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Target CDS Information

Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Cross Reference
EMBL AC084389, AC123854
GO GO:0002682, GO:0003674, GO:0005575, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0008150
MGI_trans_name Tmem131-005
OTTP OTTMUSP00000068275
OTTT OTTMUST00000126156
UniParc UPI0004620FBB
Uniprot/SPTREMBL A0A087WQG5
Vega_transcript OTTMUST00000126156, Tmem131-005
Vega_translation 179002, OTTMUSP00000068275
Definition protein_id:ENSMUSP00000140187
translation:
QIRSLSEDVRFYYKRLRGNREDLEPGKKSKIANIYFDPGLQCGDHCYIGLPFLSKSEPKV
QPGVAMQEDLWDADWDAHQSLFKAWMGIKENAGHRNCFSRLNAMFEVNTDLQKNIVSKVS
AELSWPSVLSSPRLLKFPLTNTNCSSEEEISLENPADVPVYVQFIPLALYS

Chromosome 1
Length
Position(start - end)
3,231
36,815,920 - 36,819,152
Orient to Chromosome minus
Link Location : (1:36815920-36819152)
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Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000190442
Reports
substitution
cSNPs0
Insertion6
Deletion3
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num0
non-synonymous num0
synonymous substitutions
non-synonymous substitutions
B6 transcript
(ENSMUST00000190442)
QIRSLSEDVRFYYKRLRGNREDLEPGKKSKIANIYFDPGLQCGDHCYIGLPFLSKSEPKV
QPGVAMQEDLWDADWDAHQSLFKAWMGIKENAGHRNCFSRLNAMFEVNTDLQKNIVSKVS
AELSWPSVLSSPRLLKFPLTNTNCSSEEEISLENPADVPVYVQFIPLALYS
MSMv4 transcript
QIRSLSEDVRFYYKRLRGNREDLEPGKKSKIANIYFDPGLQCGDHCYIGLPFLSKSEPKV
QPGVAMQEDLWDADWDAHQSLFKAWMGIKENAGHRNCFSRLNAMFEVNTDLQKNIVSKVS
AELSWPSVLSSPRLLKFPLTNTNCSSEEEISLENPADVPVYVQFIPLALYS
homology100.00 (171 / 171)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000190442
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........TGGAGTTGGCAGCACCCGTATGGCAGCTTCTTGCTGTCTGTTCCCAGTTC
CTAACTCTGGCCGCTGCACTTGCCAGACATGCACACAGTGCACTTTACATGTGTACAGCC
AAAACATTCATACACATAGTTAAAACAAGCAAACCTTTTCAGAAGAATCTAATTTGTGTG
CTGTTTTGTCAGAGTCTTCAATGAGTTACTTGGTGTGTTTTTACTGTGAATTATTATTTT
GCAAGACAAGGACGTATGAGGCTCTGTCCTCTGGCCTTGATCATCCACATGCTGACAGTA
CAGGCATGTACCCCATGCCAGCTGATAGCCTACATTTTTTTTTAAAGATTTATTTATTTA
TTATATGTAAGTACACTGCAGCTGTCTTCAGACACTCCAGAAGAGGGCATCAGATCTTGT
TACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGA
GCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCGATAGCCTACATTTTTAAA
GAGATTTAATTTTCTCTTGGATGGCAAAAATTACTGTTGTATTTCTAAGGAAAACATTTT
CTTTTAAAGAATGTGTTTCGGCCTTCCTTGGTTAGATTTTAGAATTCATTTATTTTGGGG
CAGCCTTGCCTTGGTGTTAGCAGACTTTACATTACAAACAAAGCGACCCTCTAAAGCCCC
CTCTGCGCCTTCCTGGGTACTTAGTATGTCAACACAAGTTAAATTCCCATTAGTTTATAA
CAGTACTTCTGTAACATGCACGATGGCACCAGTGAAAAAGCTGGCCTGTGATCTCAGGTC
TTCAGATTTGCTGGTTCTCATTTGAATGAGGGCATGGATTTTCGTATCAGTTATAATTTT
AAAAGGTCGATTGATGAAAATTCTGAACTTGTGTTTTCTTCTTTCAGGGGAAAATAGTTC
ATCAGAGCTTAAATATTATGAATTCCTTCTCACAGAAGGTGAAGATACAG
1 EXON 1 36,819,063 36,819,152 - 0 90
CAAATAAGGTCTTTGTCAGAAGACGTACGATTCTACTACAAACGATTACGGGGTAATAGG
GAAGACTTGGAGCCAGGGAAGAAGTCTAAG
INTRON 1 - 2 36,818,969 36,819,062 94
GTTTGTTAGAAATGAGAATTTCCAG..........ATGGTCGTCCTGTGTTCCTTTACAG
2 EXON 2 36,818,893 36,818,968 0 1 76
ATTGCAAACATTTATTTTGACCCTGGGCTGCAGTGTGGGGATCACTGCTATATCGGCTTG
CCTTTCCTATCCAAAT
INTRON 2 - 3 36,818,776 36,818,892 117
GTAAGTCTTCCATCCCGCCTTCCTT..........TGCTGACTTGTGCTTCCTCTTTTAG
3 EXON 3 36,818,658 36,818,775 1 2 118
CTGAACCCAAAGTACAGCCTGGGGTGGCCATGCAGGAGGACTTGTGGGATGCCGACTGGG
ACGCACATCAGAGCTTGTTCAAGGCTTGGATGGGGATAAAGGAAAACGCAGGACATAG
INTRON 3 - 4 36,816,263 36,818,657 2,395
GTATGAGCTTCTGCTTCATTCAGGA..........GTGTAGAGAACATTCACTGACATAG
4 EXON 4 36,816,109 36,816,262 2 0 154
AAATTGCTTTTCTAGGTTGAATGCTATGTTTGAAGTAAATACAGATCTTCAGAAAAATAT
CGTATCAAAAGTCAGTGCCGAGCTCTCCTGGCCGTCTGTCCTTAGCTCGCCCCGGCTCCT
GAAGTTCCCACTCACTAACACAAACTGTTCTTCG
INTRON 4 - 5 36,815,997 36,816,108 112
GTAAGTGTTCAAATGGCCTAAACAG..........TAATGCATCTGGGCTTTGCTTTAAG
5 EXON 5 36,815,920 36,815,996 0 - 77
GAAGAAGAGATTAGCTTAGAAAACCCTGCAGACGTCCCTGTCTACGTCCAGTTCATCCCA
CTGGCTTTGTATTCCAA
3' upstream sequence
CCCCTCCGTCTTTGCAGATAAGCTAGTCTCAAGGTAAGCACTCCTTAGCTGGTCAAAGGG
TAAACGCAGAGTCTGGCTTTATGGCTGAAGTTGCCAGCAGTTTCCTGGGAGTGGATTGGT
ATTGAATTGAACATGAAGAAAAGCTTTCAACAGGTGTAAATGGGGTGCTCACATTTAACA
GATTTGTAAAGGGACAACAGACAAAATAATTCCACTAGTTCCTTTTTAAAAGTGAACAAG
GTATTAATTATAAGTTAGCCTTTAGTATTAATATGGTATAATGCTACTGGTCCCAAGACC
TGACAAAAGATAAATTTGCAAATAAAACCTCAAGTTTGGCTATCCTCCATAGTTCCTAGT
TGTGATGTTTATGAAGATAAACGTGTTTTTTATTTTAGGTTTAACTTGAGTAAGGTGGCC
AAGCTAGATTTGAGAACACTTGAATTCCAAGTCTACAGGAACAGCGTAAGTACAACAATC
ATTTACTCTGCTAGGACCAGGGCCAATGGGAAGGACACCTGCGGGCTGCCCTTAGCCTGG
CTGAAGGCAGCTATTGCAGTCCAGGAATTGACTTAGAGGCAGAGGAGAGCAGGAAGAGTC
AGGGCTGCAGATACACAGGGTATGTTAGACGGTTCCTCTTTGTGGGTATTAACCTTAGAG
TCAGCAGTCAGCCCACGATAGCTCAGCATAATGCCACCCAGAAAGTCTGAGGCTGTACAT
GAAATATGCTAATGCAACATTTTATTTTTAAGCGTTAAAAGATTCAACTGAGCTGGGCGT
GGTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGAGGCAGGTGGATTTCT
GAGTTCGAGGCCAGCCTGGTTTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGA
AACCCTGTCTCGAAAAACCAACCACCCCCCCTCCAAAAAAAAGATGCTTCCTGATAAAAT
TGTAAAACCAGTGAATGTGAGACCAGTACCTGGCACAGCT..........

Sequence Detail Report

Gene Symbol (Gene ID) Tmem131 (ENSMUSG00000026116)
Transcript ID ENSMUST00000190442
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 171 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information