|
|
5' upstream sequence
|
|
|
|
|
|
..........ACCGTCTACTTCCTGTATAATCCTATATATTTCATCTTATGCATTTAAAG
ACATCTCTGTGGTAAGGTGTCTTGAGTTTGTCAATGGGATAATTAAGATTACTCTGGGCG
CCTTCTCGCTGCTGGGACTTTTGGAGTAGACACAGCAGTCGCTGCCACTAAAGAGAAGAA
TTACCACACTTATGGCTGTGGTTCGGTGCTCAGTATTTCAGAGGCCTCCAGGCAGGCTAC
ACACTGAAAAAACGTGCAGAATCTCTCACTGGTACAGAGTAGATTTGTCACAAATAGTAA
AATATTAATTCACCCCCACAATATTCTTAATTATGAATGTTGGCAACCTTTGTTACTGGA
TAATCTGTGTAGTTTAAATTTCAAATGCCATTTACGATTGCTGTCACTGTGCATCCTAAT
GGGAAAAAAACCCCGCAAACTATGGCTCGGTAACTGTGTTACAAAGAGGAACTTCACTGG
AGAAAAGGCAGGTATTTTTCTGAAATTCCGGATGCCAAGGGTAAGTAAGCCACGAAGGCA
GGAGGGAGCTCATTTCTGTCACGTGCTTTGCTTTGGGGACTCTGGCGACAAAACAGCCGA
CAACCCACTTCCTGTTGACTAAACAGCACCTCACCCTGCCAGAAAGGCCGGGCCGCTAAA
TCTGAGACTTCCGCGCTCGACTTTACAGGCTTCCGGTCCGCAGCGGGTTAAGCCAACCTC
GGCGGCGTCGCGAGGATCCCACGCCTCAGGCAGACAGCCCGTTCCTCTCGCTGCTTCTCA
CGGAGAGTGACAGCTCGGAAGGCAAGAACCTCCCTCCAGTGCGTTGTCATCCGCAGCAGC
GCACACTCCGTTCCAGCTCTGCAGCCTGGGTAACATTCCCTCGTCGTGACTCGTAGCGGC
GCCGTTAGCTTACGTTGAAGCGTATGATTGGCTAGACACCTCTGACCCCACACGATTGGG
TACTGGTGGCCAGGCTCCGCCCCTTCCCCACCTCCGTCCCGCGGTAGCCG
|
|
1
|
EXON 1
|
43,934,015
|
43,934,253
|
- |
0 |
239
|
GGTGTCCTCGCGCCGCTCGTCCGCGCGCTGCCTGGCAGTTTGCCTCTTCCTCGTCTGTCC TCCAGCTTGCGTCCATGGCCACCGCCGCGACCGAGGAGCCCTTTCCTTTCCACGGTCTTC TACCAAAGAAGGAGACCGGGGCCTCCTCCTTTCTGTGCCGCTACCCGGAGTATGACGGGC GCGGGGTGCTCATCGCCGTCCTGGACACAGGGGTTGATCCCGGGGCCCCGGGCATGCAG
|
|
|
INTRON 1 - 2
|
43,934,254
|
43,940,109
|
|
|
5,856
|
GTGAGGCGGCGCCCAAGGGCCCGTA..........ATATTTTATTTGCCTCAATTTTTAG |
|
2
|
EXON 2
|
43,940,110
|
43,940,238
|
0 |
0 |
129
|
GTTACAACTGATGGAAAACCAAAAATCATTGATATCATTGATACAACAGGAAGTGGTGAT GTAAATACTGCTACAGAAGTAGAACCAAAAGATGGTGAAATTATTGGTCTTTCTGGAAGA GTGCTTAAG
|
|
|
INTRON 2 - 3
|
43,940,239
|
43,949,311
|
|
|
9,073
|
GTTGGAACATTTCTCTTCTTACCGA..........AGTGAACAATTTGTTTTACCTACAG |
|
3
|
EXON 3
|
43,949,312
|
43,949,407
|
0 |
0 |
96
|
ATTCCTGCAAACTGGACAAATCCTTTAGGAAAATATCATATTGGCATTAAAAATGGTTAT GACTTCTATCCAAAGGCTCTCAAGGAAAGGATACAG
|
|
|
INTRON 3 - 4
|
43,949,408
|
43,951,106
|
|
|
1,699
|
GTAATGACATTCATTATCAGCTTGC..........TGGGGTGATTTTTTTATCTTTGCAG |
|
4
|
EXON 4
|
43,951,107
|
43,951,211
|
0 |
0 |
105
|
AAAGAACGGAAGGAAAAAATCTGGGATCCAATTCACAGAGTTGCACTTGCAGAAGCTTGT AGAAAACAAGAAGAATTTGATATTGCCAACAATGGCTCTTCCCAA
|
|
|
INTRON 4 - 5
|
43,951,212
|
43,953,256
|
|
|
2,045
|
GTTGGTGCTACTCATTTCTGTTTAC..........TGTTAATCTGTTTTCTGACTAATAG |
|
5
|
EXON 5
|
43,953,257
|
43,953,381
|
0 |
2 |
125
|
GCCAATAAACTAATCAAGGAAGAGTTGCAAAGTCAAGTGGAATTACTTAATTCTTTTGAG AAAAAGTATAGTGATCCAGGCCCTGTATATGACTGCTTGGTGTGGCATGATGGTGAGACC TGGAG
|
|
|
INTRON 5 - 6
|
43,953,382
|
43,954,576
|
|
|
1,195
|
GTAATCTCAAGTATTCTGTAGATCT..........AATGCCTATTTCTCCTTCCCAACAG |
|
6
|
EXON 6
|
43,954,577
|
43,954,740
|
2 |
1 |
164
|
AGCCTGTGTTGATTCGAATGAGAATGGGGACTTGAGTAAATGTGCCGTATTGAGAAACTA CAAAGAGGCCCAAGAGTACAGTTCTTTTGGCACAGCTGAGATGCTGAATTACTCTGTGAA CATTTATGACGATGGGAACCTGCTCTCCATTGTGACCAGCGGAG
|
|
|
INTRON 6 - 7
|
43,954,741
|
43,956,470
|
|
|
1,730
|
GTATCTGTCTCAAATTTACTAGTGA..........ACTAACACCCTATTTCTGTTTATAG |
|
7
|
EXON 7
|
43,956,471
|
43,956,625
|
1 |
0 |
155
|
GAGCTCATGGAACCCATGTAGCAAGTATAGCCGCAGGGCATTTTCCAGAAGAGCCTGAAC GGAATGGAGTTGCTCCTGGTGCTCAAATTCTATCCATTAAGATTGGTGATACACGGCTAA GCACTATGGAAACAGGCACAGGCCTCATCAGAGCT
|
|
|
INTRON 7 - 8
|
43,956,626
|
43,957,435
|
|
|
810
|
GTGAGTGTCTAGGAGTTCTTGCTAT..........AACCAGAGTCTTAATCTTTTAATAG |
|
8
|
EXON 8
|
43,957,436
|
43,957,512
|
0 |
2 |
77
|
ATGATAGAAGTTATAAATCATAAGTGTGATCTTGTCAACTACAGTTATGGAGAAGCAACT CATTGGCCAAATTCTGG
|
|
|
INTRON 8 - 9
|
43,957,513
|
43,960,083
|
|
|
2,571
|
GTAAGTATTTTGTGGGGGTGGGAGT..........CTCAAAGTAATTCTTTCTTTTTCAG |
|
9
|
EXON 9
|
43,960,084
|
43,960,211
|
2 |
1 |
128
|
GAGAATTTGTGAAGTAATTAATGAAGCAGTATGGAAACATAATACAATTTATGTTTCTAG TGCTGGAAATAATGGTCCATGCCTTTCTACAGTGGGTTGTCCAGGAGGAACTACATCCAG TGTGATAG
|
|
|
INTRON 9 - 10
|
43,960,212
|
43,960,867
|
|
|
656
|
GTTAGTAAGCTTTAAATACAAGCAA..........TTAATGGCAAAATCCATCCTAATAG |
|
10
|
EXON 10
|
43,960,868
|
43,960,967
|
1 |
2 |
100
|
GTGTTGGAGCTTATGTTTCCCCTGATATGATGGTTGCAGAGTATTCACTGAGAGAGAAAC TGCCTGCAAATCAATATACATGGTCTTCTAGAGGCCCAAG
|
|
|
INTRON 10 - 11
|
43,960,968
|
43,968,881
|
|
|
7,914
|
GTAAGTATAAGTAATTATTGGGAGT..........CTACCCTCACCTTTTTTCTGTTTAG |
|
11
|
EXON 11
|
43,968,882
|
43,969,030
|
2 |
1 |
149
|
TGCTGATGGAGCCCTCGGTGTGAGCATCAGTGCACCAGGAGGTGCTATTGCTTCTGTGCC TAACTGGACATTGAGGGGGACTCAGCTAATGAATGGGACATCAATGTCTTCCCCCAATGC CTGTGGTGGCATTGCCCTGGTACTTTCAG
|
|
|
INTRON 11 - 12
|
43,969,031
|
43,970,400
|
|
|
1,370
|
GTAAGGATATTACATACTACTCTCT..........TAGGTGTTTGTTTGTTTGTTTTTAG |
|
12
|
EXON 12
|
43,970,401
|
43,970,516
|
1 |
0 |
116
|
GGCTGAAAGCAAATAATGTTGACTATACTGTACACTCAGTCAGAAGAGCTCTAGAAAATA CTGCAATAAAAGCTGACAATATAGAAGTATTTGCCCAAGGACATGGAATTATTCAG
|
|
|
INTRON 12 - 13
|
43,970,517
|
43,971,563
|
|
|
1,047
|
GTACTTGTTGTCTGTGTACTAAAAT..........CATGCTACCATTTATATTCTTTTAG |
|
13
|
EXON 13
|
43,971,564
|
43,971,732
|
0 |
1 |
169
|
GTTGACAAAGCTTATGACTACCTCATTCAAAATACATCATTTGCTAACAGATTAGGTTTT ACAGTTACTGTTGGAAATAACCGTGGTATCTACCTCCGAGATCCTGTCCAGGTGGCTGCT CCTTCAGATCATGGTGTTGGCATTGAGCCTGTATTTCCAGAGAACACAG
|
|
|
INTRON 13 - 14
|
43,971,733
|
43,972,529
|
|
|
797
|
GTAAGTACTAGGGTGGCAGTAAGCA..........TTAATTTTTTTTTTTTTAATGCCAG |
|
14
|
EXON 14
|
43,972,530
|
43,972,687
|
1 |
0 |
158
|
AAAACTCTGAAAAAATATCCTTTCAGCTTCATTTAGCTTTAACTTCAAATTCATCTTGGG TTCAGTGTCCCAGCCATTTGGAACTCATGAATCAGTGTCGGCACATAAACATACGTGTGG ACCCCAGGGGCTTAAGAGAAGGGTTACATTATACAGAG
|
|
|
INTRON 14 - 15
|
43,972,688
|
43,973,443
|
|
|
756
|
GTATTGTAACATCTATTGTTTTTCT..........TGAAACTTACCATTCTTTCTTCAAG |
|
15
|
EXON 15
|
43,973,444
|
43,973,520
|
0 |
2 |
77
|
GTATGTGGCTATGATATAGCATCCCCCAATGCAGGTCCTTTATTCAGAGTTCCAATCACT GCAGTTATAGCAGCAAA
|
|
|
INTRON 15 - 16
|
43,973,521
|
43,975,415
|
|
|
1,895
|
GTAAGTAAGATGTTTAGTTTATTAT..........TAATTTTTTTTTTTTTAATTTTCAG |
|
16
|
EXON 16
|
43,975,416
|
43,975,522
|
2 |
1 |
107
|
AGTAAATGAGTCATCACATTATGATCTAGCCTTTACAGATGTACATTTTAAACCTGGTCA GATTCGAAGACATTTTGTTGAGGTTCCTGAGGGGGCAACCTGGGCTG
|
|
|
INTRON 16 - 17
|
43,975,523
|
43,977,206
|
|
|
1,684
|
GTAAGTAAAATTTGTTTCTTATCTT..........TTAAAATTTAATTTCTTTATTTTAG |
|
17
|
EXON 17
|
43,977,207
|
43,977,361
|
1 |
0 |
155
|
AAGTTACCGTGTGTTCATGTTCTTCTGAGGTATCGGCAAAATTTGTTCTTCATGCAGTAC AGCTTGTGAAGCAGAGAGCATATCGAAGTCATGAATTTTATAAGTTTTGTTCCCTTCCAG AAAAAGGAACACTTATTGAAGCTTTTCCTGTTTTG
|
|
|
INTRON 17 - 18
|
43,977,362
|
43,978,412
|
|
|
1,051
|
GTAAGTTTATGTAACAAGAAAATCG..........TTAACATTCTCATTTTTATTTCCAG |
|
18
|
EXON 18
|
43,978,413
|
43,978,529
|
0 |
0 |
117
|
GGCGGAAAAGCAATTGAATTTTGTATTGCTCGTTGGTGGGCAAGTCTTAGTGATGTCAAT ATTGATTATACCATATCATTCCATGGGATAGTGTGTACTGCACCACAGTTAAACATT
|
|
|
INTRON 18 - 19
|
43,978,530
|
43,978,734
|
|
|
205
|
GTAAGTGCTATAACATTCTCATTAT..........ATTAATTTTTAAATATGTTTTGTAG |
|
19
|
EXON 19
|
43,978,735
|
43,978,835
|
0 |
2 |
101
|
CATGCATCCGAAGGAATCAATCGTTTTGATGTTCAGTCCTCTTTAAAGTATGAAGATCTG GCTCCTTGCATAACTTTGAAGAGCTGGGTGCAAACGCTACG
|
|
|
INTRON 19 - 20
|
43,978,836
|
43,980,307
|
|
|
1,472
|
GTATCTCATTTTTTTAAGAGCTACA..........CAGTGATGCAGTTGCCTTGTTACAG |
|
20
|
EXON 20
|
43,980,308
|
43,980,404
|
2 |
0 |
97
|
CCCAGTAAATGCAAAAACCAGACCTTTAGGATCAAGAGATGTTTTGCCAAATAATCGCCA GCTTTATGAGATGGTCCTTACATACAGCTTTCATCAG
|
|
|
INTRON 20 - 21
|
43,980,405
|
43,981,729
|
|
|
1,325
|
GTATGTGTTTTCTAGTAAAATATAC..........TCATATCAATAATTTTTTTTAATAG |
|
21
|
EXON 21
|
43,981,730
|
43,981,867
|
0 |
0 |
138
|
CCCAAGAGCGGAGAAGTAACACCTAGTTGTCCACTCCTTTGTGAATTGTTATATGAGTCA GAATTTGACAGTCAGTTGTGGATTATTTTCGACCAGAACAAAAGACAGATGGGCTCAGGC GATGCCTATCCACATCAG
|
|
|
INTRON 21 - 22
|
43,981,868
|
43,983,071
|
|
|
1,204
|
GTATAAATTATAAAAAGTAATAAAT..........TTTTTCCAAATGTTTTCTTTTTTAG |
|
22
|
EXON 22
|
43,983,072
|
43,983,316
|
0 |
2 |
245
|
TATTCTCTGAAATTGGAGAAAGGAGATTATACAATTCGATTACAGATTCGTCATGAGCAA ATCAGTGATTTGGATCGTCTCAAAGATCTTCCGTTTATTGTTTCACATAGGTTGTCTAAT ACCTTGAGCTTAGATATTCATGAAAATCATAGCCTTGCACTTCTAGGAAAGAAGAAATCA AGCAGCTTAACATTACCACCCAAATACAATCAGCCATTCTTTGTTACTTCCTTACCTGAT GATAA
|
|
|
INTRON 22 - 23
|
43,983,317
|
43,983,513
|
|
|
197
|
GTAAGTGCTGATGTTGATGTATGTT..........TTTCCCCTTTTAATTCTCTCATTAG |
|
23
|
EXON 23
|
43,983,514
|
43,983,592
|
2 |
0 |
79
|
AATACCTAAGGGGGCAGGACCCGGATGCTACCTTGCAGGCTCCTTGACATTGTCAAAGAC TGAGCTTGGAAAGAAAGCT
|
|
|
INTRON 23 - 24
|
43,983,593
|
43,990,510
|
|
|
6,918
|
GTAAGTACTAGTGTTTTACACTGAA..........CTAAAACTTTCTTTCACCTTCCTAG |
|
24
|
EXON 24
|
43,990,511
|
43,990,662
|
0 |
2 |
152
|
GATGTGATCCCTGTTCATTACTATCTCATACCTCCACCAACAAAGATTAAGAATGGCAGC AAAGATAAAGAAAAGGATTCAGAAAAAGAGAAAGACTTGAAAGAAGAGTTTACTGAAGCA TTACGCGATCTCAAAATTCAGTGGATGACCAA
|
|
|
INTRON 24 - 25
|
43,990,663
|
43,991,262
|
|
|
600
|
GTAGGTCATTTTAGTGGATTCCAAG..........TTACTAATAAGACTCTTTTACATAG |
|
25
|
EXON 25
|
43,991,263
|
43,991,359
|
2 |
0 |
97
|
GCTTGATTCTACTGACATTTACAATGAATTGAAAGAAACATATCCTGCTTACCTTCCTTT GTATGTTGCACGTCTTCATCAACTGGATGCTGAAAAG
|
|
|
INTRON 25 - 26
|
43,991,360
|
43,992,263
|
|
|
904
|
GTTAGATATAGTAGTTTTTTACTAA..........ATACACTTCTTTTTTTTCTACCCAG |
|
26
|
EXON 26
|
43,992,264
|
43,992,394
|
0 |
2 |
131
|
GAACGAATGAAAAGACTTAATGAAATTGTTGATGCTGCCAATGCTGTTATTTCTCACATC GATCAAACCGCTCTTGCAGTTTACATTGCAATGAAGACTGACCCCAGGCCTGATGCAGCT ACTATAAAAAA
|
|
|
INTRON 26 - 27
|
43,992,395
|
43,999,627
|
|
|
7,233
|
GTACCTAACCAGTAAATAATCTTTC..........AAAAAAATTTTTATTTGCTCTCCAG |
|
27
|
EXON 27
|
43,999,628
|
43,999,835
|
2 |
0 |
208
|
TGATATGGACAAGCAGAAATCCACCCTGATAGATGCCCTCTGCAGGAAAGGATGTGCCCT GGCAGATCACCTTCTTCATACACAGCCTCACGACGGGGCAGCAGCTGGAGATGCTGAAGC AAAGGAAGAAGAAGGAGAAAGTACCATGGAATCTCTATCGGAAACCTATTGGGAAACTAC AAAGTGGACAGATCTTTTTGACACTAAG
|
|
|
INTRON 27 - 28
|
43,999,836
|
44,001,318
|
|
|
1,483
|
GTAACTCACCCTTTTGCTATTGGTC..........AAATAATCTCTATTTTATTTTATAG |
|
28
|
EXON 28
|
44,001,319
|
44,001,438
|
0 |
0 |
120
|
GTTTTGATATTTGCATACAAGCATGCATTAGTAAATAAGATGTATGGGAGAGGCCTTAAG TTTGCAACCAAACTCGTAGAAGAAAAACCAACAAAAGAAAACTGGAAAAATTGTATTCAA
|
|
|
INTRON 28 - 29
|
44,001,439
|
44,002,103
|
|
|
665
|
GTAAGTAATTATACTGTATATTACT..........TTACTAACTCTTTCTTTCATTATAG |
|
29
|
EXON 29
|
44,002,104
|
44,003,000
|
0 |
- |
897
|
CTCATGAAATTACTTGGATGGACCCACTGTGCATCTTTTACTGAAAACTGGCTCCCCATC ATGTATCCTCCTGATTATTGTGTATTCTAAAATAAGAACCAAAACTTTACATTTCAAAAC AGAAAATTTTATAGTGAATGGATATATGAAGAATTGTGTGGCATTTTTAGTCTGACTAAT GCATGTTTTCATCTACCATTCAATACTGATCATTAAAACTATATGTATTTATCAGAGAAC TCAGTGGCGTGTGGCTTAATACATGTAATACAGACCTCTGACATCATGCTGCTTTCCTAC TGCCTCCGACACTCGGCAAGTGGAGAGCACTCCCTGCCTGCCAGCCCCACCTGAGTTGGA TGCAGCTGCACACTGCATGAGAGGTTTTCATGTTTTAATTTTAGCTGTAAAATGTCATCC TGTTTTTTATTTTATAAATCACAAAGGTTAAAACATGCTAAATTTTTCCAATTATATAGA GGCCTTAAAAATGCTACATTAGGTGTAGCTAAATTATTTATTTGACTAAAAAATATGGGA ACATAATTTCCAGACTTTTTTTCTAAAAATAAATTCAATTAGTGGGGATGGTGGGGGGCA TAAACAAATGGCAACTGGGAAAAGAAACATGTTAAGGAAATCTCCATAAGGAGTCATAAC AAAAACAAGGTGTTTTTAGAGCACCCTCAATTACATAGCATCAGAATGAGTTAAAATTTC TTGTGTTGGTGACAGACAGCTGAATCTATCTGGTTTTGTAAAGAAATACACAGTATGTTT ATAACATTGAAATCATGTAAAATACATGAATAAACGTGCAAAACCACAGGCACAGTACAC CATATGCACTCTGATACCTTATTTTTTTTTTATAAATAAAAGTAAATATTAAAGCTA
|
|
|
3' upstream sequence
|
|
|
|
|
|
TTCACAATTGGTCTTAATTTTTCATAAAGTTTGGGGTTAGAACACAGACTTAATTTATTA
CATCTGTAGACCAAAAAGTGAGGTGATTTATTTTATAATGTTTCCTATGGGTTTGCAGTT
ATTTGAATATATTTCCAGTGCTCAACATGTGGTTAAGTCTTATATATGTTTAATTTGTGT
GTGTGTGTGTTTTTTTGTGAGATCTTTGTTTCTTCATTTACTGCTATAAAAGATCTAGTT
AATCTTGTCATTTGTAACTTTTTTTAATTAGAGCTTTATGAAAAATACAAATATGCTTTA
AAATGTTTTGCATGCAGTTTTTGCAGGATCTAGAGTCTTAACATCCTCCTGTGGATGCTA
GCTGAGTGCATGAGCTCTCATATGTGTTTTTACCTGTACACATACAGGCACATAATCTAG
TCTTAGATCAGAAAGATTATAGCAACTTCCAAAGATCACTTCAGACCAATTACTAATTTC
AGAATCTGTTTTACCAGCCAAGTCTTGCCCCTTCATCTAAAGTACCTCAGCGAGGGTCAG
TAAACTATGTCCATTGAGCCATATGTAGATAGTTTTATTGGTATAGTTCTGTAGTTGGGA
GAGACAGGGTGCTACCATGTATCATTTCCTGTCTGGATCATACAGTGCTTCTCGATAACA
GATGATTTCAAGTAAGCTCTACACTAGACCGTATCCTCAAACCAAAAAATTTGTAGAATG
ATGCATGGATGAGGTGGTGACAGAAAGTCATTGTATCCAAATGCCTACACTACTCACACT
GAAAACAACTGGAGAACTAGGGAAAGATACTTCCTAAAGAAACATTAGAGCTGCAGAGTA
TGCTTGGGATTGCTTCCTGAGGACATGTCCAGCTATAAGCAGTTTGTCATGGGATGTTCT
ACTCCTTAATACTGTTACCTACATCCTAGAATTACATATTCTTTATTTACCTTTGAAAAG
GCCAGTTCTACCTTAGACACACAAGACTCAATCTCCCTTG..........
|