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Target CDS Information

Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Cross Reference
EMBL AC123072, AC124386, AC127433
GO GO:0003779, GO:0005515, GO:0007010, ...show all
goslim_goa GO:0000902, GO:0003674, GO:0005575, ...show all
MGI_trans_name Dst-007
OTTP OTTMUSP00000068042
OTTT OTTMUST00000125613
UniParc UPI0004621154
Uniprot/SPTREMBL A0A087WRB8
Vega_transcript Dst-007, OTTMUST00000125613
Vega_translation 178900, OTTMUSP00000068042
Definition protein_id:ENSMUSP00000140560
translation:
MSSGNASYRCSMSSSADFSDEDDFSQKSGSASPAPGDTLPWNLPKHERSKRKIQGGSVLD
PAERAVLRIADERDKVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDT
LPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQIS
DIHVTGESEDMSAKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNAIIHKYRPDLIDM
NTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAFPKVPEG
GEGIGANDVEVKWIEYQNMVNYLIQWIRHHVVTMSERTFPNNPLELKALYNQYLQFKEKE
IPPKEMEKSKIKRLYKLLEIWIEFGRIKLLQGYHPNDIEKEWGKLIIAMLEREKALRPEV
ERLDMLQQIATRVQRDSVSCEDKLILARNALQSDSKRLESGVQFQNEAEIAGYILECENL
LRQHVIDVQILIDGKYYQADQLVQRVAKLRDEIMALRNECSSVYSKGRMLTTEQTKLMIS
GITQSLNSGFAQTLHPSLNSGLTQSLTPSLTSSSVTSGLSSGMTSRLTPSVTPVYAPGFP
SVVAPNFSLGVEPNSLQTLKLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQV
QLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRL
ESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSY
HAELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQH
IQENSAYFEFFNDAKEATDYLRNLKDAIQRKYSCDRSSSIHKLEDLVQESMEKEELLQYR
SVVAGLMGRAKTVVQLKPRNPDNPLKTSIPIKAICDYRQIEITIYKDDECVLANNSHRAK
WKVISPTGNEAMVPSVCFTVPPPNKEAVDFANRIEQQYQSVLTLWHESHINMKSVVSWHY
LVNEIDRIRASNVASIKTMLPGEHQQVLSNLQSRLEDFLEDSQESQIFSGSDISQLEKEV
SVCRKYYQELLKSAEREEQEESVYNLYISEVRNIRLRLESCEDRLIRQIRTPLERDDLHE
SMLRITEQEKLKKELDRLKDDLGTITNKCEEFFSQAADSPSVPALRSELSVVIQSLSQIY
SMSSTYIEKLKTVNLVLKNTQAAEALVKLYETKLCEEEAVIADKNNIENLMSTLKQWRSE
VDEKREVFHALEDELQKAKAISDEMFKTHKERDLDFDWHKEKADQLVERWQSVHVQIDNR
LRDLEGIGKSLKHYRDSYHPLDDWIQHIETTQRKIQENQPENSKALALQLNQQKMLVSEI
EVKQSKMDECQKYSEQYSAAVKDYELQTMTYRAMVESQQKSPVKRRRIQSSADLVIQEFM
DLRTRYTALVTLMTQYIKFAGDSLKRLEEEE

Chromosome 1
Length
Position(start - end)
168,788
34,006,006 - 34,174,795
Orient to Chromosome plus
Link Location : (1:34006006-34174795)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000187486
Reports
substitution
cSNPs15
Insertion115
Deletion158
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num13
non-synonymous num2
synonymous substitutions 34116141 (p.Arg129Arg), 34156837 (p.Ile398Ile), 34156903 (p.Val420Val), 34163258 (p.Thr588Thr), 34163261 (p.Pro589Pro), 34164102 (p.His737His), 34164114 (p.Leu741Leu), 34164174 (p.Ser761Ser), 34164189 (p.Asp766Asp), 34166290 (p.Leu886Leu), 34171196 (p.Ser1282Ser), 34172246 (p.Leu1341Leu), 34174123 (p.Glu1405Glu),
non-synonymous substitutions 34169888 (p.Leu1196Met), 34172272 (p.Thr1350Met),
B6 transcript
(ENSMUST00000187486)
MSSGNASYRCSMSSSADFSDEDDFSQKSGSASPAPGDTLPWNLPKHERSKRKIQGGSVLD
PAERAVLRIADERDKVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDT
LPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQIS
DIHVTGESEDMSAKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNAIIHKYRPDLIDM
NTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAFPKVPEG
GEGIGANDVEVKWIEYQNMVNYLIQWIRHHVVTMSERTFPNNPLELKALYNQYLQFKEKE
IPPKEMEKSKIKRLYKLLEIWIEFGRIKLLQGYHPNDIEKEWGKLIIAMLEREKALRPEV
ERLDMLQQIATRVQRDSVSCEDKLILARNALQSDSKRLESGVQFQNEAEIAGYILECENL
LRQHVIDVQILIDGKYYQADQLVQRVAKLRDEIMALRNECSSVYSKGRMLTTEQTKLMIS
GITQSLNSGFAQTLHPSLNSGLTQSLTPSLTSSSVTSGLSSGMTSRLTPSVTPVYAPGFP
SVVAPNFSLGVEPNSLQTLKLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQV
QLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRL
ESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSY
HAELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQH
IQENSAYFEFFNDAKEATDYLRNLKDAIQRKYSCDRSSSIHKLEDLVQESMEKEELLQYR
SVVAGLMGRAKTVVQLKPRNPDNPLKTSIPIKAICDYRQIEITIYKDDECVLANNSHRAK
WKVISPTGNEAMVPSVCFTVPPPNKEAVDFANRIEQQYQSVLTLWHESHINMKSVVSWHY
LVNEIDRIRASNVASIKTMLPGEHQQVLSNLQSRLEDFLEDSQESQIFSGSDISQLEKEV
SVCRKYYQELLKSAEREEQEESVYNLYISEVRNIRLRLESCEDRLIRQIRTPLERDDLHE
SMLRITEQEKLKKELDRLKDDLGTITNKCEEFFSQAADSPSVPALRSELSVVIQSLSQIY
SMSSTYIEKLKTVNLVLKNTQAAEALVKLYETKLCEEEAVIADKNNIENLMSTLKQWRSE
VDEKREVFHALEDELQKAKAISDEMFKTHKERDLDFDWHKEKADQLVERWQSVHVQIDNR
LRDLEGIGKSLKHYRDSYHPLDDWIQHIETTQRKIQENQPENSKALALQLNQQKMLVSEI
EVKQSKMDECQKYSEQYSAAVKDYELQTMTYRAMVESQQKSPVKRRRIQSSADLVIQEFM
DLRTRYTALVTLMTQYIKFAGDSLKRLEEEE
MSMv4 transcript
MSSGNASYRCSMSSSADFSDEDDFSQKSGSASPAPGDTLPWNLPKHERSKRKIQGGSVLD
PAERAVLRIADERDKVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDT
LPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQIS
DIHVTGESEDMSAKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNAIIHKYRPDLIDM
NTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAFPKVPEG
GEGIGANDVEVKWIEYQNMVNYLIQWIRHHVVTMSERTFPNNPLELKALYNQYLQFKEKE
IPPKEMEKSKIKRLYKLLEIWIEFGRIKLLQGYHPNDIEKEWGKLIIAMLEREKALRPEV
ERLDMLQQIATRVQRDSVSCEDKLILARNALQSDSKRLESGVQFQNEAEIAGYILECENL
LRQHVIDVQILIDGKYYQADQLVQRVAKLRDEIMALRNECSSVYSKGRMLTTEQTKLMIS
GITQSLNSGFAQTLHPSLNSGLTQSLTPSLTSSSVTSGLSSGMTSRLTPSVTPVYAPGFP
SVVAPNFSLGVEPNSLQTLKLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQV
QLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRL
ESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSY
HAELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQH
IQENSAYFEFFNDAKEATDYLRNLKDAIQRKYSCDRSSSIHKLEDLVQESMEKEELLQYR
SVVAGLMGRAKTVVQLKPRNPDNPLKTSIPIKAICDYRQIEITIYKDDECVLANNSHRAK
WKVISPTGNEAMVPSVCFTVPPPNKEAVDFANRIEQQYQSVLTLWHESHINMKSVVSWHY
LVNEIDRIRASNVASIKTMLPGEHQQVLSNLQSRLEDFLEDSQESQIFSGSDISQLEKEV
SVCRKYYQELLKSAEREEQEESVYNLYISEVRNIRLRLESCEDRLIRQIRTPLERDDLHE
SMLRITEQEKLKKELDRLKDDLGTITNKCEEFFSQAADSPSVPALRSELSVVIQSMSQIY
SMSSTYIEKLKTVNLVLKNTQAAEALVKLYETKLCEEEAVIADKNNIENLMSTLKQWRSE
VDEKREVFHALEDELQKAKAISDEMFKTHKERDLDFDWHKEKADQLVERWQSVHVQIDNR
LRDLEGIGKSLKHYRDSYHPLDDWIQHIEMTQRKIQENQPENSKALALQLNQQKMLVSEI
EVKQSKMDECQKYSEQYSAAVKDYELQTMTYRAMVESQQKSPVKRRRIQSSADLVIQEFM
DLRTRYTALVTLMTQYIKFAGDSLKRLEEEE
homology99.86 (1471 / 1471)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000187486
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CAGTGGCGAAGTCAGTGGTCCTGACTGGTGACAGTCTGTCTGACAAGCCG
CATGTGAGTCCTGTGGGAGTTGCACACACAGCCTGTTGGTGCTGCAGGTACCAGTGTGAG
TAGCTCACTGTTATTACTTCAAATTGGAGCTTGTCTCATTGAGCTGATTTCTGCCTGCAG
CTTGCTGCTTGGGGAATCCATGGCTGTAGCTTCCATCTCAAGGAATTCGAATTCAAGTTA
TGTTAGTTTGGCTTCTTCACTGTGAGCCTGGGCAAGTGAAGACTTCCCTTTGATACTCTT
CAGAATTCTTAATCCAGTCTATAGCATCTCTTCCTTGCTGAGGTGTGGGCTGTCTAAATA
CTCACAGACACAACCCAATAAGAGGGAAGGAATAAGACCATGTGCCTTTTATGAAAACAT
TATGACCCCGAGGATTCTAAGCGCCTGCAGGATCCAGGAAGAGTAACCTTCAGGCAGAGT
GGTTTTGGTAAAAGTCTGTGTTTCTCATCTTCCTGATGGCTGCAGCTGAGGAGAACTTGG
CTTCCTGTCCCCGCACTGTGTCCTCATTTACATTATTGGCAGCCCTTCGCTGCTGGAAGT
TTAAATTATCTCAAGAACTCTAAACTGAGTTCAGATGTTTGTTTATTGGCGTTGCCTTCG
GCCTTTGAAAGCAGGCTTTTGTGTTCTCCCGGTCTTAAGAAAAGGCTCTTCTCAGAATCA
GCCCTCCCTCCCTCCCTCCTCACCCTTTTCTGGGAACCCGCTTCAGTCTCATGCAGAAAA
TTAAATACAGGGCTCAAAACTGGTTAAAAGGAGGCTCCAGTGGCCCCGGCGGCTTGAAAC
GGGAAGGAGGTGGGACCCAGCATCCTGTATTTGTGCTGTGTTTATGAAACTTAAAGTTAG
TTGCATTAATGAATTAACCAGAAGGCTAGTAATGGAAAATGTTTCTCCTGTCCTGGTGGG
GGAGCCAGATACTGTAGATTTGTCACAGGAAGGCTGTTGATTCTGGCTTC
1 EXON 1 34,005,880 34,006,008 - 0 129
ATTGTTGGCCCAGTCATTTGTTGAGCCGGTGGCTGGAGCGCAGGCCACACACTTCTTCCT
TCTGGTCTCCATGTATTGGAACAGCTTGCTTATTGTTTCTACGGGAGCAGACTTGGCCAA
GAAGATATG
INTRON 1 - 2 34,006,009 34,006,190 182
GTGAGCCCTGGGGTTCGTTTTGTTT..........GCTTCTCCTGTGTCATCCTCCTCAG
2 EXON 2 34,006,191 34,006,398 0 1 208
AGCTCCGGGAACGCGTCCTACCGCTGTTCTATGTCCTCCTCTGCGGATTTTTCTGACGAG
GATGATTTCAGCCAGAAATCTGGCTCAGCATCTCCGGCTCCTGGAGACACCTTACCCTGG
AATTTGCCCAAGCATGAGAGATCCAAAAGAAAGATTCAAGGGGGCTCGGTGCTGGACCCA
GCCGAGAGGGCTGTGCTTCGGATAGCAG
INTRON 2 - 3 34,006,399 34,086,241 79,843
GTGAGTGGGGGAGGGGATGGAGTGG..........TTATGTTTGTTTGTTTGTTTTCCAG
3 EXON 3 34,086,242 34,086,303 1 0 62
ATGAGCGGGACAAAGTTCAAAAGAAAACATTTACAAAATGGATAAATCAGCATCTCATGA
AG
INTRON 3 - 4 34,086,304 34,113,932 27,629
GTGAGTCGCTCGCTTGCTCACTCGC..........AAAGATGGCCGCTTTGTCGCCGTAG
4 EXON 4 34,113,933 34,114,022 0 0 90
GTTCGGAAGCACGTGAACGATCTCTACGAGGATCTGAGGGACGGGCACAATTTGATCTCC
CTCCTGGAGGTTCTGTCTGGAGACACCTTG
INTRON 4 - 5 34,114,023 34,116,117 2,095
GTAAGTGTGCGCTTTCCTGATTTCT..........CACACCTTCCATTTTCTGTCCTTAG
5 EXON 5 34,116,118 34,116,195 0 0 78
CCCCGGGAGAAGGGTCGGATGCGCTTTCACAGGCTACAGAACGTACAGATTGCACTCGAC
TATTTGAAAAGACGCCAG
INTRON 5 - 6 34,116,196 34,117,431 1,236
GTATGAGATTTTTCAGACTCTAGCG..........GTTTCTCTCTCTCACCTACAAACAG
6 EXON 6 34,117,432 34,117,524 0 0 93
GTGAAGTTGGTGAACATCAGAAATGATGACATAACAGATGGAAATCCTAAGCTGACTTTG
GGGTTAATATGGACAATAATTCTGCACTTTCAG
INTRON 6 - 7 34,117,525 34,135,089 17,565
GTGAGTCCACTTTGTCTTTGTTGCC..........GGTCTGATGCTTCCGTTATATTTAG
7 EXON 7 34,135,090 34,135,256 0 2 167
ATATCTGACATCCATGTCACTGGAGAGTCAGAGGACATGTCTGCGAAAGAAAGGCTGCTC
CTGTGGACACAGCAGGCGACAGAAGGCTATGCTGGGGTGCGGTGTGAAAACTTCACTACC
TGCTGGAGAGATGGGAAACTATTCAATGCCATCATTCATAAATACAG
INTRON 7 - 8 34,135,257 34,152,201 16,945
GTACAGAATGTGTCCGGCCTTGTCG..........CTTAACACGGTGCACTTTTTCCTAG
8 EXON 8 34,152,202 34,152,314 2 1 113
GCCGGACCTGATAGACATGAATACTGTTGCTGTTCAAAGCAACCTTGCAAATTTAGAGCA
TGCTTTTTATGTAGCTGAAAAAATCGGTGTTATCAGACTTCTGGACCCTGAAG
INTRON 8 - 9 34,152,315 34,152,412 98
GTGAGTTGTCTTCTTGACTCTTACC..........AACTCATCTCTGTTGCTGCTTGTAG
9 EXON 9 34,152,413 34,152,519 1 0 107
ATGTCGACGTCTCTTCCCCGGACGAGAAGTCGGTGATAACCTATGTGTCCTCCCTTTATG
ATGCCTTTCCCAAAGTCCCCGAAGGTGGCGAAGGCATTGGTGCAAAC
INTRON 9 - 10 34,152,520 34,154,512 1,993
GTGAGTGTTGCCTTTTCTGCGCTTG..........GCTTTCCTGCTGTTTTGTCATCTAG
10 EXON 10 34,154,513 34,154,632 0 0 120
GATGTTGAAGTCAAATGGATTGAATACCAGAATATGGTGAACTACCTCATCCAGTGGATT
AGACACCACGTGGTCACTATGTCCGAGAGAACATTTCCTAACAACCCTCTAGAACTAAAG
INTRON 10 - 11 34,154,633 34,156,598 1,966
GTTGGTATATCACCGACATCCCGAG..........TAATTCATTTCCCTTTCCATTGTAG
11 EXON 11 34,156,599 34,156,694 0 0 96
GCACTTTATAATCAGTATTTACAGTTCAAAGAGAAAGAAATCCCACCAAAGGAGATGGAG
AAATCAAAAATTAAACGACTGTATAAATTATTAGAG
INTRON 11 - 12 34,156,695 34,156,780 86
GTGAGCCAAGTACTGTTCGGTACTT..........ACATTAGTTCTCTTGTTCCCTTAAG
12 EXON 12 34,156,781 34,156,908 0 2 128
ATCTGGATCGAGTTTGGGCGCATCAAACTCCTTCAAGGTTATCATCCGAACGACATTGAG
AAGGAGTGGGGCAAACTCATCATCGCCATGCTTGAGCGGGAGAAGGCACTACGTCCCGAG
GTGGAGAG
INTRON 12 - 13 34,156,909 34,160,619 3,711
GTAGGGATGCTGTCCTAGACCGGAG..........TCTCTTTTCCCTTTGACCCTTTTAG
13 EXON 13 34,160,620 34,160,713 2 0 94
GTTGGATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGGATAGTGTCAGCTGCGAAGA
CAAACTCATCCTCGCCCGAAATGCTCTCCAGTCT
INTRON 13 - 14 34,160,714 34,161,003 290
GTAAGTCGACTTCAAGGGCTAGGGC..........TAATGCCGAGTTCTTTTAAATATAG
14 EXON 14 34,161,004 34,161,158 0 2 155
GATTCCAAAAGATTAGAGTCGGGAGTCCAGTTTCAGAATGAAGCAGAGATTGCCGGGTAC
ATACTTGAATGTGAGAACCTTTTACGCCAGCATGTGATTGATGTACAGATTCTGATAGAT
GGGAAATACTACCAGGCCGATCAGCTGGTGCAGAG
INTRON 14 - 15 34,161,159 34,163,008 1,850
GTAGGAGCAATCCTTAGTTCTTCTT..........TCACATGCCTCTGTGTTCTTCCCAG
15 EXON 15 34,163,009 34,163,471 2 0 463
GGTTGCAAAGCTGCGTGATGAGATTATGGCCTTAAGGAACGAATGTTCTTCGGTGTACAG
CAAAGGACGCATGCTGACCACGGAACAGACCAAGCTCATGATATCAGGAATCACTCAAAG
CTTAAACTCAGGATTTGCACAAACCTTACACCCCAGCCTGAACTCAGGGCTAACCCAGAG
TTTAACCCCTTCCTTGACGTCTTCTAGCGTGACTTCTGGCTTGTCGTCCGGGATGACTTC
CCGCCTGACGCCGTCAGTTACTCCGGTGTATGCACCTGGGTTCCCTTCAGTTGTAGCTCC
AAACTTCAGTTTAGGGGTAGAGCCAAATTCATTACAGACTCTGAAGCTAATGCAGATCCG
AAAGCCCCTTCTCAAGTCGTCTTTGCTGGATCAGAACTTGACAGAAGAGGAAGTCAATAT
GAAATTTGTTCAAGATCTCTTGAACTGGGTTGATGAGATGCAG
INTRON 15 - 16 34,163,472 34,163,625 154
GTAATGTTTATCTCAGTTGTCCAGT..........GTTAATCATTATTTTACTCTTTTAG
16 EXON 16 34,163,626 34,163,754 0 0 129
GTGCAGCTGGACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTTGAAAGCCATTTAGAA
AACCATAAAAATGTTCACCGAGCCATTGAAGAATTTGAATCCAGCCTTAAGGAAGCTAAA
ATTAGTGAG
INTRON 16 - 17 34,163,755 34,163,896 142
GTATATGAATTTTTGTGCTTTTAAA..........CCATGCCTTTGCTTCCATATTTTAG
17 EXON 17 34,163,897 34,163,974 0 0 78
ATTCAGATGACAGCGCCTCTGAAACTCTCTTACACAGATAAGTTGCACAGATTAGAGAGT
CAGTACGCTAAACTCTTG
INTRON 17 - 18 34,163,975 34,164,075 101
GTAAGTATTTCCTTTTTCTTTTTAA..........CTTACAATGGGTTTTCCTTAAAAAG
18 EXON 18 34,164,076 34,164,237 0 0 162
AATACATCCAGAAATCAGGAGCGACACCTCGATACACTGCACAACTTTGTAACCCGCGCA
ACTAACGAGCTTATCTGGTTGAATGAAAAGGAGGAGTCTGAAGTTGCTTATGACTGGAGT
GAGAGAAACAGCAGTGTCGCCCGGAAGAAAAGCTACCACGCG
INTRON 18 - 19 34,164,238 34,164,326 89
GTGAGTCGGCTGCGCTTGGCTCAGG..........ACGCTTCCTGATGCTTCCTCGCTAG
19 EXON 19 34,164,327 34,164,431 0 0 105
GAGCTGATGCGGGAGCTGGAGCAGAAGGAGGAGAGCATTAAAGCTGTTCAGGAGATCGCA
GAGCAGCTGCTTCTGGAAAACCACCCAGCCCGCTTGACCATCGAG
INTRON 19 - 20 34,164,432 34,165,057 626
GTAAGAAAGGTCGAGGCGTGGGCTG..........GCTTTCACTGTGTCTCCTCCCTCAG
20 EXON 20 34,165,058 34,165,153 0 0 96
GCGTACAGAGCGGCCATGCAGACACAGTGGAGCTGGATCCTACAGCTGTGCCAGTGCGTG
GAGCAGCACATTCAGGAGAACTCTGCCTATTTCGAG
INTRON 20 - 21 34,165,154 34,166,179 1,026
GTACGTTGGTAGAGTCACAGCGTGA..........CAGCTGCCAAGTTTTCTCTCTTTAG
21 EXON 21 34,166,180 34,166,305 0 0 126
TTTTTCAATGATGCCAAAGAAGCCACTGATTACCTAAGGAATCTGAAAGATGCCATCCAG
CGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTCGTCCAGGAG
TCCATG
INTRON 21 - 22 34,166,306 34,166,941 636
GTAAGGATGCAGAAACTCTGGGCTT..........TCCCGCCGTGTTTGCTGCCTAGGAG
22 EXON 22 34,166,942 34,167,091 0 0 150
GAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGGTGGCAGGGCTGATGGGGCGAGCGAAG
ACAGTGGTGCAGCTGAAGCCGAGGAATCCTGACAACCCACTCAAGACGTCCATCCCCATC
AAAGCCATCTGCGACTACAGACAGATTGAG
INTRON 22 - 23 34,167,092 34,167,275 184
GTACCTGTAATTCTCAAAGCAGACT..........TTTCCTTTCTTCCATTTTAAACCAG
23 EXON 23 34,167,276 34,167,430 0 2 155
ATAACCATTTACAAAGACGATGAGTGTGTCTTGGCAAACAACTCTCATCGAGCTAAATGG
AAGGTCATCAGTCCTACTGGGAACGAGGCCATGGTCCCGTCTGTGTGCTTTACTGTTCCC
CCACCAAACAAAGAAGCAGTTGACTTTGCCAACAG
INTRON 23 - 24 34,167,431 34,167,610 180
GTTTGTATGGTTTGGGGCCTTTCTG..........CTGTCTTCTCGTGTGTGTATTCCAG
24 EXON 24 34,167,611 34,167,737 2 0 127
AATTGAGCAACAGTATCAGAGTGTACTCACTCTCTGGCATGAGTCTCACATAAACATGAA
GAGTGTCGTCTCCTGGCACTATCTAGTCAATGAAATCGACAGAATTCGAGCTAGTAATGT
GGCTTCG
INTRON 24 - 25 34,167,738 34,167,822 85
GTGAGTGTGACATCATTTACGAGCC..........TAATCCAAGGATCCCTGTTCTTTAG
25 EXON 25 34,167,823 34,168,006 0 1 184
ATAAAGACGATGTTGCCTGGCGAGCACCAGCAGGTTCTCAGTAATCTCCAGTCCCGCTTG
GAGGATTTCCTGGAGGATAGCCAGGAATCCCAGATATTCTCAGGCTCGGATATAAGTCAA
CTAGAAAAGGAAGTGAGTGTGTGCAGGAAGTATTATCAAGAGCTCCTCAAGTCTGCAGAA
AGAG
INTRON 25 - 26 34,168,007 34,169,163 1,157
GTAAGGCATGGGGTTGCTGGGTTTC..........ATTTACACAGTGTGTCCTTCCACAG
26 EXON 26 34,169,164 34,169,321 1 0 158
AGGAGCAAGAGGAATCTGTGTATAATCTTTACATCTCGGAAGTGCGAAACATTCGGCTCC
GCCTGGAGAGCTGTGAAGACAGGTTGATTCGGCAGATCCGGACTCCCCTGGAAAGAGATG
ATTTACATGAAAGCATGCTCAGGATCACGGAGCAGGAG
INTRON 26 - 27 34,169,322 34,169,749 428
GTAAGAGTTACACACGTGTTAGCAA..........AACCTCCGTTTGTTTTCTGTACTAG
27 EXON 27 34,169,750 34,169,928 0 2 179
AAACTGAAGAAAGAGCTGGATCGGCTTAAAGATGACTTGGGAACGATCACAAATAAGTGT
GAAGAGTTTTTCAGCCAAGCGGCTGACTCGCCGTCTGTCCCCGCTCTCCGATCAGAGCTC
AGCGTGGTCATTCAGAGCATGAGTCAGATCTACTCTATGTCTTCCACGTACATAGAGAA
INTRON 27 - 28 34,169,929 34,170,359 431
GTATGGCAGCACTCAGTCCTCACCC..........AACTAGTATTTATTTCTCCTTAAAG
28 EXON 28 34,170,360 34,170,498 2 0 139
ATTGAAGACTGTGAATTTGGTTTTAAAAAACACTCAAGCTGCAGAAGCCCTTGTCAAACT
CTACGAAACCAAACTGTGTGAAGAGGAAGCAGTTATAGCAGACAAGAATAACATTGAGAA
TTTAATGAGTACTTTAAAG
INTRON 28 - 29 34,170,499 34,171,115 617
GTAAGAGTCTCACTTCTGACCGCGG..........ATGTCCATTGATTCATGTATTTCAG
29 EXON 29 34,171,116 34,171,309 0 2 194
CAATGGCGATCAGAAGTAGATGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGAGTTG
CAGAAAGCAAAAGCCATCAGTGATGAGATGTTCAAGACACACAAAGAACGGGACCTTGAC
TTTGACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAAAGGTGGCAGAGCGTTCACGTC
CAGATCGACAACAG
INTRON 29 - 30 34,171,310 34,172,182 873
GTGGGTCACCTTTCTGTTCAGTGCA..........GACTATTCCATTGCTGTTCTTGTAG
30 EXON 30 34,172,183 34,172,345 2 0 163
GCTCCGGGACTTAGAAGGAATCGGGAAGTCCCTGAAGCACTACAGGGACTCCTACCACCC
TCTTGATGACTGGATCCAGCACATTGAAATGACCCAGAGAAAAATTCAGGAAAATCAGCC
AGAAAACAGCAAAGCCCTGGCCCTGCAGCTGAACCAACAGAAG
INTRON 30 - 31 34,172,346 34,173,001 656
GTACTTGAAACTGAGAGTCTGTCTG..........TCCTCTCTAAACTCTGCGTTTACAG
31 EXON 31 34,173,002 34,173,085 0 0 84
ATGCTGGTGTCTGAAATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTCAGAAATACTCA
GAGCAGTACTCGGCTGCCGTCAAG
INTRON 31 - 32 34,173,086 34,174,114 1,029
GTGAGGACAGACAAATAGCTATATA..........TTATCTCATTGGTTCTTTCATGCAG
32 EXON 32 34,174,115 34,174,222 0 0 108
GACTATGAATTGCAAACAATGACCTACAGGGCTATGGTGGAGTCCCAGCAGAAGTCGCCA
GTGAAGCGACGGCGGATACAGAGCTCAGCAGACCTCGTTATTCAAGAG
INTRON 32 - 33 34,174,223 34,174,696 474
GTAACAAACACAGAAGGGCAGAGGA..........ACGCTCTCTCACTTCTCCCTTGCAG
33 EXON 33 34,174,697 34,174,795 0 - 99
TTCATGGACCTACGGACACGGTACACTGCCCTGGTCACTCTTATGACGCAGTATATTAAA
TTTGCTGGTGATTCGTTGAAAAGGCTGGAAGAGGAGGAG
3' upstream sequence
GTAACCGTTAACATGTTACATCCGTGTGAACAGGGACTAGGTTTGAGCCGAAACTGTAAT
GCTTTGGGAAGGAAAAATAAGCTTCGTGATGAATTTACATGGCTGATTGCTAACATGCAA
GTCGTTAATTAGTAGCTTAACCTGGAAGAGACGGAAAGCCTTGGACGTTTGTTTGGGTTT
TCGAGTCTCCAAAACAGAAAAACATTTTTGTAAAAGATTTATTTATTTATTTATTTATTT
ATTTATTGTAAGTACACTGTAGCTATCTTCAGAAGACCAGAAGAGGGCGACGGATCTCAT
TATGGATGGCTATGAGCCACCACGTGGTTGCTGGAATTTGACCTCAGAACCTTCAGAAGA
GCAGTCATTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCCAGAAAAGCATTTTTAAAGC
TTTACTTCAGGAGGACTGGAGTATCGGCTTAGTGTACTTTAGTCATGGGTTTGATCCCCA
AGCCTCAAAAGCAGCTACTTCAGCACCAGTGTGGTAGAATCAGTGTCATCCACAGTGCTG
GGTCAGCGGGAACATTTGGGCAGAAGCGGCTTGAGCTTCTTCACATCTGAGTTTCTATCA
AGTGCAGATGCTGCTCATAGGAAGTCTGTAGAGAACTTCCACGCACACACACCTCCGTTA
CGCATCTTAAATTGACATACATTGTTTAAAAGTTAAATTAAAATCAGCTGTATTAAAAAG
ACACACTTAATAGTAGATATTTGTGCAAAAGAATGGGCTTAAGAAATGTGGAACTTTAAG
CTTTGCATTTTTGCCAAAAAATTCTATGTGTTAAGAAGAGTAAACCTCTTTCTGATACAA
AGGATATTTGCAGCTTTGATCCTGAACTTAGAATTGTGCTGCGAAACAGGAAGAGTAAGA
AATTACTTGTAGCCGGGCGGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGA
GGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACA..........

Sequence Detail Report

Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000187486
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1471 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information