MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Cspp1 (ENSMUSG00000056763)

Cross Reference

EMBL	AC102570, AC159972
GO	GO:0000922, GO:0005654, GO:0005813, ...show all
goslim_goa	GO:0005575, GO:0005622, GO:0005623, ...show all
MGI_trans_name	Cspp1-027
OTTP	OTTMUSP00000066334
OTTT	OTTMUST00000118996
UniParc	UPI0004620FD3
Uniprot/SPTREMBL	A0A087WQ80
Vega_transcript	Cspp1-027, OTTMUST00000118996
Vega_translation	178703, OTTMUSP00000066334

Definition

protein_id:ENSMUSP00000140076
translation:

QRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPA
LQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMR
KQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTF
QNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGA
DLDTICTDNAQGRRMVSNQFKFLS

Chromosome

Length
Position(start - end)

17,185
10,112,876 - 10,130,062

Orient to Chromosome

plus

Link

Location : (1:10112876-10130062)
/

Detail Map

name	Cspp1 (ENSMUSG00000056763)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Cspp1 note : centrosome and spindle pole associated protein 1 [Source:MGI Symbol;Acc:MGI:2681832]

name	Cspp1 (ENSMUSG00000056763)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000071087

name	Cspp1 (ENSMUSG00000056763)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186294

name	Cspp1 (ENSMUSG00000056763)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000187226

name	Cspp1 (ENSMUSG00000056763) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS35511.1 Uniprot/SWISSPROT:B2RX88 RefSeq_peptide:NP_080769 RefSeq_mRNA:NM_026493.3 RefSeq_mRNA_predicted:XM_006495483 RefSeq_mRNA_predicted:XM_006495484 RefSeq_peptide_predicted:XP_006495542.2 RefSeq_peptide_predicted:XP_006495545.1 RefSeq_peptide_predicted:XP_006495546.1 RefSeq_peptide_predicted:XP_006495547.1 RefSeq_peptide_predicted:XP_006495549.1 Vega_transcript:Cspp1-004 Vega_transcript:OTTMUST00000067846 UCSC:uc007ahi.1 GO:GO:0000922 GO:GO:0000922 GO:GO:0005515 GO:GO:0005515 GO:GO:0005654 GO:GO:0005654 GO:GO:0005737 GO:GO:0005813 GO:GO:0005813 GO:GO:0005819 GO:GO:0005819 GO:GO:0005874 GO:GO:0032467 GO:GO:0032467 GO:GO:0051781 GO:GO:0051781 MGI_trans_name:Cspp1-004 Vega_translation:178694 Vega_translation:OTTMUSP00000034200 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 OTTP:OTTMUSP00000034200 OTTT:OTTMUST00000067846 UniParc:UPI0000F0887C
definition	note : transcript_id=ENSMUST00000071087 protein_id : ENSMUSP00000068804 translation : MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVDGDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQTPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPASNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRIYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSIDQNLATSNAENLEDSANKNSGPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICTDNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLVDPDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAAHA

name	Cspp1 (ENSMUSG00000056763) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SWISSPROT:B2RX88 RefSeq_peptide_predicted:XP_006495544.2 RefSeq_peptide_predicted:XP_011236667.1 Vega_transcript:Cspp1-017 Vega_transcript:OTTMUST00000118990 UCSC:uc011wih.1 GO:GO:0000922 GO:GO:0005515 GO:GO:0005654 GO:GO:0005737 GO:GO:0005813 GO:GO:0005819 GO:GO:0005874 GO:GO:0032467 GO:GO:0051781 MGI_trans_name:Cspp1-017 Vega_translation:178700 Vega_translation:OTTMUSP00000066332 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005737 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 OTTP:OTTMUSP00000066332 OTTT:OTTMUST00000118990 UniParc:UPI0001E88EB2
definition	note : transcript_id=ENSMUST00000186294 protein_id : ENSMUSP00000139775 translation : MDLNCYPHLVAGHAHSYLIWRGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVDGDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQTPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPASNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRIYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICTDNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLVDPDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAAHA

name	Cspp1 (ENSMUSG00000056763) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Cspp1-027 Vega_transcript:OTTMUST00000118996 Uniprot/SPTREMBL:A0A087WQ80 EMBL:AC102570 EMBL:AC159972 GO:GO:0000922 GO:GO:0005654 GO:GO:0005813 GO:GO:0005819 GO:GO:0005874 GO:GO:0032467 GO:GO:0051781 MGI_trans_name:Cspp1-027 Vega_translation:178703 Vega_translation:OTTMUSP00000066334 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 OTTP:OTTMUSP00000066334 OTTT:OTTMUST00000118996 UniParc:UPI0004620FD3
definition	note : transcript_id=ENSMUST00000187226 protein_id : ENSMUSP00000140076 translation : QRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICTDNAQGRRMVSNQFKFLS

name
type	misc_feature
link
xref
definition	note : contig AC159972.5 140675..199094(1)

name	Cspp1 (ENSMUSG00000056763)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000067968 Vega_transcript:OTTMUST00000067968 MGI_trans_name:Cspp1-012 OTTT:OTTMUST00000067968
definition	note : retained_intron note : transcript_id=ENSMUST00000136283

name	Cspp1 (ENSMUSG00000056763)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000067969 Vega_transcript:OTTMUST00000067969 MGI_trans_name:Cspp1-013 OTTT:OTTMUST00000067969
definition	note : retained_intron note : transcript_id=ENSMUST00000128164

name	Cspp1 (ENSMUSG00000056763)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000068023 Vega_transcript:OTTMUST00000068023 MGI_trans_name:Cspp1-014 OTTT:OTTMUST00000068023
definition	note : retained_intron note : transcript_id=ENSMUST00000136898

name	Cspp1 (ENSMUSG00000056763)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000068024 Vega_transcript:OTTMUST00000068024 MGI_trans_name:Cspp1-015 OTTT:OTTMUST00000068024
definition	note : retained_intron note : transcript_id=ENSMUST00000148663

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Cspp1 (ENSMUSG00000056763)
Transcript ID	ENSMUST00000187226

Reports
substitution
cSNPs	3
Insertion	23
Deletion	19
SNPs	-1kb 10107900(c.-4976G>A), 10108016(c.-4860A>G), 10108030(c.-4846C>T), 10108036(c.-4840A>G), 10108086(c.-4790A>G), 10108521(c.-4355C>A), 10108633(c.-4243C>T), 10108671(c.-4205G>A), 10108960(c.-3916T>C), 10109092(c.-3784G>A), 10109136(c.-3740G>T), 10110234(c.-2642A>G), 10110346(c.-2530C>T), 10110486(c.-2390G>A), 10110507(c.-2369T>C), 10110546(c.-2330T>C), 10110622(c.-2254T>G), 10110626(c.-2250G>A), 10110855(c.-2021A>G), 10110970(c.-1906A>G), 10111077(c.-1799G>A), 10111142(c.-1734C>T), 10111363(c.-1513C>G), 10111375(c.-1501A>G), 10111537(c.-1339C>G), 10111682(c.-1194G>C), 10111904(c.-972T>C), 10111921(c.-955T>C), 10111931(c.-945T>C), 10111934(c.-942T>C), 10112104(c.-772A>T), 10112140(c.-736T>C), 10112170(c.-706A>C), 10112193(c.-683C>T), 10112617(c.-259T>G), 10112619(c.-257A>G), 10112623(c.-253T>C), 10112660(c.-216C>T), 10112695(c.-181C>T), 10112851(c.-25C>A), 10112852(c.-24G>A), 5'UTR CDS 10112899(c.24T>G), 10112932(c.57G>A), 10127472(c.627C>A), 3'UTR 10134095(c.201A>G), INTRON 10113114(c.147+92A>G), 10113210(c.147+188C>T), 10113364(c.148-239T>C), 10113547(c.148-56G>A), 10113742(c.252+35A>C), 10113855(c.252+148C>G), 10113895(c.252+188G>T), 10114002(c.252+295A>G), 10114009(c.252+302A>T), 10114061(c.252+354C>G), 10114113(c.252+406C>T), 10114318(c.252+611T>C), 10114319(c.252+612G>T), 10114363(c.252+656A>G), 10114401(c.252+694G>C), 10114427(c.252+720T>C), 10114450(c.252+743G>C), 10114468(c.252+761A>G), 10114469(c.252+762C>A), 10114470(c.252+763G>T), 10114484(c.252+777A>G), 10114486(c.252+779G>A), 10114492(c.252+785G>A), 10114633(c.252+926T>A), 10114635(c.252+928A>T), 10114728(c.252+1021A>T), 10114779(c.252+1072T>C), 10114798(c.252+1091C>T), 10114800(c.252+1093T>C), 10114801(c.252+1094T>A), 10114803(c.252+1096T>C), 10114866(c.253-1152G>T), 10115159(c.253-859T>G), 10115169(c.253-849T>A), 10115349(c.253-669A>G), 10115624(c.253-394G>C), 10115748(c.253-270G>T), 10115794(c.253-224G>A), 10115846(c.253-172A>T), 10115891(c.253-127A>G), 10115905(c.253-113A>G), 10115917(c.253-101G>C), 10116910(c.437+179T>C), 10116938(c.437+207C>G), 10116948(c.437+217T>C), 10116977(c.437+246A>G), 10117032(c.437+301G>T), 10117136(c.437+405G>A), 10117142(c.437+411C>T), 10117231(c.437+500G>A), 10117234(c.437+503T>C), 10117241(c.437+510T>C), 10117252(c.437+521G>C), 10117269(c.437+538A>T), 10117390(c.437+659A>G), 10117397(c.437+666C>T), 10117411(c.437+680C>T), 10117524(c.437+793G>A), 10117673(c.437+942A>G), 10117686(c.437+955C>T), 10117750(c.437+1019C>G), 10117753(c.437+1022C>T), 10123697(c.438-2643A>G), 10123715(c.438-2625G>A), 10123723(c.438-2617G>A), 10123791(c.438-2549T>C), 10123855(c.438-2485G>T), 10123933(c.438-2407G>T), 10124020(c.438-2320C>T), 10124291(c.438-2049G>A), 10124300(c.438-2040A>C), 10124656(c.438-1684G>A), 10124734(c.438-1606G>C), 10125913(c.438-427T>C), 10125914(c.438-426G>C), 10125941(c.438-399C>T), 10125944(c.438-396T>C), 10125968(c.438-372G>A), 10125975(c.438-365T>C), 10125979(c.438-361C>T), 10126186(c.438-154G>C), 10126241(c.438-99G>A), 10126706(c.577+227G>T), 10126759(c.577+280A>T), 10126936(c.577+457T>C), 10126998(c.578-425T>C), 10127048(c.578-375T>C), 10127765(c.718+202G>A), 10127853(c.718+290G>A), 10128131(c.718+568A>G), 10128197(c.718+634C>G), 10128237(c.718+674C>T), 10128270(c.718+707G>A), 10128283(c.718+720T>C), 10128326(c.718+763C>T), 10129603(c.719-383C>T), 10129723(c.719-263A>G), 10130212(c.23+127C>T), 10130536(c.23+451C>T), 10130783(c.23+698G>A), 10130814(c.23+729A>G), 10130852(c.23+767T>C), 10130980(c.23+895C>T), 10131211(c.23+1126T>C), 10131786(c.24-668A>G), 10131927(c.24-527T>C), 10132059(c.24-395T>G), 10132247(c.24-207A>G), 10132322(c.24-132G>A), 10132366(c.24-88C>T), 10132671(c.87+154G>C), 10132845(c.88-319G>A), 10132885(c.88-279G>A), 10132896(c.88-268T>C), 10132898(c.88-266T>A), 10132926(c.88-238G>T), 10133721(c.198-371T>C), +1kb 10134644(c.4582C>T), 10134725(c.4663A>G), 10135037(c.4975A>G), 10135405(c.5343T>C), 10135645(c.5583G>T), 10135951(c.5889G>A), 10136527(c.6465T>C), 10136714(c.6652C>T), 10136977(c.6915G>A), 10137051(c.6989A>G), 10137114(c.7052C>T), 10137161(c.7099A>G), 10137231(c.7169C>T), 10138680(c.8618C>G), 10139131(c.9069C>T), 10139137(c.9075A>G), 10139147(c.9085T>A),
Insertions	-1kb 10107975 (c.-4902_-4901dupTT), 10108326 (c.-4550_-4549insT), 10108641 (c.-4235_-4234insTCAG), 10111337 (c.-1539dupT), 10111454 (c.-1422_-1421insA), 10112858 (c.-18_-17insTT), 10112863 (c.-14_-13dupTT), 5'UTR CDS 3'UTR INTRON 10114316 (c.252+609_252+610insA), 10114728 (c.252+1023dupG), 10114907 (c.253-1111_253-1110insG), 10115222 (c.253-794dupA), 10117511 (c.437+788_437+791dupCAGC), 10117870 (c.437+1139dupG), 10117886 (c.437+1155_437+1156insAAAG), 10118068 (c.437+1336_437+1337dupTT), 10124627 (c.438-1710_438-1709insCTGT), 10127158 (c.578-259dupT), 10129238 (c.719-746_719-745insTGTA), 10129414 (c.719-569_719-565dupATCTG), 10133954 (c.198-136_198-135dupTG), +1kb 10135133 (c.5071_5072insGG), 10137506 (c.7444_7445insA), 10138074 (c.8012_8013insT),
Deletions	-1kb 10107959 (c.-4916_-4914delTTC), 10112099 (c.-776delT), 10112191 (c.-684delC), 10112194 (c.-681delC), 10112824 (c.-51delT), 5'UTR CDS 3'UTR INTRON 10113171 (c.147+151_147+152delCA), 10113588 (c.148-14delC), 10116566 (c.320-46delT), 10117940 (c.437+1210_437+1211delAT), 10123622 (c.438-2717_438-2714delGCTT), 10126060 (c.438-278_438-277delAT), 10128216 (c.718+657_718+658delGG), 10128413 (c.718+854delT), 10128535 (c.718+978_718+985delATATATTA), 10128829 (c.719-1155_719-1154delTT), 10132036 (c.24-416_24-414delCCT), 10132974 (c.88-189delG), +1kb 10135580 (c.5519delG), 10139148 (c.*9087delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	3
non-synonymous num	0
synonymous substitutions	10112899 (p.Leu8Leu), 10112932 (p.Ala19Ala), 10127472 (p.Arg209Arg),
non-synonymous substitutions
B6 transcript (ENSMUST00000187226)	QRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPA LQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMR KQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTF QNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGA DLDTICTDNAQGRRMVSNQFKFLS*
MSMv4 transcript	QRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPA LQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMR KQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTF QNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGA DLDTICTDNAQGRRMVSNQFKFLS*
homology	100.00 (265 / 265)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Cspp1 (ENSMUSG00000056763)
Transcript ID	ENSMUST00000187226


..........AGGGAGCAGGACCTGTGTGTTCTGAGCGCAGGCCTGCCCCTGCGCCGCTT
CCCAACACCTGGGATTTTACCTGCCAGTGGGCAGAAAAGCACTGTGAGGAAACGACTCTT
TGTAAAGAGGCTAACACACTCAGCTAACTCCCGTGTGGGGACTCTCTTCACGGTCAAGCA
CATTGACGTGCAGTAGGAATCAATCATCCAAGCACAGAGATATCCTCAGCACCTTCTGAG
CAGAAAACACTAGTGTGCCCCTTATACCTTCTCACTAACCCTTGAGCACTCAATAACTCT
TGCTCGGTGAGAAAATTGAGTTCCAGCCCCATTTCCCAAGTTCACACAATACAGATTAAG
CAGAGATGAATTTGAGTAGTAGCTTTTAACAGTATCTTGTATCCTTCCAAGTAAAATACA
GGATACCCAAAAAATCGAGAACTTGGCAAATAGAAGGCATCCAGAAGAAAGTGATGTTGT
AACTCATCAGTAGGTGAGCAGGATAATCACTAAGTCCAATTCTTTAGATTGAGGAAAAGA
GACAAAGAGAAGAAGCCGAGCGCGAGAAGCTGAGAGTTGCTGAAGAGAAGGAAGAAAAGC
GGCTTGCGGAGCAGAGGGCAAGGATTCAGCAAGAGTATGAGGAGGAGCAGGAGCGGAGGA
GGGAGAAGGAGGAGGAGGTGTGTCTGTTTCTCCAGCCAAAGTGAAAGAGTTTTGGTGACT
TGAGAAGATGCGCGGTAGTGTATGAGATAATGGGTATCTTGAAATCCATTTTTAAAGTGC
CCTATTGTTGTCTATGTTGTGTATTATTTTAATTTAAGAAAGAGACAAATTGTTTTTAAA
CTCTAGGCTAATAAAAGATGTCTACTATTTTATTAAATAGATAGATAGTATCTTCGTTTT
GTAAAACACTATCTTTTATATATTCAACTTTACTTCTTTTAGACAAAGTAACATATTTTT
AAACGTTCAGCAAATGCATGCAAGACGTGTGTCTTTTTTAAATTTTAAAG
CAAAGGTTGAAAAATGAAGAACTGATTCGGTTAGCTGAAGAGAGGCGAAAGGAAGCAGAAAGAAAGAAGAAAGAGGAGGAAGAAAAACATAACTTGCAACTTCAGCATTACTATGAGAGAGAAAATATTATCGGAGATGAAACAAAG
GTATGTCTTGGACAGAGGCATGTCG..........TGTACAGAAATCATTTTTTTTTCAG
CACTTGAGACAGCCTTCTCCTGTAGTTCCTGCTCTTCAGAACAAAATTGCAAGCAAACTCCAAAGACCTCCTTCAGTCGACACCATCATAAGTTCCTTCATTCAC
GTACATACTTTTTTCTCAGGGTTAA..........ACTGTGCCTGTCCTGTTGGCCACAG
GAAAGCTCCATGTCCCGGGCACAGTCTCCTCCAGTGCCTGCAAGGAAGAACCAACTCCGTGCAGAAG
GTGGGTTGGACGTCTATAAATGAGA..........CTCTCTTCTCTATGGGAATTTGCAG
AGGAGAAAAAAAATGTGATTATGGAGTTATCAGAAATGAGGAAGCAGCTCCGGAGCGAGGAGAGGCGTTTGCAGGGGCGGCTGCTGCACCTGGACAGTGACGACGAGATCCCCATGAG
GTGCTTCTGCGCATCTTCCTGGAGT..........ATTGATCATGATTTGCTATTTTTAG
GAAAAGAGAGAGGAACCCAATGGATATATTTGACATGGCTAGACATCGGGTACAAGCCCCTGTCAGAAGACCATCGCCTAAGGGCTTAGATGCTACTACTTTTCAGAATATTCATGACTTTAATGAGCTGAGAGAGAGAG
GTGAGCATAAAGTTATAATTGTTCT..........CTTAGTTATGTAACTTTTGTGACAG
ATTCAGATACTCGAGTGGATCTGAGATTAATGTACCCAGATCCTCCCCGAGATCATCACACCTTGGAGATTCAGCAGCAGGCCCTACTCCGAGAGCAGCAGAAGAGGCTTAATAGAATAAAGATGCGGAGAGATGCAGGAG
GTAAGTGCAAGCCTGGCTGCTTTAC..........CATTATTCTTTTGTTCTGTTTACAG
CTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGGTAAGCAACCAGTTCAAATTCCTCAGTTAGAATTTGCGGCCCATGTTAGTTAA
GTGAGTATTCCAGACTTTGAATATG..........ACAATTGTTGTTTTTTTTATTTTAG
CCCAGAGATGACACTAATGATTTTTTGAAAAATTCATTACTAGAATCTGATAGTGCTTTTATTG
GTGAGTATATCTAATGTGATATTAA..........CATATTCTTTGTGTGGCCTGTTTAG
GTGCTTATGGTGAGACATATCCTGTTATTGAAGACAATGCCTTCCCTCCACCATCACAGCTGCCCTCTGCAAGGGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTT
GTATGTATGATCTTCTCAGTTTAGA..........CCTAAATTCTCTCTCTTAACTTTAG
GACGGTAGTCGGCTGCACACCCCACAAGATGGTCTCTCTTTAAAATCTATCTCCAGTGTAAATGTCGATCAAGTTAGAATGA
GAAATGAAGACAGAATGAGAAGACTGACTGAGCAGCAGAAGAAACCCACTAACACAGGTA
CTTCCATACAAGATATCCACTGGCTGATGAAACACCTGCAGGGAAAAGAATTTTCAAGTC
CTTTGAGTTTTACAAAAGGTCAAGGTCATAAACTAGCTTGGAAATCCAGGGCTTGGGATT
AATTCTGCAGCAGGTTCTTCATACTAGGTGTTGGTTAAGAGTATTATCTATATCTAGGCT
GTTTTCAGCAGGTTAAAGTGCTGACTAGTATGTTGGTAATCACTCACTGTTTTTAAGTAA
TATATCTTTTAAAGACAATTTTACCTTTACTTGGCTTTTTGTGACATGAAGAAAAAAAGG
TAGTTTTTCAGTTAATATTCTAAGCCAACAAGCTAATCTTCTCATGATGAGTGGTCTTGG
GTGAAACTTCTCACAAAGCACAGGGCAGCTTCAGACCTCTCCTGCCAGCCTGTGCCACAC
TCTCTTCCTTTCCTTCCTTTTCCTCTAAGTCAGGCTCTTAGTCCCTGGCTGGGACCATGG
GCCAGAGTTGTGGCAGAGTTGCCTATCTTAGGTCTGTTAAGCTGCACTGCAGGATTTTCA
TTGATGCAACTTTTTCTTAAATATTTCTTTCTTTTTTTTTTTTTTTTTAATTTTTTTTTT
AATGTTTTTTTTTTTTTTTTGCTTGTTTGTTTGTTTGGTTTTTGGTTTTTCGAGACAGGG
TTTCTCTGTATGGTCTTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAAC
TCAGAAATCCGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACGC
CCGGTTCTTAAATATTTCTTAATGCTACTTTTAAACTGAACTCATTTCTCCAGTCCAGGA
GTGGTGTTTTGTGATAGTAAATATTTTTCACTAAATATGAAAAAACACAAAAACAATTAA
GGAATGGTACTTTTCATGTCATAATTGAAATGTCTTAAAA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........AGGGAGCAGGACCTGTGTGTTCTGAGCGCAGGCCTGCCCCTGCGCCGCTT CCCAACACCTGGGATTTTACCTGCCAGTGGGCAGAAAAGCACTGTGAGGAAACGACTCTT TGTAAAGAGGCTAACACACTCAGCTAACTCCCGTGTGGGGACTCTCTTCACGGTCAAGCA CATTGACGTGCAGTAGGAATCAATCATCCAAGCACAGAGATATCCTCAGCACCTTCTGAG CAGAAAACACTAGTGTGCCCCTTATACCTTCTCACTAACCCTTGAGCACTCAATAACTCT TGCTCGGTGAGAAAATTGAGTTCCAGCCCCATTTCCCAAGTTCACACAATACAGATTAAG CAGAGATGAATTTGAGTAGTAGCTTTTAACAGTATCTTGTATCCTTCCAAGTAAAATACA GGATACCCAAAAAATCGAGAACTTGGCAAATAGAAGGCATCCAGAAGAAAGTGATGTTGT AACTCATCAGTAGGTGAGCAGGATAATCACTAAGTCCAATTCTTTAGATTGAGGAAAAGA GACAAAGAGAAGAAGCCGAGCGCGAGAAGCTGAGAGTTGCTGAAGAGAAGGAAGAAAAGC GGCTTGCGGAGCAGAGGGCAAGGATTCAGCAAGAGTATGAGGAGGAGCAGGAGCGGAGGA GGGAGAAGGAGGAGGAGGTGTGTCTGTTTCTCCAGCCAAAGTGAAAGAGTTTTGGTGACT TGAGAAGATGCGCGGTAGTGTATGAGATAATGGGTATCTTGAAATCCATTTTTAAAGTGC CCTATTGTTGTCTATGTTGTGTATTATTTTAATTTAAGAAAGAGACAAATTGTTTTTAAA CTCTAGGCTAATAAAAGATGTCTACTATTTTATTAAATAGATAGATAGTATCTTCGTTTT GTAAAACACTATCTTTTATATATTCAACTTTACTTCTTTTAGACAAAGTAACATATTTTT AAACGTTCAGCAAATGCATGCAAGACGTGTGTCTTTTTTAAATTTTAAAG
1	EXON 1	10,112,876	10,113,022	-	0	147	CAAAGGTTGAAAAATGAAGAACTGATTCGGTTAGCTGAAGAGAGGCGAAAGGAAGCAGAA AGAAAGAAGAAAGAGGAGGAAGAAAAACATAACTTGCAACTTCAGCATTACTATGAGAGA GAAAATATTATCGGAGATGAAACAAAG
	INTRON 1 - 2	10,113,023	10,113,602			580	GTATGTCTTGGACAGAGGCATGTCG..........TGTACAGAAATCATTTTTTTTTCAG
2	EXON 2	10,113,603	10,113,707	0	0	105	CACTTGAGACAGCCTTCTCCTGTAGTTCCTGCTCTTCAGAACAAAATTGCAAGCAAACTC CAAAGACCTCCTTCAGTCGACACCATCATAAGTTCCTTCATTCAC
	INTRON 2 - 3	10,113,708	10,116,017			2,310	GTACATACTTTTTTCTCAGGGTTAA..........ACTGTGCCTGTCCTGTTGGCCACAG
3	EXON 3	10,116,018	10,116,084	0	1	67	GAAAGCTCCATGTCCCGGGCACAGTCTCCTCCAGTGCCTGCAAGGAAGAACCAACTCCGT GCAGAAG
	INTRON 3 - 4	10,116,085	10,116,613			529	GTGGGTTGGACGTCTATAAATGAGA..........CTCTCTTCTCTATGGGAATTTGCAG
4	EXON 4	10,116,614	10,116,731	1	2	118	AGGAGAAAAAAAATGTGATTATGGAGTTATCAGAAATGAGGAAGCAGCTCCGGAGCGAGG AGAGGCGTTTGCAGGGGCGGCTGCTGCACCTGGACAGTGACGACGAGATCCCCATGAG
	INTRON 4 - 5	10,116,732	10,126,339			9,608	GTGCTTCTGCGCATCTTCCTGGAGT..........ATTGATCATGATTTGCTATTTTTAG
5	EXON 5	10,126,340	10,126,479	2	1	140	GAAAAGAGAGAGGAACCCAATGGATATATTTGACATGGCTAGACATCGGGTACAAGCCCC TGTCAGAAGACCATCGCCTAAGGGCTTAGATGCTACTACTTTTCAGAATATTCATGACTT TAATGAGCTGAGAGAGAGAG
	INTRON 5 - 6	10,126,480	10,127,422			943	GTGAGCATAAAGTTATAATTGTTCT..........CTTAGTTATGTAACTTTTGTGACAG
6	EXON 6	10,127,423	10,127,563	1	1	141	ATTCAGATACTCGAGTGGATCTGAGATTAATGTACCCAGATCCTCCCCGAGATCATCACA CCTTGGAGATTCAGCAGCAGGCCCTACTCCGAGAGCAGCAGAAGAGGCTTAATAGAATAA AGATGCGGAGAGATGCAGGAG
	INTRON 6 - 7	10,127,564	10,129,985			2,422	GTAAGTGCAAGCCTGGCTGCTTTAC..........CATTATTCTTTTGTTCTGTTTACAG
7	EXON 7	10,129,986	10,130,085	1	-	100	CTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGGTAAGCAACCAGT TCAAATTCCTCAGTTAGAATTTGCGGCCCATGTTAGTTAA
	INTRON 7 - 8	10,130,086	10,132,453			2,368	GTGAGTATTCCAGACTTTGAATATG..........ACAATTGTTGTTTTTTTTATTTTAG
8	EXON 8	10,132,454	10,132,517	-	-	64	CCCAGAGATGACACTAATGATTTTTTGAAAAATTCATTACTAGAATCTGATAGTGCTTTT ATTG
	INTRON 8 - 9	10,132,518	10,133,163			646	GTGAGTATATCTAATGTGATATTAA..........CATATTCTTTGTGTGGCCTGTTTAG
9	EXON 9	10,133,164	10,133,273	-	-	110	GTGCTTATGGTGAGACATATCCTGTTATTGAAGACAATGCCTTCCCTCCACCATCACAGC TGCCCTCTGCAAGGGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTT
	INTRON 9 - 10	10,133,274	10,134,091			818	GTATGTATGATCTTCTCAGTTTAGA..........CCTAAATTCTCTCTCTTAACTTTAG
10	EXON 10	10,134,092	10,134,173	-	-	82	GACGGTAGTCGGCTGCACACCCCACAAGATGGTCTCTCTTTAAAATCTATCTCCAGTGTA AATGTCGATCAAGTTAGAATGA
	3' upstream sequence						GAAATGAAGACAGAATGAGAAGACTGACTGAGCAGCAGAAGAAACCCACTAACACAGGTA CTTCCATACAAGATATCCACTGGCTGATGAAACACCTGCAGGGAAAAGAATTTTCAAGTC CTTTGAGTTTTACAAAAGGTCAAGGTCATAAACTAGCTTGGAAATCCAGGGCTTGGGATT AATTCTGCAGCAGGTTCTTCATACTAGGTGTTGGTTAAGAGTATTATCTATATCTAGGCT GTTTTCAGCAGGTTAAAGTGCTGACTAGTATGTTGGTAATCACTCACTGTTTTTAAGTAA TATATCTTTTAAAGACAATTTTACCTTTACTTGGCTTTTTGTGACATGAAGAAAAAAAGG TAGTTTTTCAGTTAATATTCTAAGCCAACAAGCTAATCTTCTCATGATGAGTGGTCTTGG GTGAAACTTCTCACAAAGCACAGGGCAGCTTCAGACCTCTCCTGCCAGCCTGTGCCACAC TCTCTTCCTTTCCTTCCTTTTCCTCTAAGTCAGGCTCTTAGTCCCTGGCTGGGACCATGG GCCAGAGTTGTGGCAGAGTTGCCTATCTTAGGTCTGTTAAGCTGCACTGCAGGATTTTCA TTGATGCAACTTTTTCTTAAATATTTCTTTCTTTTTTTTTTTTTTTTTAATTTTTTTTTT AATGTTTTTTTTTTTTTTTTGCTTGTTTGTTTGTTTGGTTTTTGGTTTTTCGAGACAGGG TTTCTCTGTATGGTCTTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAAC TCAGAAATCCGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACGC CCGGTTCTTAAATATTTCTTAATGCTACTTTTAAACTGAACTCATTTCTCCAGTCCAGGA GTGGTGTTTTGTGATAGTAAATATTTTTCACTAAATATGAAAAAACACAAAAACAATTAA GGAATGGTACTTTTCATGTCATAATTGAAATGTCTTAAAA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Cspp1 (ENSMUSG00000056763)
Transcript ID	ENSMUST00000187226

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 265 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information