MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Stat1 (ENSMUSG00000026104)

Cross Reference

EMBL	AC123752, BC042551
GO	GO:0000790, GO:0000978, GO:0000979, ...show all
goslim_goa	GO:0000228, GO:0001071, GO:0002376, ...show all
MGI_trans_name	Stat1-010
OTTP	OTTMUSP00000066951
OTTT	OTTMUST00000121566
protein_id	AAH42551.1
Reactome	R-MMU-1059683, R-MMU-1169408, R-MMU-1169410, ...show all
UCSC	uc007ayd.2
UniParc	UPI00000E8F99

Uniprot/SPTREMBL	Q8CFQ1
Vega_transcript	OTTMUST00000121566, Stat1-010
Vega_translation	179240, OTTMUSP00000066951

Definition

protein_id:ENSMUSP00000140482
translation:

NQTNRQQHGGAHLSSQAGGVGGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIK
KHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEP
DFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKE
APEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMM
STV

Chromosome

Length
Position(start - end)

9,038
52,150,258 - 52,159,297

Orient to Chromosome

plus

Link

Location : (1:52150258-52159297)
/

Detail Map

name	Gm28177 (ENSMUSG00000101628)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm28177 note : predicted gene 28177 [Source:MGI Symbol;Acc:MGI:5578883]

name	Stat1 (ENSMUSG00000026104)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Stat1 note : signal transducer and activator of transcription 1 [Source:MGI Symbol;Acc:MGI:103063]

name	Gls (ENSMUSG00000026103)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gls note : glutaminase [Source:MGI Symbol;Acc:MGI:95752]

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186574

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000070968

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000191435

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186857

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000189347

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186057

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000189244

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000189336

name	Gls (ENSMUSG00000026103)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000114513

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121557 Vega_transcript:Stat1-004 Uniprot/SPTREMBL:Q99K94 UCSC:uc007axz.1 Fantom:A330045H06 Fantom:F830208J20 EMBL:AC123752 EMBL:AK039458 EMBL:AK157263 EMBL:BC004808 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-004 Vega_translation:179233 Vega_translation:OTTMUSP00000066945 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAH04808.1 protein_id:BAC30355.1 protein_id:BAE34017.1 OTTP:OTTMUSP00000066945 OTTT:OTTMUST00000121557 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E88D3
definition	note : transcript_id=ENSMUST00000186574 protein_id : ENSMUSP00000140518 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS56628.1 RefSeq_peptide:NP_001192243 RefSeq_peptide:NP_033309 RefSeq_mRNA:NM_001205314.1 RefSeq_mRNA:NM_009283.4 Vega_transcript:OTTMUST00000121361 Vega_transcript:Stat1-001 Uniprot/SPTREMBL:Q8C3V4 UCSC:uc007aya.2 Fantom:D430002O20 EMBL:AC123752 EMBL:AK084855 EMBL:CH466548 GO:GO:0000790 GO:GO:0000790 GO:GO:0000978 GO:GO:0000978 GO:GO:0000979 GO:GO:0000979 GO:GO:0000983 GO:GO:0000983 GO:GO:0001937 GO:GO:0001937 GO:GO:0003690 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005164 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005654 GO:GO:0005730 GO:GO:0005730 GO:GO:0005737 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0033209 GO:GO:0034240 GO:GO:0035456 GO:GO:0035458 GO:GO:0035458 GO:GO:0042802 GO:GO:0042802 GO:GO:0042803 GO:GO:0042803 GO:GO:0043124 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045893 GO:GO:0045944 GO:GO:0045944 GO:GO:0046725 GO:GO:0046725 GO:GO:0048471 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-001 Vega_translation:179234 Vega_translation:OTTMUSP00000066906 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:BAC39293.1 protein_id:EDK99968.1 OTTP:OTTMUSP00000066906 OTTT:OTTMUST00000121361 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E9E98
definition	note : transcript_id=ENSMUST00000070968 protein_id : ENSMUSP00000066743 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121558 Vega_transcript:Stat1-007 Uniprot/SPTREMBL:Q99K94 UCSC:uc007axz.1 Fantom:A330045H06 Fantom:F830208J20 EMBL:AC123752 EMBL:AK039458 EMBL:AK157263 EMBL:BC004808 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-007 Vega_translation:179235 Vega_translation:OTTMUSP00000066946 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAH04808.1 protein_id:BAC30355.1 protein_id:BAE34017.1 OTTP:OTTMUSP00000066946 OTTT:OTTMUST00000121558 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E88D3
definition	note : transcript_id=ENSMUST00000191435 protein_id : ENSMUSP00000139746 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS56628.1 RefSeq_mRNA_predicted:XM_006495811.2 RefSeq_peptide_predicted:XP_006495874.1 Vega_transcript:OTTMUST00000121559 Vega_transcript:Stat1-006 Uniprot/SPTREMBL:Q8C3V4 UCSC:uc007aya.2 UCSC:uc007ayb.2 Fantom:D430002O20 EMBL:AC123752 EMBL:AK084855 EMBL:CH466548 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-006 Vega_translation:179236 Vega_translation:OTTMUSP00000066947 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:BAC39293.1 protein_id:EDK99968.1 OTTP:OTTMUSP00000066947 OTTT:OTTMUST00000121559 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E9E98
definition	note : transcript_id=ENSMUST00000186857 protein_id : ENSMUSP00000140875 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121561 Vega_transcript:Stat1-008 Uniprot/SPTREMBL:Q99K94 UCSC:uc007axz.1 Fantom:A330045H06 Fantom:F830208J20 EMBL:AC123752 EMBL:AK039458 EMBL:AK157263 EMBL:BC004808 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-008 Vega_translation:179238 Vega_translation:OTTMUSP00000066949 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAH04808.1 protein_id:BAC30355.1 protein_id:BAE34017.1 OTTP:OTTMUSP00000066949 OTTT:OTTMUST00000121561 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E88D3
definition	note : transcript_id=ENSMUST00000189347 protein_id : ENSMUSP00000141125 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001192242 RefSeq_mRNA:NM_001205313.1 Vega_transcript:OTTMUST00000121564 Vega_transcript:Stat1-009 Uniprot/SPTREMBL:A0A087WSP5 UCSC:uc007ayc.2 EMBL:AC123752 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-009 Vega_translation:179239 Vega_translation:OTTMUSP00000066950 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 OTTP:OTTMUSP00000066950 OTTT:OTTMUST00000121564 UniParc:UPI0000564534
definition	note : transcript_id=ENSMUST00000186057 protein_id : ENSMUSP00000141132 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLEVFVPFQTTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121566 Vega_transcript:Stat1-010 Uniprot/SPTREMBL:Q8CFQ1 UCSC:uc007ayd.2 EMBL:AC123752 EMBL:BC042551 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-010 Vega_translation:179240 Vega_translation:OTTMUSP00000066951 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAH42551.1 OTTP:OTTMUSP00000066951 OTTT:OTTMUST00000121566 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E8F99
definition	note : transcript_id=ENSMUST00000189244 protein_id : ENSMUSP00000140482 translation : NQTNRQQHGGAHLSSQAGGVGGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121567 Vega_transcript:Stat1-015 Uniprot/SPTREMBL:A0A087WRI1 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-015 Vega_translation:179241 Vega_translation:OTTMUSP00000066952 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 OTTP:OTTMUSP00000066952 OTTT:OTTMUST00000121567 UniParc:UPI0004621122
definition	codon_start : 3 note : transcript_id=ENSMUST00000189336 protein_id : ENSMUSP00000140643 translation : XKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVR

name
type	STS
link
xref	UniSTS_NUM:161506 UniSTS:RH124684
definition	note : map_weight=1 standard_name : RH124684

name
type	misc_feature
link
xref
definition	note : contig AC123752.8 1..184183(-1)

name	Gm28177 (ENSMUSG00000101628)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121556 Vega_transcript:OTTMUST00000121556 Clone_based_vega_transcript:RP24-194N4.4-001 MGI_trans_name:Gm28177-001 OTTT:OTTMUST00000121556
definition	note : processed_transcript note : transcript_id=ENSMUST00000185516

name	Stat1 (ENSMUSG00000026104)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121565 Vega_transcript:OTTMUST00000121565 MGI_trans_name:Stat1-014 OTTT:OTTMUST00000121565
definition	note : retained_intron note : transcript_id=ENSMUST00000189075

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Stat1 (ENSMUSG00000026104)
Transcript ID	ENSMUST00000189244

Reports
substitution
cSNPs	6
Insertion	12
Deletion	7
SNPs	-1kb 52145979(c.-4279C>T), 52146061(c.-4197A>T), 52146412(c.-3846A>T), 52146465(c.-3793T>G), 52146471(c.-3787A>G), 52146633(c.-3625A>G), 52146634(c.-3624C>T), 52146731(c.-3527A>T), 52146874(c.-3384G>A), 52146958(c.-3300C>G), 52147011(c.-3247C>T), 52147126(c.-3132A>G), 52147359(c.-2899C>T), 52147511(c.-2747A>T), 52147516(c.-2742C>T), 52147589(c.-2669G>A), 52147757(c.-2501G>A), 52148421(c.-1837G>A), 52148510(c.-1748C>T), 52148511(c.-1747A>G), 52148821(c.-1437A>G), 52148822(c.-1436C>G), 52149249(c.-1009A>G), 52149291(c.-967A>C), 52149371(c.-887A>G), 52149439(c.-819C>T), 52149478(c.-780G>A), 52149496(c.-762A>G), 52149541(c.-717C>G), 52149700(c.-558A>G), 52149723(c.-535T>C), 52149772(c.-486T>C), 52149814(c.-444C>T), 52149847(c.-411A>G), 52149885(c.-373G>T), 52149886(c.-372T>C), 52150205(c.-53C>G), 5'UTR CDS 52150280(c.23A>G), 52150290(c.33G>A), 52152311(c.288A>G), 52153860(c.372C>T), 52153884(c.396A>G), 52156064(c.699C>T), 3'UTR 52159415(c.118G>A), 52159417(c.120A>G), 52159667(c.370T>C), 52160081(c.784A>G), 52160125(c.828A>C), 52160350(c.1053T>C), 52160355(c.1058A>G), 52160563(c.1266C>A), 52160587(c.1290T>C), 52161042(c.1745G>A), 52161146(c.1849C>T), 52161269(c.1972A>T), 52161316(c.2019G>A), 52161341(c.2044C>A), 52161487(c.2190A>G), 52161597(c.2300G>C), 52161627(c.2330A>G), INTRON 52150441(c.64+120T>C), 52150446(c.64+125C>T), 52150469(c.64+148C>T), 52150481(c.65-138C>G), 52150533(c.65-86C>T), 52150917(c.114+249A>G), 52150948(c.114+280T>C), 52150960(c.115-278C>G), 52150972(c.115-266A>C), 52151144(c.115-94A>G), 52151197(c.115-41C>A), 52151414(c.209+82G>A), 52151691(c.209+359C>T), 52151722(c.209+390A>G), 52151837(c.210-396G>T), 52151891(c.210-342G>A), 52151902(c.210-331G>C), 52151903(c.210-330C>A), 52151980(c.210-253A>G), 52152012(c.210-221A>G), 52152025(c.210-208G>T), 52152026(c.210-207T>G), 52152030(c.210-203T>C), 52152079(c.210-154C>T), 52152447(c.355+69G>A), 52152751(c.355+373A>G), 52152765(c.355+387G>T), 52152771(c.355+393A>G), 52152922(c.355+544T>A), 52152994(c.355+616A>G), 52153110(c.355+732T>A), 52153120(c.356-724G>A), 52153208(c.356-636A>T), 52153255(c.356-589G>A), 52153324(c.356-520G>A), 52153816(c.356-28C>T), 52154392(c.541+363C>G), 52154587(c.542-399A>G), 52154624(c.542-362T>C), 52154627(c.542-359A>T), 52154636(c.542-350A>G), 52154678(c.542-308C>T), 52154739(c.542-247A>G), 52154844(c.542-142C>A), 52154933(c.542-53G>A), 52154937(c.542-49C>A), 52155366(c.617+305G>A), 52155498(c.617+437A>G), 52155869(c.618-114T>C), 52155933(c.618-50G>A), 52156092(c.717+10A>G), 52156267(c.717+185G>C), 52156345(c.717+263G>A), 52156462(c.717+380G>A), 52156627(c.717+545C>G), 52156638(c.717+556T>C), 52156701(c.717+619A>T), 52156757(c.717+675T>C), 52156807(c.717+725G>T), 52156850(c.717+768A>G), 52156936(c.717+854G>A), 52157046(c.717+964C>A), 52157062(c.717+980C>T), 52157139(c.717+1057T>A), 52157305(c.717+1223G>A), 52157855(c.718-1428T>G), 52157860(c.718-1423T>A), 52158057(c.718-1226G>C), 52158598(c.718-685T>C), 52158662(c.718-621C>T), 52158781(c.718-502C>T), 52159116(c.718-167T>C), +1kb 52162493(c.3196T>C), 52162597(c.3300A>G), 52162698(c.3401C>T), 52162760(c.3463C>T), 52163037(c.3740C>T), 52163104(c.3807C>T), 52163105(c.3808G>A), 52163384(c.4087G>A), 52163841(c.4544A>G), 52163870(c.4573C>G), 52163925(c.4628G>A), 52163954(c.4657A>G), 52164021(c.4724C>T), 52164184(c.4887G>A), 52164248(c.4951A>G), 52164329(c.5032G>A), 52164429(c.5132T>G), 52164433(c.5136G>A), 52164437(c.5140G>A), 52164463(c.5166A>G), 52164464(c.5167G>T), 52164481(c.5184G>A), 52164484(c.5187A>G), 52164657(c.5360G>A), 52164696(c.5399C>T), 52165007(c.5710A>C), 52165042(c.5745G>A), 52165316(c.6019T>C), 52165383(c.6086G>C), 52165435(c.6138A>T), 52165516(c.6219A>G), 52165539(c.6242T>C), 52165607(c.6310C>T), 52165833(c.6536G>A), 52165866(c.6569G>A), 52166106(c.6809G>A), 52166148(c.6851G>A), 52166163(c.6866G>A), 52166170(c.6873G>A), 52166198(c.6901C>T), 52166373(c.7076G>A), 52166759(c.7462C>T), 52166814(c.7517G>T),
Insertions	-1kb 52148558 (c.-1700_-1699insTCCC), 52148592 (c.-1666_-1665insC), 52148596 (c.-1662dupC), 52149431 (c.-827_-826insG), 52149527 (c.-731_-730insGG), 52149747 (c.-512_-511dupTT), 52150189 (c.-69_-68insTG), 5'UTR CDS 3'UTR INTRON 52150382 (c.64+61_64+62insGA), 52151793 (c.210-440dupA), 52151808 (c.210-424_210-423insAGAA), 52153565 (c.356-279_356-278insAC), 52157116 (c.717+1036_717+1037dupGT), +1kb
Deletions	-1kb 52149714 (c.-543_-542delTT), 5'UTR CDS 3'UTR 52159386 (c.98_101delAAGA), 52160070 (c.*782delT), INTRON 52150389 (c.64+73delG), 52150393 (c.64+74_64+75delTG), 52152495 (c.355+118_355+119delTG), 52156420 (c.717+339delA), +1kb
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	5
non-synonymous num	1
synonymous substitutions	52150290 (p.Ala11Ala), 52152311 (p.Arg96Arg), 52153860 (p.Ala124Ala), 52153884 (p.Glu132Glu), 52156064 (p.Gly233Gly),
non-synonymous substitutions	52150280 (p.His8Arg),
B6 transcript (ENSMUST00000189244)	NQTNRQQHGGAHLSSQAGGVGGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIK KHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEP DFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKE APEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMM STV*
MSMv4 transcript	NQTNRQQRGGAHLSSQAGGVGGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIK KHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEP DFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKE APEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMM STV*
homology	99.59 (244 / 244)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Stat1 (ENSMUSG00000026104)
Transcript ID	ENSMUST00000189244


..........TAAATTATGAGCCTGAAATAAGATATTGATGAGCAAGATGAGCTCTTAAC
GTCCTTAGAAGTAAAAGAGGAAAGTCCCTTACATAATAAAGTTCTGGGCTTAAAAACCCC
AGGGTCTTGTGCTGGCTGGGCCCTTGTTGCAGGAGGCAGAGCCACAGTTTTGTCTGATCA
GGCATCTGGCCCGTGGCAGACAGTTCTCTCTCAGTGGCTAATGTCAGAAGACTTATTCAT
CTTCTACAGTGAAAAGTCAAAGCCTCCCTTATCACCGACAACCTGCCAATGAAGCGGATA
TCTGAAGCATGTCTTTAAAATTCCATCAATACCGTTGTCCAGGTTTGCGGTCTGTGTAGC
AGGGTGATGCAGACGGTAGTCGAAGTGGGTCTTTCTTAACTGAATGTCCCTGGAAGGGTC
TTCACTCACTTGTGCACATTAACAAGGGTCTCGGACCTTGTTCTGTATTCCACATTTGGT
GAGATACAAGGATTTTTTTTTCCCTGCTTGTTGTAGCGTATCAGCGGTTTCCCTTAAACA
AAGTAGTGGACTTAACACAGCTCAGATCACATGCTGCATTAATTCATATGGCTAATTATG
TTTATGGCTTGTATCAGTTTGAACAACTGTCCAATTTTCGAGAAGGCTGAGGGATATATC
TAAGTACAGTGAGCTTATAAAATCCACCGGAGATCTCGGCCTTATTTGGAACTGCACATT
TGTTCTGCAGGGCTTTTGGTGGGGAGGGACTTCATGTAGGCAGAGGAACAGCGGGAAGTG
GTGCTGGGTAGAGACAAGGGTGGCTTCTCCACAGAGCCTTCAGGGAGACAGGGGTCATGC
CAAAGTCAGATCAGCCTGGAAGGGCGTGTCCTGGGGTGGGGTTTATAGAGCTCTGCCTGC
TCTCTGGGAAAGGAGCTAAGAGGCACCAGATGGCTGGCTTGATGTCAGCTTCCTCTGGGC
TTTCATAATCCGATCTCAGTAATCCTCCATGCATTCCTTCATGCTGTTGG
AATCAAACCAACAGACAGCAGCGTGGTGGTGCACATCTGTCATCTCAGGCTGGCGGAGTCGGAG
GCAAGGATGGGAAGCAAGGAGTTTG..........TGTTCGTTTTTGTGTTTGTTTCTAG
GCCCTAATGCTGGCCCTGATGGTCTTATTCCATGGACAAGGTTTTGTAAG
GTGGGTCCTCCCTGGGTTGTTTGCT..........CAATTGTGCATTTGTATACTTGCAG
GAAAATATTAATGATAAAAATTTCTCCTTCTGGCCTTGGATTGACACCATCCTAGAGCTCATTAAGAAGCACCTGCTGTGCCTCTGGAATGATGG
GTAAGCGTCCCTGAGCGCTCCGAAG..........CTCCATTCATCTCTTTAATACCCAG
GTGCATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTTAGGTTCAGTGAGAGCTCCCGGGAAGGGGCCATCACATTCACATGGGTGGAACGGTCCCAGAACGGAGGTG
GTGAGTGAAGGGTCTCCCTCATGCC..........GACCTCACTGGTTTCCTCCTTGTAG
AACCTGACTTCCATGCTGTGGAGCCCTACACGAAAAAAGAGCTTTCAGCTGTTACTTTCCCAGATATTATTCGCAACTACAAAGTCATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAGTATCTGTACCCCAATATTGACAAAGACCACGCCTTTGGGAAGTATTATTCCAGACCAAAGGAAG
GTGAGTGCCTGAGCGATCTGGGGTG..........GTGTACACGGTGTGCTTGCTCGTAG
CACCAGAACCGATGGAGCTTGACGACCCTAAGCGAACTGGATACATCAAGACTGAGTTGATTTCTGTGTCTGAAGT
GTAAGTGAGCACAGAAGACTGGCTT..........CTGTCCTTTCCCCTCTCTGTTCCAG
CCACCCTTCTAGACTTCAGACCACAGACAACCTGCTTCCCATGTCTCCAGAGGAGTTTGATGAGATGTCCCGGATAGTGGGTCCCGAATTTGACAGTATG
GTGAGTACTGTGGCAGGGGTATTTC..........CCTACCTACATTCTGTCTCTTGCAG
ATGAGCACAGTATAAACACGAATTTCTCTCTGGCGACATTTTTTTCCCATCTGTGATTCCTTCCTGCTACTGTTCCTTCATATGCAGTATTTCTAGGGAAATGCAAGAAAGAAAGAGCATCACATTTGCTGAACGCTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAAATGGAAAGTCACTTAACACAAAATGGATTTTGTAAACAAAGACCAAGAGATCCACCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTGTAATCAGTGCCCAAGTGCTGCACATCACTGGAAAGAGACATACTTACGGGGGAGGGGCCTTCTTGATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCCACTGTTTTACATATGGCACAGTTCAAAGTCAACTTTAGATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACTGCAGCTTCTGCCAAGGCATGGTTGCTCTCCTCAGGGACTAGCTTTGTTGGTGGCAATGGCTACACAAAACTAAACACCAACAGAAGTAAGACCATTTTCATGAGTACTCCATCAAGTTAAAGGGTTTTTGTTGTCTTTTTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTTTCTTAAAGCAATTTTTCTTTTTTTTTAACTAAAATTAGATATAGGTGAACTCATGTTTTTTAGTGGGCTGACCTTATCGGTTTTAGCTGGTTGTCTTAATTAGCCATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATCAGATAATTTTATTATTTTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTATTCTGGAACTCACTCTGTAGATCAGGCTGGCCTGGAACTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTATAAATGCATGAGAACCACTGTTACTGATGAATGTGGTTTTTTGACAACTACATTCACAAATGGCCTGTCTTGTGTTTTGTCACCGTTTTGAGGGATGATGTTTTGTGGCACGTGTGTGATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTAACAGACTGCTGCGCAGCTGCACCCACAGTGCTGCCCCATAATACTGTTTCACTTTGGTGAAGATCAGCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCTTAGGGAAAACAGGGACGCAGAGGCCTGCCTCCTCTCTTTTCCATGCCAAAATGAAATGACCAAGAAACAAAACATTTAAAAAGTTGTTTCTAAATGCTGAGACCTAACCATTGCTTATATACTGTTGTCTGTTGAAACAGTTTGTTACAATTTCATTCTGTTGAACTAGGTGAGACTTTAAGAAATGTTGAAATTATGTTAATTTCCTATTATTATTTAATATAAAGATATTTAAAATGTCTAGTGTTATGAGTTGGTTTAATATATATCTCATGTATGTATCAGTCCTATTTTAAGCGCTTTTTAAAAAAGACTTGTTTAGGTATATATTTTATGTATATGGGTGTTTTATCTGAATATATGGACACCAGAAGAGAGCACTGGGTCCCATGAGACTACAGTCAAATGGGATCACAGTCAGATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTTAGGGCCTCTGGAAGAACAGCCAGTGCTTTTAACTGCTGAACCATCTCTTGGGACGCCTATGGGTCCTATTTTAAAGGAAGACCGATATTTCCCAAGTGTCACCCTTGCTTACTCTACTGCAGTCACAGGAACTATGGCAGTTTAAGGTAGGTCAGCGGGCAGGCCCAGCAGTGAGGCCTCTCTGAGGTAGAGGCATGGGGATCAGGCGTTTAGTCATTCAAGGCCGGCAGGGCTCCATGGGATCACATCCAAGTCAGGGCAAGACATCCACTTACACTTTCAGGTAGCTGCCTGTTAGACGTCACCAAGCATGTCCTAGCTTAAGTATGACGAGGATGGCGTTTTCTAAGTACAGAGCATATATGTAGCACTTGGGATAAGCTGATCTAGGGACTTCCTGAGGCGGCAGAGCTTAAAGTGGACTCCATTGACTGCTTGGAGACTACTGTGCAATGAAGGCATGTCTCAGTAAACAGAACAGACCTGTGGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAAGGATTTAGAAAATTCTTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCCGAGGGCATTATTTATCTGAAGGCATCTTTTGTTTAAGATTCATTCATTTGTTCCTCAAATATGTTCAGTGCCTGCCTTGCACCAGGCACTATTCTAGATGCGTTGAAGGCACTAATAAAAGAAATGCCTCACA
GTTGTAAGCGTAAGATGTTCTAAGACACTGGGCCATATGCTCAACATAGTCACTTTACCC
ATGAAAGCTTTGTAGGGATCTTGTGAAGCAAAAACAGCCAAAAGGGAGCTGGGGAGCTGG
GTCAGCAGCTCAGAGCACTTGTTGCTCTTGCAGTAGATTCAGGCTCAGCAGTCCCGCACC
CACAAGGATTCACGGTGGCTCACAATCATTTATAACTCCTGCTCCAGGGGATCTGATGCC
TTCTTCTGACCTCCATGGGCACCAGGCACTCACATGGACATACACACACAAATGCAAAAA
ACAATGGCCTTAATGACTACTAAGCCTAGACTCTCTTTTTTTTTTAGATTTATTTATTTA
TTTATTTATTATATGTGTGTACACTGTAGCTGTCTTCAGACACTCCAGAAGATGGCATCA
GATTTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCGGGAACT
TTGGAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTTGCCAGCCCCGCCTAGACTCT
TCTAACCCCAAACACATACACACCTGCTAACTTATGAACTCAGTCCTTTCACACGCAGAA
GCACCTAAGTGCCACCCAGTAAGTACATCCGTGGGCCATTTCCTTCAACGTCCATGGATT
ATGAACTTACTCATATAAAATCAACCTAACCTTCTAAAAGATACCACAAAAAGAGAATGA
TCAATATATTAACGAATGTAACTTTTCACTACTGGGGTTATCTGTGTGCTCCATCTGCAG
ATAAACATGTGTGCGGTAGGAGCTGACTTAGGTTTCAGAACTTAACAATGCAGCTGTCAT
GCCTGGCCCCAAAACTCACCTGAGAGGCTTTAGCCAGTTATGAGTAAGCTAATATGTGTA
AGTGAAGATGTTAGCTGTAACTCTGTGTTAGGGGTCAGGGAGACAATATGGGAGTAAGAG
TTCCATACTGTGGTCCGCTCTTGGATCCCATCTTCATCAG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TAAATTATGAGCCTGAAATAAGATATTGATGAGCAAGATGAGCTCTTAAC GTCCTTAGAAGTAAAAGAGGAAAGTCCCTTACATAATAAAGTTCTGGGCTTAAAAACCCC AGGGTCTTGTGCTGGCTGGGCCCTTGTTGCAGGAGGCAGAGCCACAGTTTTGTCTGATCA GGCATCTGGCCCGTGGCAGACAGTTCTCTCTCAGTGGCTAATGTCAGAAGACTTATTCAT CTTCTACAGTGAAAAGTCAAAGCCTCCCTTATCACCGACAACCTGCCAATGAAGCGGATA TCTGAAGCATGTCTTTAAAATTCCATCAATACCGTTGTCCAGGTTTGCGGTCTGTGTAGC AGGGTGATGCAGACGGTAGTCGAAGTGGGTCTTTCTTAACTGAATGTCCCTGGAAGGGTC TTCACTCACTTGTGCACATTAACAAGGGTCTCGGACCTTGTTCTGTATTCCACATTTGGT GAGATACAAGGATTTTTTTTTCCCTGCTTGTTGTAGCGTATCAGCGGTTTCCCTTAAACA AAGTAGTGGACTTAACACAGCTCAGATCACATGCTGCATTAATTCATATGGCTAATTATG TTTATGGCTTGTATCAGTTTGAACAACTGTCCAATTTTCGAGAAGGCTGAGGGATATATC TAAGTACAGTGAGCTTATAAAATCCACCGGAGATCTCGGCCTTATTTGGAACTGCACATT TGTTCTGCAGGGCTTTTGGTGGGGAGGGACTTCATGTAGGCAGAGGAACAGCGGGAAGTG GTGCTGGGTAGAGACAAGGGTGGCTTCTCCACAGAGCCTTCAGGGAGACAGGGGTCATGC CAAAGTCAGATCAGCCTGGAAGGGCGTGTCCTGGGGTGGGGTTTATAGAGCTCTGCCTGC TCTCTGGGAAAGGAGCTAAGAGGCACCAGATGGCTGGCTTGATGTCAGCTTCCTCTGGGC TTTCATAATCCGATCTCAGTAATCCTCCATGCATTCCTTCATGCTGTTGG
1	EXON 1	52,150,258	52,150,321	-	1	64	AATCAAACCAACAGACAGCAGCGTGGTGGTGCACATCTGTCATCTCAGGCTGGCGGAGTC GGAG
	INTRON 1 - 2	52,150,322	52,150,618			297	GCAAGGATGGGAAGCAAGGAGTTTG..........TGTTCGTTTTTGTGTTTGTTTCTAG
2	EXON 2	52,150,619	52,150,668	1	0	50	GCCCTAATGCTGGCCCTGATGGTCTTATTCCATGGACAAGGTTTTGTAAG
	INTRON 2 - 3	52,150,669	52,151,237			569	GTGGGTCCTCCCTGGGTTGTTTGCT..........CAATTGTGCATTTGTATACTTGCAG
3	EXON 3	52,151,238	52,151,332	0	2	95	GAAAATATTAATGATAAAAATTTCTCCTTCTGGCCTTGGATTGACACCATCCTAGAGCTC ATTAAGAAGCACCTGCTGTGCCTCTGGAATGATGG
	INTRON 3 - 4	52,151,333	52,152,232			900	GTAAGCGTCCCTGAGCGCTCCGAAG..........CTCCATTCATCTCTTTAATACCCAG
4	EXON 4	52,152,233	52,152,378	2	1	146	GTGCATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCC AGGGACGTTCCTGCTTAGGTTCAGTGAGAGCTCCCGGGAAGGGGCCATCACATTCACATG GGTGGAACGGTCCCAGAACGGAGGTG
	INTRON 4 - 5	52,152,379	52,153,843			1,465	GTGAGTGAAGGGTCTCCCTCATGCC..........GACCTCACTGGTTTCCTCCTTGTAG
5	EXON 5	52,153,844	52,154,029	1	1	186	AACCTGACTTCCATGCTGTGGAGCCCTACACGAAAAAAGAGCTTTCAGCTGTTACTTTCC CAGATATTATTCGCAACTACAAAGTCATGGCTGCCGAGAACATACCAGAGAATCCCCTGA AGTATCTGTACCCCAATATTGACAAAGACCACGCCTTTGGGAAGTATTATTCCAGACCAA AGGAAG
	INTRON 5 - 6	52,154,030	52,154,985			956	GTGAGTGCCTGAGCGATCTGGGGTG..........GTGTACACGGTGTGCTTGCTCGTAG
6	EXON 6	52,154,986	52,155,061	1	2	76	CACCAGAACCGATGGAGCTTGACGACCCTAAGCGAACTGGATACATCAAGACTGAGTTGA TTTCTGTGTCTGAAGT
	INTRON 6 - 7	52,155,062	52,155,982			921	GTAAGTGAGCACAGAAGACTGGCTT..........CTGTCCTTTCCCCTCTCTGTTCCAG
7	EXON 7	52,155,983	52,156,082	2	0	100	CCACCCTTCTAGACTTCAGACCACAGACAACCTGCTTCCCATGTCTCCAGAGGAGTTTGA TGAGATGTCCCGGATAGTGGGTCCCGAATTTGACAGTATG
	INTRON 7 - 8	52,156,083	52,159,282			3,200	GTGAGTACTGTGGCAGGGGTATTTC..........CCTACCTACATTCTGTCTCTTGCAG
8	EXON 8	52,159,283	52,161,863	0	-	2,581	ATGAGCACAGTATAAACACGAATTTCTCTCTGGCGACATTTTTTTCCCATCTGTGATTCC TTCCTGCTACTGTTCCTTCATATGCAGTATTTCTAGGGAAATGCAAGAAAGAAAGAGCAT CACATTTGCTGAACGCTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT CTGAAGGACTTCATGCATCTTACTGAAGGTGAAATGGAAAGTCACTTAACACAAAATGGA TTTTGTAAACAAAGACCAAGAGATCCACCCAAGCACCAGGACTAGAGTGCGAGTATTTGG GGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTGTAATCAGTGCCCAAGTGCTGCA CATCACTGGAAAGAGACATACTTACGGGGGAGGGGCCTTCTTGATGGAGGAATGTTTCTG TCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCCACTGTTTTAC ATATGGCACAGTTCAAAGTCAACTTTAGATCCAATGCTCTATCAAACTATAGTGGGCATC CTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACTGCAGCTTCTGCCAAGGCATGG TTGCTCTCCTCAGGGACTAGCTTTGTTGGTGGCAATGGCTACACAAAACTAAACACCAAC AGAAGTAAGACCATTTTCATGAGTACTCCATCAAGTTAAAGGGTTTTTGTTGTCTTTTTG GTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTTTCTTAAAGC AATTTTTCTTTTTTTTTAACTAAAATTAGATATAGGTGAACTCATGTTTTTTAGTGGGCT GACCTTATCGGTTTTAGCTGGTTGTCTTAATTAGCCATAAACTTGGAGAAAGCAGTGACT TCTTGAATCCTTAGCCAAATATGAGTATCAGATAATTTTATTATTTTTTTTTCGAGACAG GGTTTCTCTGTGTAGCCCTGGCTATTCTGGAACTCACTCTGTAGATCAGGCTGGCCTGGA ACTCAGAAATCCGCCTGTCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCAA TGCCTGGTGAGATAACTTTAAAGAACTCCCTATAAATGCATGAGAACCACTGTTACTGAT GAATGTGGTTTTTTGACAACTACATTCACAAATGGCCTGTCTTGTGTTTTGTCACCGTTT TGAGGGATGATGTTTTGTGGCACGTGTGTGATCACAGCCTGATGGTTCTGGTCGTGGGTT GGTTCTTCTGGGCCAGCTTTAACAGACTGCTGCGCAGCTGCACCCACAGTGCTGCCCCAT AATACTGTTTCACTTTGGTGAAGATCAGCCCACCTTACACCCCGAGTGCAGGTGTGAACC ACGGTAAGTGTGCACAGTCCTTAGGGAAAACAGGGACGCAGAGGCCTGCCTCCTCTCTTT TCCATGCCAAAATGAAATGACCAAGAAACAAAACATTTAAAAAGTTGTTTCTAAATGCTG AGACCTAACCATTGCTTATATACTGTTGTCTGTTGAAACAGTTTGTTACAATTTCATTCT GTTGAACTAGGTGAGACTTTAAGAAATGTTGAAATTATGTTAATTTCCTATTATTATTTA ATATAAAGATATTTAAAATGTCTAGTGTTATGAGTTGGTTTAATATATATCTCATGTATG TATCAGTCCTATTTTAAGCGCTTTTTAAAAAAGACTTGTTTAGGTATATATTTTATGTAT ATGGGTGTTTTATCTGAATATATGGACACCAGAAGAGAGCACTGGGTCCCATGAGACTAC AGTCAAATGGGATCACAGTCAGATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGA ACTTAGGGCCTCTGGAAGAACAGCCAGTGCTTTTAACTGCTGAACCATCTCTTGGGACGC CTATGGGTCCTATTTTAAAGGAAGACCGATATTTCCCAAGTGTCACCCTTGCTTACTCTA CTGCAGTCACAGGAACTATGGCAGTTTAAGGTAGGTCAGCGGGCAGGCCCAGCAGTGAGG CCTCTCTGAGGTAGAGGCATGGGGATCAGGCGTTTAGTCATTCAAGGCCGGCAGGGCTCC ATGGGATCACATCCAAGTCAGGGCAAGACATCCACTTACACTTTCAGGTAGCTGCCTGTT AGACGTCACCAAGCATGTCCTAGCTTAAGTATGACGAGGATGGCGTTTTCTAAGTACAGA GCATATATGTAGCACTTGGGATAAGCTGATCTAGGGACTTCCTGAGGCGGCAGAGCTTAA AGTGGACTCCATTGACTGCTTGGAGACTACTGTGCAATGAAGGCATGTCTCAGTAAACAG AACAGACCTGTGGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAAGGATTTA GAAAATTCTTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCCGAGGGCATTATT TATCTGAAGGCATCTTTTGTTTAAGATTCATTCATTTGTTCCTCAAATATGTTCAGTGCC TGCCTTGCACCAGGCACTATTCTAGATGCGTTGAAGGCACTAATAAAAGAAATGCCTCAC A
	3' upstream sequence						GTTGTAAGCGTAAGATGTTCTAAGACACTGGGCCATATGCTCAACATAGTCACTTTACCC ATGAAAGCTTTGTAGGGATCTTGTGAAGCAAAAACAGCCAAAAGGGAGCTGGGGAGCTGG GTCAGCAGCTCAGAGCACTTGTTGCTCTTGCAGTAGATTCAGGCTCAGCAGTCCCGCACC CACAAGGATTCACGGTGGCTCACAATCATTTATAACTCCTGCTCCAGGGGATCTGATGCC TTCTTCTGACCTCCATGGGCACCAGGCACTCACATGGACATACACACACAAATGCAAAAA ACAATGGCCTTAATGACTACTAAGCCTAGACTCTCTTTTTTTTTTAGATTTATTTATTTA TTTATTTATTATATGTGTGTACACTGTAGCTGTCTTCAGACACTCCAGAAGATGGCATCA GATTTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCGGGAACT TTGGAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTTGCCAGCCCCGCCTAGACTCT TCTAACCCCAAACACATACACACCTGCTAACTTATGAACTCAGTCCTTTCACACGCAGAA GCACCTAAGTGCCACCCAGTAAGTACATCCGTGGGCCATTTCCTTCAACGTCCATGGATT ATGAACTTACTCATATAAAATCAACCTAACCTTCTAAAAGATACCACAAAAAGAGAATGA TCAATATATTAACGAATGTAACTTTTCACTACTGGGGTTATCTGTGTGCTCCATCTGCAG ATAAACATGTGTGCGGTAGGAGCTGACTTAGGTTTCAGAACTTAACAATGCAGCTGTCAT GCCTGGCCCCAAAACTCACCTGAGAGGCTTTAGCCAGTTATGAGTAAGCTAATATGTGTA AGTGAAGATGTTAGCTGTAACTCTGTGTTAGGGGTCAGGGAGACAATATGGGAGTAAGAG TTCCATACTGTGGTCCGCTCTTGGATCCCATCTTCATCAG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Stat1 (ENSMUSG00000026104)
Transcript ID	ENSMUST00000189244

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 244 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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