MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Ogfrl1 (ENSMUSG00000026158)

Cross Reference

EMBL	AC165368
GO	GO:0003674, GO:0004872, GO:0005575, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0008150
MGI_trans_name	Ogfrl1-002
OTTP	OTTMUSP00000066718
OTTT	OTTMUST00000120616
UniParc	UPI00046211A5
Uniprot/SPTREMBL	A0A087WNQ8
Vega_transcript	OTTMUST00000120616, Ogfrl1-002
Vega_translation	178834, OTTMUSP00000066718

Definition

protein_id:ENSMUSP00000139453
translation:

MMLEFFGIKLIDKTGNVARAGNWQERFQHLNESQHNYLRITRILKSLGELGYESFKSPLV
KFILHEALVENTIPNIKQSALEYFVYTIRDRR

Chromosome

Length
Position(start - end)

5,555
23,370,268 - 23,375,824

Orient to Chromosome

minus

Link

Location : (1:23370268-23375824)
/

Detail Map

name	Ogfrl1 (ENSMUSG00000026158)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Ogfrl1 note : opioid growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:1917405]

name	Ogfrl1 (ENSMUSG00000026158)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000027343

name	Ogfrl1 (ENSMUSG00000026158)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000188677

name	Ogfrl1 (ENSMUSG00000026158) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS35526.1 Uniprot/SWISSPROT:Q8VE52 RefSeq_peptide:NP_001074548 RefSeq_mRNA:NM_001081079.1 RefSeq_mRNA_predicted:XM_006496261.1 RefSeq_peptide_predicted:XP_006496324.1 Vega_transcript:OTTMUST00000120614 Vega_transcript:Ogfrl1-001 UCSC:uc007amb.1 EMBL:AC165368 EMBL:BC019747 GO:GO:0003674 GO:GO:0004872 GO:GO:0005575 GO:GO:0008150 GO:GO:0016020 MGI_trans_name:Ogfrl1-001 Vega_translation:178833 Vega_translation:OTTMUSP00000066717 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 protein_id:AAH19747.1 OTTP:OTTMUSP00000066717 OTTT:OTTMUST00000120614 UniParc:UPI00006037BA
definition	note : transcript_id=ENSMUST00000027343 protein_id : ENSMUSP00000027343 translation : MGNLLGGVSFREPTTVEDCDSTWQTDSEPEPEQPGPAGGGEGQQHDEPEQPKQPPERAGGRPRASPVPEDHAEAAGAEQGGESTEGNAKPKRSFYAARDLYKYRHQYPNFKDIRYQNDLSNLRFYKNKIPFKPDGVYIEEVLNKWKGDYEKLEHNHTYIQWLFPLREQGLNFYAKELTTYEIEEFKKTKEAIRRFLLAYKMMLEFFGIKLIDKTGNVARAGNWQERFQHLNESQHNYLRITRILKSLGELGYESFKSPLVKFILHEALVENTIPNIKQSALEYFVYTIRDRRERRKLLRFAQKHYTPSENFIWGPPKKELPERSKAQKTPTLPASGSNGQTSTHKKSKDSKISPGASHVNSKSVEEKKGASREPGEEADKPSPEPGSGDPKPRNTEKDSAADQSDSPPEKTVPDTAGKGECPTSSEKDGEGEDQSKDSENPENAGCHAEVVAQQNATNPQTSSG

name	Ogfrl1 (ENSMUSG00000026158) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000120616 Vega_transcript:Ogfrl1-002 Uniprot/SPTREMBL:A0A087WNQ8 EMBL:AC165368 GO:GO:0003674 GO:GO:0004872 GO:GO:0005575 GO:GO:0008150 GO:GO:0016020 MGI_trans_name:Ogfrl1-002 Vega_translation:178834 Vega_translation:OTTMUSP00000066718 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 OTTP:OTTMUSP00000066718 OTTT:OTTMUST00000120616 UniParc:UPI00046211A5
definition	note : transcript_id=ENSMUST00000188677 protein_id : ENSMUSP00000139453 translation : MMLEFFGIKLIDKTGNVARAGNWQERFQHLNESQHNYLRITRILKSLGELGYESFKSPLVKFILHEALVENTIPNIKQSALEYFVYTIRDRR

name
type	misc_feature
link
xref
definition	note : contig AC165368.5 1..204151(-1)

name
type	misc_feature
link
xref
definition	note : contig AC122482.4 196..149646(1)

name	Ogfrl1 (ENSMUSG00000026158)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000120615 Vega_transcript:OTTMUST00000120615 MGI_trans_name:Ogfrl1-003 OTTT:OTTMUST00000120615
definition	note : retained_intron note : transcript_id=ENSMUST00000186064

name	Ogfrl1 (ENSMUSG00000026158)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000120832 Vega_transcript:OTTMUST00000120832 UCSC:uc007amc.1 MGI_trans_name:Ogfrl1-004 OTTT:OTTMUST00000120832
definition	note : processed_transcript note : transcript_id=ENSMUST00000189537

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Ogfrl1 (ENSMUSG00000026158)
Transcript ID	ENSMUST00000188677

Reports
substitution
cSNPs	2
Insertion	19
Deletion	31
SNPs	+1kb 23397628(c.-21804A>G), 23397629(c.-21805C>T), 23397704(c.-21880T>C), 23397816(c.-21992T>C), 23397872(c.-22048G>A), 23398021(c.-22197A>G), 23398359(c.-22535T>C), 23398566(c.-22742T>C), 23398642(c.-22818G>A), 23398921(c.-23097G>A), 23398933(c.-23109A>G), 23398973(c.-23149C>T), 23399031(c.-23207A>C), 23399148(c.-23324T>G), 23399157(c.-23333A>C), 23399224(c.-23400T>C), 23399238(c.-23414T>G), 23399252(c.-23428C>T), 23399427(c.-23603A>G), 23399470(c.-23646T>C), 23399533(c.-23709T>C), 23399721(c.-23897T>C), 23399863(c.-24039T>C), 23400070(c.-24246T>A), 23400156(c.-24332T>A), 23400188(c.-24364G>A), 23400489(c.-24665T>A), 23400536(c.-24712C>T), 23400646(c.-24822G>A), 23400651(c.-24827C>T), 23400685(c.-24861T>C), 23400791(c.-24967A>G), 23400822(c.-24998G>A), 23400907(c.-25083G>T), 23400936(c.-25112C>T), 23401153(c.-25329C>T), 23401165(c.-25341A>G), 23401166(c.-25342A>G), 23401193(c.-25369C>A), 23401585(c.-25761T>A), 23401623(c.-25799G>A), 23401752(c.-25928T>A), 23401767(c.-25943A>C), 23401788(c.-25964C>A), 23401791(c.-25967T>A), 23401812(c.-25988C>A), 23401860(c.-26036C>T), 23401864(c.-26040C>T), 23401983(c.-26159T>A), 23402124(c.-26300T>C), 23402127(c.-26303G>A), 23402129(c.-26305A>T), 23402218(c.-26394G>A), 23402418(c.-26594A>T), 5'UTR 23376045(c.-109C>T), 23392951(c.-444C>A), 23392952(c.-445A>G), 23392958(c.-451C>A), 23392976(c.-469G>T), CDS 23370388(c.156C>T), 23375765(c.60C>T), 3'UTR INTRON 23370753(c.96-305C>T), 23370772(c.96-324C>G), 23370832(c.96-384C>T), 23370834(c.96-386C>T), 23370844(c.96-396T>A), 23371007(c.96-559A>G), 23371025(c.96-577G>A), 23371042(c.96-594C>G), 23371056(c.96-608G>A), 23371095(c.96-647C>T), 23371419(c.96-971A>G), 23371432(c.96-984C>T), 23371614(c.96-1166T>C), 23371616(c.96-1168T>C), 23371617(c.96-1169C>T), 23371695(c.96-1247G>A), 23371796(c.96-1348G>C), 23371815(c.96-1367C>T), 23371901(c.96-1453T>C), 23371924(c.96-1476C>A), 23372032(c.96-1584G>C), 23372069(c.96-1621A>C), 23372117(c.96-1669G>A), 23372126(c.96-1678C>T), 23372135(c.96-1687G>A), 23372314(c.96-1866A>C), 23372362(c.96-1914T>G), 23372640(c.96-2192T>C), 23372643(c.96-2195G>A), 23372656(c.96-2208G>A), 23372660(c.96-2212G>A), 23372688(c.96-2240A>G), 23372771(c.96-2323G>A), 23372774(c.96-2326T>G), 23372788(c.96-2340C>T), 23373036(c.96-2588G>A), 23373099(c.95+2631G>A), 23373353(c.95+2377A>G), 23373750(c.95+1980A>G), 23373827(c.95+1903T>A), 23374044(c.95+1686G>A), 23374057(c.95+1673G>T), 23374083(c.95+1647T>C), 23374154(c.95+1576G>A), 23374848(c.95+882A>G), 23375695(c.95+35T>G), 23376149(c.-119+22A>G), 23376159(c.-119+12G>A), 23376857(c.-197-608T>C), 23376960(c.-197-711A>T), 23377012(c.-197-763G>A), 23377013(c.-197-764G>A), 23377176(c.-197-927G>A), 23377218(c.-197-969A>G), 23377288(c.-197-1039G>A), 23377330(c.-197-1081T>G), 23377405(c.-197-1156G>A), 23377440(c.-197-1191A>G), 23377483(c.-197-1234G>A), 23377768(c.-198+958T>G), 23377840(c.-198+886T>C), 23377855(c.-198+871C>T), 23377971(c.-198+755G>A), 23378004(c.-198+722C>A), 23378053(c.-198+673G>A), 23378098(c.-198+628T>C), 23378242(c.-198+484A>G), 23378380(c.-198+346T>A), 23378593(c.-198+133G>A), 23378905(c.-277+67C>T), 23378922(c.-277+50C>T), 23379209(c.-363-151G>A), 23379294(c.-363-236G>A), 23379296(c.-363-238A>G), 23379346(c.-363-288C>A), 23379426(c.-363-368C>T), 23379511(c.-363-453C>T), 23379652(c.-363-594C>T), 23379686(c.-363-628T>C), 23379706(c.-363-648A>G), 23379716(c.-363-658A>G), 23379808(c.-363-750G>A), 23379840(c.-363-782T>A), 23379854(c.-363-796G>A), 23379964(c.-363-906T>C), 23380159(c.-363-1101A>G), 23380303(c.-363-1245G>A), 23380522(c.-363-1464G>A), 23380537(c.-363-1479C>T), 23380588(c.-363-1530G>A), 23380616(c.-363-1558G>A), 23380619(c.-363-1561T>C), 23380645(c.-363-1587G>A), 23380675(c.-363-1617A>G), 23380756(c.-363-1698G>C), 23380994(c.-363-1936T>C), 23381193(c.-363-2135A>T), 23381194(c.-363-2136T>C), 23381213(c.-363-2155T>C), 23381214(c.-363-2156T>A), 23381237(c.-363-2179C>T), 23381297(c.-363-2239C>T), 23381298(c.-363-2240G>A), 23381443(c.-363-2385G>A), 23381446(c.-363-2388G>T), 23381730(c.-363-2672C>G), 23382172(c.-363-3114T>C), 23382184(c.-363-3126C>T), 23382455(c.-363-3397G>T), 23382971(c.-363-3913G>C), 23383849(c.-363-4791T>C), 23384099(c.-363-5041T>G), 23384120(c.-363-5062T>C), 23384131(c.-363-5073A>G), 23384217(c.-363-5159C>G), 23384328(c.-363-5270C>G), 23384419(c.-363-5361A>G), 23384529(c.-363-5471C>A), 23384628(c.-363-5570T>C), 23385112(c.-363-6054C>A), 23385461(c.-363-6403A>T), 23385522(c.-363-6464G>A), 23385667(c.-363-6609C>G), 23385677(c.-363-6619C>T), 23386574(c.-364+6297C>G), 23386692(c.-364+6179T>C), 23386870(c.-364+6001A>T), 23386898(c.-364+5973A>T), 23386901(c.-364+5970A>G), 23386913(c.-364+5958G>C), 23386959(c.-364+5912C>T), 23387029(c.-364+5842C>T), 23387328(c.-364+5543G>A), 23387458(c.-364+5413C>T), 23387504(c.-364+5367G>T), 23387528(c.-364+5343T>C), 23387534(c.-364+5337G>A), 23387582(c.-364+5289T>C), 23387595(c.-364+5276C>G), 23387605(c.-364+5266T>G), 23387633(c.-364+5238G>A), 23387636(c.-364+5235A>G), 23387640(c.-364+5231C>G), 23387686(c.-364+5185A>G), 23387690(c.-364+5181G>A), 23387707(c.-364+5164G>A), 23387771(c.-364+5100G>T), 23387782(c.-364+5089G>A), 23387814(c.-364+5057G>T), 23387889(c.-364+4982G>A), 23387895(c.-364+4976C>A), 23387975(c.-364+4896C>A), 23388036(c.-364+4835T>C), 23388066(c.-364+4805A>G), 23388146(c.-364+4725A>G), 23388258(c.-364+4613T>C), 23388260(c.-364+4611G>A), 23388572(c.-364+4299T>A), 23388787(c.-364+4084C>T), 23388794(c.-364+4077C>T), 23388903(c.-364+3968A>G), 23388911(c.-364+3960G>A), 23388925(c.-364+3946C>T), 23388975(c.-364+3896G>C), 23388995(c.-364+3876G>A), 23389018(c.-364+3853G>A), 23389081(c.-364+3790T>G), 23389082(c.-364+3789A>T), 23389195(c.-364+3676G>T), 23389282(c.-364+3589C>T), 23389339(c.-364+3532C>T), 23389426(c.-364+3445T>A), 23389467(c.-364+3404A>C), 23389481(c.-364+3390A>G), 23389495(c.-364+3376A>G), 23389525(c.-364+3346G>A), 23389527(c.-364+3344G>A), 23389570(c.-364+3301T>C), 23389698(c.-364+3173C>T), 23389763(c.-364+3108C>T), 23389879(c.-364+2992C>T), 23389933(c.-364+2938T>C), 23389994(c.-364+2877G>C), 23389999(c.-364+2872G>A), 23390021(c.-364+2850T>C), 23390033(c.-364+2838C>T), 23390055(c.-364+2816C>T), 23390066(c.-364+2805A>G), 23390234(c.-364+2637A>C), 23390323(c.-364+2548G>C), 23390328(c.-364+2543A>C), 23390452(c.-364+2419G>A), 23390607(c.-364+2264T>C), 23390824(c.-364+2047C>T), 23391018(c.-364+1853C>T), 23391377(c.-364+1494T>C), 23391527(c.-364+1344A>C), 23391646(c.-364+1225G>A), 23391692(c.-364+1179A>G), 23391932(c.-364+939T>C), 23392072(c.-364+799A>C), 23392191(c.-364+680G>A), 23392197(c.-364+674C>T), 23392555(c.-364+316A>G), 23392565(c.-364+306G>A), 23392578(c.-364+293C>A), 23392603(c.-364+268A>G), 23392613(c.-364+258A>T), 23392635(c.-364+236G>T), 23392715(c.-364+156T>C), 23392802(c.-364+69T>A), 23393072(c.-504-61C>A), 23393147(c.-504-136A>C), 23393178(c.-504-167A>G), 23393189(c.-504-178C>A), 23393346(c.-504-335G>A), 23393417(c.-504-406G>T), 23393482(c.-504-471G>A), 23393729(c.-504-718A>G), 23393932(c.-504-921C>T), 23394524(c.-504-1513T>G), 23394848(c.-504-1837C>A), 23394864(c.-504-1853A>C), 23394880(c.-504-1869C>T), 23395199(c.-504-2188A>T), 23395653(c.-505+1861G>A), 23395689(c.-505+1825T>C), 23395815(c.-505+1699A>C), 23395847(c.-505+1667C>T), 23395884(c.-505+1630G>A), 23396273(c.-505+1241T>C), 23396580(c.-505+934T>C), 23396639(c.-505+875C>A), 23397019(c.-505+495C>T), 23397101(c.-505+413T>C), -1kb 23365268(c.5000G>A), 23365490(c.4778A>C), 23365506(c.4762C>G), 23365627(c.4641C>T), 23365658(c.4610T>A), 23365709(c.4559T>C), 23365799(c.4469A>G), 23365844(c.4424G>A), 23365848(c.4420C>T), 23365922(c.4346G>T), 23366268(c.4000G>T), 23366529(c.3739T>G), 23366611(c.3657T>C), 23366670(c.3598A>G), 23367044(c.3224T>C), 23367086(c.3182G>C), 23367244(c.3024G>A), 23367310(c.2958C>T), 23367398(c.2870T>G), 23367670(c.2598A>G), 23367687(c.2581T>C), 23367739(c.2529T>A), 23367784(c.2484C>T), 23367814(c.2454G>T), 23367815(c.2453T>C), 23367827(c.2441A>G), 23367887(c.2381A>G), 23367945(c.2323C>G), 23367998(c.2270G>A), 23368118(c.2150C>A), 23368199(c.2069G>A), 23368209(c.2059T>C), 23368321(c.1947G>A), 23368368(c.1900C>A), 23368494(c.1774C>G), 23368548(c.1720T>C), 23368750(c.1518A>T), 23368926(c.1342A>G), 23368979(c.1289G>A), 23369109(c.1159T>C), 23369126(c.1142T>G), 23369127(c.1141C>T), 23369142(c.1126A>G), 23369229(c.1039G>A), 23369288(c.980C>G), 23369447(c.821G>T), 23369524(c.744T>A), 23369669(c.599A>G), 23369742(c.526A>T), 23369777(c.491C>T), 23369782(c.486A>G), 23370084(c.184C>T),
Insertions	+1kb 23398642 (c.-22819_-22818insAA), 23400591 (c.-24768_-24767insG), 23400605 (c.-24782_-24781insAA), 23401755 (c.-25932_-25931insT), 5'UTR CDS 3'UTR INTRON 23375357 (c.95+372dupT), 23380956 (c.-363-1899_-363-1898insGG), 23382476 (c.-363-3419dupT), 23382743 (c.-363-3686dupC), 23383281 (c.-363-4224_-363-4223insAGCGG), 23385389 (c.-363-6332_-363-6331insT), 23392635 (c.-364+235_-364+236insA), 23392712 (c.-364+158_-364+159insAA), 23393160 (c.-504-150dupG), 23394247 (c.-504-1237_-504-1236insG), -1kb 23366571 (c.3696dupT), 23367041 (c.3226dupA), 23368433 (c.1834dupT), 23368442 (c.1825_1826insTT), 23368664 (c.1603_*1604insTGTGTG),
Deletions	+1kb 23399739 (c.-23921_-23916delAGGTGC), 23399786 (c.-23966_-23963delCTCT), 23400019 (c.-24201_-24196delAAAATG), 23400442 (c.-24623_-24619delGGTTT), 23401897 (c.-26076_-26074delGTT), 5'UTR 23392901 (c.-402_-395delCAGTCAAG), CDS 3'UTR INTRON 23371181 (c.96-735_96-734delTT), 23371679 (c.96-1232delC), 23373921 (c.95+1808delT), 23374668 (c.95+1057_95+1061delAAAAA), 23374777 (c.95+950_95+952delTTC), 23376064 (c.-118-13_-118-11delTTT), 23377070 (c.-197-822delA), 23377419 (c.-197-1174_-197-1171delTTAA), 23377659 (c.-198+1059_-198+1066delCGTGTGTG), 23380906 (c.-363-1849delG), 23381129 (c.-363-2073_-363-2072delAA), 23384850 (c.-363-5793delT), 23385473 (c.-363-6417_-363-6416delTC), 23388111 (c.-364+4759delA), 23388985 (c.-364+3877_-364+3885delGGCTCTGCT), 23396220 (c.-505+1290_-505+1293delTCTC), -1kb 23366819 (c.3447_3448delTT), 23367570 (c.2696_2697delTT), 23367603 (c.2663_2664delAC), 23367656 (c.2611delT), 23367710 (c.2556_2557delCT), 23367714 (c.2551_2553delACT), 23368411 (c.1856delA), 23368713 (c.1550_1554delTATAT), 23368926 (c.1340_1341delGA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	0
synonymous substitutions	23370388 (p.Tyr52Tyr), 23375765 (p.Ala20Ala),
non-synonymous substitutions
B6 transcript (ENSMUST00000188677)	MMLEFFGIKLIDKTGNVARAGNWQERFQHLNESQHNYLRITRILKSLGELGYESFKSPLV KFILHEALVENTIPNIKQSALEYFVYTIRDRR
MSMv4 transcript	MMLEFFGIKLIDKTGNVARAGNWQERFQHLNESQHNYLRITRILKSLGELGYESFKSPLV KFILHEALVENTIPNIKQSALEYFVYTIRDRR
homology	100.00 (92 / 92)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Ogfrl1 (ENSMUSG00000026158)
Transcript ID	ENSMUST00000188677


..........GACTATGGTTGTCATGTTAGAATGCATTCAGTGATGATGTATACTATGTG
CAATGTGACTATTGTCTCAATTGGCAGTGTGTATCCACTGCAAAGCACTAACGAAGCCTG
TGCAAGTGAAATGTCGCCATCAAAGCCTGTACATACAGTGCAAGTGCACACATGCACAGG
CACATGCACACACACACACACACACACACACACACACACACACACACACCACCATACCAC
CACCATACCACACCAGTGCTGGGCATTTTCTCAGAAGAGTTACAGCCCTAATTTTCACTT
GAAAAACCTGTCTTTGATTTGCTAGAGAAAGTACTGAATGTAGCACATCTTCTGAAGTAT
GAAAATAAAAAGATCCATCTCCAGATGTTCTTGTTAATTGTAGAACCTCCTTAGAGGATG
AAGGTGAAGGTACCAAATGGCAGCCATCATGGAAGAGATCTGGTATTTTCAAATTGATAC
CACAATAAGATGAACCCCTTAAGGGAGTTGGGGGATTGGGGAGATGGGGAGATGGCTGTG
TGACTTTCTGAAAATGGCGGGCACCAGGCACAAAGGCAAATTCAGTCATGGAAGTGATAT
ATTTAGCAAGAAGACTGACATGTTATAGAAACACTGAAGCTCATTCAATGACTTGGAGCA
GTTTCAGGAGGGCGATAGAAAAGTGGAATTCAGACAGCACTGGAGGAAACACGTAATGAA
GAGGAAGCACACAGACACCTGTCGTTGGTAGTTTGGGGTAAGTGGAAGTTAAAAATAGTG
CAGTGGCAATAGGAGCTTCTGGCCAAGTGAACTGCTTTCAAAACTTGGTCTGAGGATCAC
ACTGTCTCCCTCTGTCTCTATCTCATCCAAGGGTGTGATCATAATAAAGGATAAATTGGC
AGTGCAAAAGAGTGGTGGGTGCTGAGACAAGAGCCCGAGGACTTCCCTGAAAAGGAACTA
TATATAGGACCTTGCAAACCAGTTGTTTTTGTTTCTGCCTCTGTCCAACC
CAGAATAACAGCCAGAGCATTTATGTGG
GTAAGTAGTCTGGGATACAAATGTT..........TCTCTTCCTTCCAACTACCCTGTAG
CAAACATCCCATAATTCAGCAGGAGGCAGAGCAGGTCGTCTCCAGGAGTGGATATTCCTGATGCTATGCTACTTGGCTGGAACCCATGACAATCCATTCAAGCAGTCAAGTCACTGACGGGCAGAAAAGCTAGAGTTCAAA
GTATGTTTGTATGTGTGGTATGTAA..........AGTGGAGTTCCACTTTGTGTCCTAG
GGCGGCGAGTCCACGGAAGGAAATGCCAAACCAAAGAGAAGCTTCTATGCCGCGAGGGATCTGTACAAGTACCGACATCAGTACCCA
GTAAGACACTGCTGTGCCTTTTCAA..........ATTAATTTATCTTTTCCTCTAGCAG
AACTTCAAAGATATCCGATATCAAAATGACTTGAGCAACCTTCGCTTTTATAAGAACAAAATTCCATTTAAGCCGGATG
GTGAGTAAGCCTCCTTGCTAACATG..........TTTTCTCAATATATTTGCCACATAG
GTGTTTACATTGAAGAGGTTCTAAATAAGTGGAAAGGGGACTACGAGAAGCTGGAGCACAACCACACGTACATCCAATG
GTCAGTAACACACTCGCCGCCGTGA..........TTTTTTTTTTTTTTTAACAATCAAG
GCTTTTCCCTCTGAGAGAACAAGGCTTGAACTTTTATGCTAAAGAATTAACCACATATGAAATCGAG
GTAATGCAATCTCAATTCACTTTCC..........ACTTCTCGCCCCCCTTTTATATTAG
GAATTCAAAAAAACAAAGGAAGCAATCAGAAGATTCCTCTTGGCTTATAAAATGATGCTAGAGTTTTTTGGAATAAAGCTGATTGATAAGACTGGAAATGTTGCTCGGGCTGGAAACTGGCAAGAAAGATTTCAACATCTTAATGA
GTAAGTGAAGCCTGAGTGGTAAGCC..........CATTTTATTCAATGCTCTCTTTCAG
GTCTCAGCACAACTATTTAAGAATTACGCGAATTCTTAAAAGCCTTGGCGAGCTTGGATATGAGAGTTTTAAATCTCCTCTGGTAAAATTCATTCTTCACGAGGCTCTAGTGGAGAATACTATTCCCAATATTAAGCAGAGTGCTCTGGAGTACTTTGTTTATACAATTAGAGACAGGAGA
GAGAGGAGAAAGCTCCTGCGATTTGCCCAGAAACATTACACACCATCAGAGAATTTCATC
TGGGGGCCACCTAAGAAAGAACTGCCAGAGCGAAGCAAAGCCCAGAAAACCCCGACTCTG
CCCGCGTCGGGCTCCAATGGTCAAACTTCTACACACAAGAAATCCAAGGACTCCAAAATT
TCCTCAGGAGCTAGTCACGTAAATAGCAAATCAGTGGAAGAAAAAAAGGGGGCATCAAGA
GAGCCTGGGGAGGAGGCGGACAAGCCGAGCCCAGAGCCTGGCAGTGGAGATCCCAAGCCA
AGAAACACAGAGAAAGACAGTGCTGCTGACCAATCTGATTCTCCACCCGAGAAAACAGTT
CCTGATACCGCAGGAAAAGGGGAATGTCCAACTTCTTCTGAAAAAGATGGAGAAGGGGAA
GACCAGAGCAAAGACTCTGAAAATCCTGAAAATGCCGGTTGTCATGCTGAGGTAGTGGCA
CAGCAGAATGTCACAAACCCACAAACCAGTTCTGGTTAAAGAAGTTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAACTGCTTTCTAATGTGTCCTGAAGAACAGAAGT
GAGGTCACATTTAAAATGTTGGCCACCTGTGACTTTTGCTGTAAGCCTTTTTATTTTGGA
TCACAATGAATTGGACATTAAATAAGAAGTTTTAAGACCAGATCCAATAAAAGAATACAT
TTAGGATGTGTTTTCAAATTCTGAATATAACAGTCACTTTAAAAATAGTTTCAAGTTATC
TAGATGCAGTTCCATAGCATTTGGTATTCAACACGTTCTCTTGAGAGATTCCTGCAGACA
TCAAGACCTCTGGTGATGCGGCAGCACCTGGTTTTTAGACTAGTGAAGGATGCTGCGTGA
GGTGTGCCCAAATGTTTCCAGAAACTAGTCTGGATTCCCTGATTACAGCGCCTCTGTGCT
CTTAGCTTTGGTGGCTGCTGTGGCTGGTCCTTCCTTCCCA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GACTATGGTTGTCATGTTAGAATGCATTCAGTGATGATGTATACTATGTG CAATGTGACTATTGTCTCAATTGGCAGTGTGTATCCACTGCAAAGCACTAACGAAGCCTG TGCAAGTGAAATGTCGCCATCAAAGCCTGTACATACAGTGCAAGTGCACACATGCACAGG CACATGCACACACACACACACACACACACACACACACACACACACACACCACCATACCAC CACCATACCACACCAGTGCTGGGCATTTTCTCAGAAGAGTTACAGCCCTAATTTTCACTT GAAAAACCTGTCTTTGATTTGCTAGAGAAAGTACTGAATGTAGCACATCTTCTGAAGTAT GAAAATAAAAAGATCCATCTCCAGATGTTCTTGTTAATTGTAGAACCTCCTTAGAGGATG AAGGTGAAGGTACCAAATGGCAGCCATCATGGAAGAGATCTGGTATTTTCAAATTGATAC CACAATAAGATGAACCCCTTAAGGGAGTTGGGGGATTGGGGAGATGGGGAGATGGCTGTG TGACTTTCTGAAAATGGCGGGCACCAGGCACAAAGGCAAATTCAGTCATGGAAGTGATAT ATTTAGCAAGAAGACTGACATGTTATAGAAACACTGAAGCTCATTCAATGACTTGGAGCA GTTTCAGGAGGGCGATAGAAAAGTGGAATTCAGACAGCACTGGAGGAAACACGTAATGAA GAGGAAGCACACAGACACCTGTCGTTGGTAGTTTGGGGTAAGTGGAAGTTAAAAATAGTG CAGTGGCAATAGGAGCTTCTGGCCAAGTGAACTGCTTTCAAAACTTGGTCTGAGGATCAC ACTGTCTCCCTCTGTCTCTATCTCATCCAAGGGTGTGATCATAATAAAGGATAAATTGGC AGTGCAAAAGAGTGGTGGGTGCTGAGACAAGAGCCCGAGGACTTCCCTGAAAAGGAACTA TATATAGGACCTTGCAAACCAGTTGTTTTTGTTTCTGCCTCTGTCCAACC
1	EXON 1	23,397,514	23,397,541	-	-	28	CAGAATAACAGCCAGAGCATTTATGTGG
	INTRON 1 - 2	23,393,012	23,397,513			4,502	GTAAGTAGTCTGGGATACAAATGTT..........TCTCTTCCTTCCAACTACCCTGTAG
2	EXON 2	23,392,871	23,393,011	-	-	141	CAAACATCCCATAATTCAGCAGGAGGCAGAGCAGGTCGTCTCCAGGAGTGGATATTCCTG ATGCTATGCTACTTGGCTGGAACCCATGACAATCCATTCAAGCAGTCAAGTCACTGACGG GCAGAAAAGCTAGAGTTCAAA
	INTRON 2 - 3	23,379,059	23,392,870			13,812	GTATGTTTGTATGTGTGGTATGTAA..........AGTGGAGTTCCACTTTGTGTCCTAG
3	EXON 3	23,378,972	23,379,058	-	-	87	GGCGGCGAGTCCACGGAAGGAAATGCCAAACCAAAGAGAAGCTTCTATGCCGCGAGGGAT CTGTACAAGTACCGACATCAGTACCCA
	INTRON 3 - 4	23,378,805	23,378,971			167	GTAAGACACTGCTGTGCCTTTTCAA..........ATTAATTTATCTTTTCCTCTAGCAG
4	EXON 4	23,378,726	23,378,804	-	-	79	AACTTCAAAGATATCCGATATCAAAATGACTTGAGCAACCTTCGCTTTTATAAGAACAAA ATTCCATTTAAGCCGGATG
	INTRON 4 - 5	23,376,250	23,378,725			2,476	GTGAGTAAGCCTCCTTGCTAACATG..........TTTTCTCAATATATTTGCCACATAG
5	EXON 5	23,376,171	23,376,249	-	-	79	GTGTTTACATTGAAGAGGTTCTAAATAAGTGGAAAGGGGACTACGAGAAGCTGGAGCACA ACCACACGTACATCCAATG
	INTRON 5 - 6	23,376,055	23,376,170			116	GTCAGTAACACACTCGCCGCCGTGA..........TTTTTTTTTTTTTTTAACAATCAAG
6	EXON 6	23,375,988	23,376,054	-	-	67	GCTTTTCCCTCTGAGAGAACAAGGCTTGAACTTTTATGCTAAAGAATTAACCACATATGA AATCGAG
	INTRON 6 - 7	23,375,876	23,375,987			112	GTAATGCAATCTCAATTCACTTTCC..........ACTTCTCGCCCCCCTTTTATATTAG
7	EXON 7	23,375,730	23,375,875	-	2	146	GAATTCAAAAAAACAAAGGAAGCAATCAGAAGATTCCTCTTGGCTTATAAAATGATGCTA GAGTTTTTTGGAATAAAGCTGATTGATAAGACTGGAAATGTTGCTCGGGCTGGAAACTGG CAAGAAAGATTTCAACATCTTAATGA
	INTRON 7 - 8	23,370,449	23,375,729			5,281	GTAAGTGAAGCCTGAGTGGTAAGCC..........CATTTTATTCAATGCTCTCTTTCAG
8	EXON 8	23,370,268	23,370,448	2	-	181	GTCTCAGCACAACTATTTAAGAATTACGCGAATTCTTAAAAGCCTTGGCGAGCTTGGATA TGAGAGTTTTAAATCTCCTCTGGTAAAATTCATTCTTCACGAGGCTCTAGTGGAGAATAC TATTCCCAATATTAAGCAGAGTGCTCTGGAGTACTTTGTTTATACAATTAGAGACAGGAG A
	3' upstream sequence						GAGAGGAGAAAGCTCCTGCGATTTGCCCAGAAACATTACACACCATCAGAGAATTTCATC TGGGGGCCACCTAAGAAAGAACTGCCAGAGCGAAGCAAAGCCCAGAAAACCCCGACTCTG CCCGCGTCGGGCTCCAATGGTCAAACTTCTACACACAAGAAATCCAAGGACTCCAAAATT TCCTCAGGAGCTAGTCACGTAAATAGCAAATCAGTGGAAGAAAAAAAGGGGGCATCAAGA GAGCCTGGGGAGGAGGCGGACAAGCCGAGCCCAGAGCCTGGCAGTGGAGATCCCAAGCCA AGAAACACAGAGAAAGACAGTGCTGCTGACCAATCTGATTCTCCACCCGAGAAAACAGTT CCTGATACCGCAGGAAAAGGGGAATGTCCAACTTCTTCTGAAAAAGATGGAGAAGGGGAA GACCAGAGCAAAGACTCTGAAAATCCTGAAAATGCCGGTTGTCATGCTGAGGTAGTGGCA CAGCAGAATGTCACAAACCCACAAACCAGTTCTGGTTAAAGAAGTTAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAACTGCTTTCTAATGTGTCCTGAAGAACAGAAGT GAGGTCACATTTAAAATGTTGGCCACCTGTGACTTTTGCTGTAAGCCTTTTTATTTTGGA TCACAATGAATTGGACATTAAATAAGAAGTTTTAAGACCAGATCCAATAAAAGAATACAT TTAGGATGTGTTTTCAAATTCTGAATATAACAGTCACTTTAAAAATAGTTTCAAGTTATC TAGATGCAGTTCCATAGCATTTGGTATTCAACACGTTCTCTTGAGAGATTCCTGCAGACA TCAAGACCTCTGGTGATGCGGCAGCACCTGGTTTTTAGACTAGTGAAGGATGCTGCGTGA GGTGTGCCCAAATGTTTCCAGAAACTAGTCTGGATTCCCTGATTACAGCGCCTCTGTGCT CTTAGCTTTGGTGGCTGCTGTGGCTGGTCCTTCCTTCCCA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Ogfrl1 (ENSMUSG00000026158)
Transcript ID	ENSMUST00000188677

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 92 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information