTGTTTCCCGGTGGCCATGAGCGCTAGACACTGCGGGGGCCTTGTG
GAGCCCGTCTACCACAGTGAAGCAGGCACAGAGTAGATGATGAGGGCACAGAAGAATTGG
AAGGATCTGTACCACACTGTCATGAAAGGAGAGTGTCTGCAGTGAGGTTCTGTGCATCAG
CTGTGCAGATGCTGTCACACAAAGTCCACACATGGGTCTGTGTGGGCATAGCTGACCACC
AGAGTGCTCCCCCTTCAGTAAGACCCTTGAACCTGCACAGCTACTAAATGATGCCATTTT
TACTGCTTCAGGTAACATTAGCTTCAGGACACTTTGCAGTGTTCAGAGTC
1 EXON 1 36,824,716 36,824,781 - 0 66
AAACTTACTGCCAAGAAGCTAGAAGGGGTCCATGATGGGGCCATACAGATCACAACCGAC
TACGAG
INTRON 1 - 2 36,824,589 36,824,715 127
GTAAGCTGACCAGCGGGGTTTTCTC..........TACCCCTCTTGTGCCTTTAATACAG
2 EXON 2 36,824,405 36,824,588 0 - 184
ACCTTTCAGAGCCATTTCAGAACACTAGTGCTTGTACCTCCCAGGGCTCTGCTGAACCTC
CTCAGACCTCCTAACTTAACCACAGTGACAGGAAAGTGCCCTTAGCACACTGAGAGTCAC
GCTGTTAAAAACCTGTCTACAGATCACCACAGAGCAGGTCTGGACTGGACTTCCTGAGCT
GCAG
INTRON 2 - 3 36,823,154 36,824,404 1,251
GTCTGACTCTGCACTCGTGTTTTGC..........GGTGGTCTGCCTCTTTCCTCCATAG
3 EXON 3 36,823,067 36,823,153 - - 87
ATCCTGACCATCCCTGTGAAAGCTGTGATCGCCGTGGGCTCGCTGACCTGCTTCCCCAAG
CACATGGTTCTTCCCCCTTCCTTCCCA
INTRON 3 - 4 36,819,216 36,823,066 3,851
GTAAGCCAGCTCACGCTTCGCTTGA..........CTGAACTTGTGTTTTCTTCTTTCAG
4 EXON 4 36,819,063 36,819,215 - - 153
GGGAAAATAGTTCATCAGAGCTTAAATATTATGAATTCCTTCTCACAGAAGGTGAAGATA
CAGCAAATAAGGTCTTTGTCAGAAGACGTACGATTCTACTACAAACGATTACGGGGTAAT
AGGGAAGACTTGGAGCCAGGGAAGAAGTCTAAG
INTRON 4 - 5 36,818,969 36,819,062 94
GTTTGTTAGAAATGAGAATTTCCAG..........ATGGTCGTCCTGTGTTCCTTTACAG
5 EXON 5 36,818,893 36,818,968 - - 76
ATTGCAAACATTTATTTTGACCCTGGGCTGCAGTGTGGGGATCACTGCTATATCGGCTTG
CCTTTCCTATCCAAAT
INTRON 5 - 6 36,818,776 36,818,892 117
GTAAGTCTTCCATCCCGCCTTCCTT..........TGCTGACTTGTGCTTCCTCTTTTAG
6 EXON 6 36,818,660 36,818,775 - - 116
CTGAACCCAAAGTACAGCCTGGGGTGGCCATGCAGGAGGACTTGTGGGATGCCGACTGGG
ACGCACATCAGAGCTTGTTCAAGGCTTGGATGGGGATAAAGGAAAACGCAGGACAT
3' upstream sequence
AGGTATGAGCTTCTGCTTCATTCAGGAGTTTTAGAGGGTAGCCCACGGGGCAGCTCTGCT
GTTGTGTCACATTGTCATTGTTAGCATGTGTCGCTAAGAAATGCACGCACTCCTGTGTCC
TCTTTTCTCCAGTGCATGAGATCTGTCCTTAAAAATCAGAGGAACTATTTGAAATCGTCC
TTGTTTATAGTGACTGCCATGTCCACCTTAGACACAGAGTTATGCATGAGAAGAAAGATT
TGTCTGTCACTGGCCTCTCCAAAAGGCAACTTAGGCTTAATCCCAACAGGAGACCAAATT
TATTTGTTCCTTATGAAAAATGCTACTTCCTTTTTCTTCAAGTGCTGGTCTTTTGCTGGG
GAAACAGGGCCCTGCGGTGGCCTCCCCACTGCATCTTTGGCAGGTCGAAATAGGCTTCTG
GAAACCCAGTGCTGTACCTGGACTCAAACACTGAAATGTGGTGTTGGTATCACAGTAGCC
TGGCCCTTTCACGCACAGTAGAAAAGAACTTTTCCAGAAACAGGAATACTGAAGAGTAAT
AAGTACTTTTCTCACTTGGCTGACGTGATATGTATTGGTCAGAGTTAAAGTATTCTCCTA
TAAGGACAGTATGAAGTTTTAAAGCTTTGGTTAGCACACAGAGCATGGGTGTTGCTGGCA
CCGTCGTGTACACATGCGTACTCTTGTTCTTACAGTTCCTCTGCCTCCTTGCTGGTCCCT
TTCTTCCTTAGAGGAATCCCCTGATTTTGCTCTCATGATGTATTTTCCATTACCTCCTCT
TGGCCTTCCTTGAGACCAGGAGATGGTTCCCTCTTCACTCTTGGCTGTTTTAGATAGTGC
AGTGATAAATACTGCTTTTTGCAAATGTCTCTACAGTATGTTGACTTAACAACCTTAGGG
AACGTCCCCTGAATAGTAGAGATATAATAGTTCTACTGTTAATTTTCAAGGACCTCCATA
CTGATTTCCATAATGGCTGGACAAGTTGACATTCCCATCT..........

Sequence Detail Report

Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000186486
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 57 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information