MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Stat1 (ENSMUSG00000026104)

Cross Reference

EMBL	AC123752, AK039458, AK157263, ...show all
Fantom	A330045H06, F830208J20
GO	GO:0000790, GO:0000978, GO:0000979, ...show all
goslim_goa	GO:0000228, GO:0001071, GO:0002376, ...show all
MGI_trans_name	Stat1-007
OTTP	OTTMUSP00000066946
OTTT	OTTMUST00000121558
protein_id	AAH04808.1, BAC30355.1, BAE34017.1
Reactome	R-MMU-1059683, R-MMU-1169408, R-MMU-1169410, ...show all
UCSC	uc007axz.1

UniParc	UPI00000E88D3
Uniprot/SPTREMBL	Q99K94
Vega_transcript	OTTMUST00000121558, Stat1-007
Vega_translation	179235, OTTMUSP00000066946

Definition

protein_id:ENSMUSP00000139746
translation:

MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDL
LSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQ
RFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNR
EGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWK
RRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQV
LSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKV
KVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTN
EGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTE
PRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWT
RFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFL
LRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIP
ENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV

Chromosome

Length
Position(start - end)

32,470
52,122,594 - 52,155,065

Orient to Chromosome

plus

Link

Location : (1:52122594-52155065)
/

Detail Map

name	Gm28177 (ENSMUSG00000101628)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm28177 note : predicted gene 28177 [Source:MGI Symbol;Acc:MGI:5578883]

name	Stat1 (ENSMUSG00000026104)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Stat1 note : signal transducer and activator of transcription 1 [Source:MGI Symbol;Acc:MGI:103063]

name	Gm18301 (ENSMUSG00000099569)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm18301 note : predicted gene, 18301 [Source:MGI Symbol;Acc:MGI:5010486]

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186574

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000070968

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000191435

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186857

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000188681

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000189347

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186057

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000189244

name	Stat1 (ENSMUSG00000026104)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000189336

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121557 Vega_transcript:Stat1-004 Uniprot/SPTREMBL:Q99K94 UCSC:uc007axz.1 Fantom:A330045H06 Fantom:F830208J20 EMBL:AC123752 EMBL:AK039458 EMBL:AK157263 EMBL:BC004808 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-004 Vega_translation:179233 Vega_translation:OTTMUSP00000066945 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAH04808.1 protein_id:BAC30355.1 protein_id:BAE34017.1 OTTP:OTTMUSP00000066945 OTTT:OTTMUST00000121557 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E88D3
definition	note : transcript_id=ENSMUST00000186574 protein_id : ENSMUSP00000140518 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS56628.1 RefSeq_peptide:NP_001192243 RefSeq_peptide:NP_033309 RefSeq_mRNA:NM_001205314.1 RefSeq_mRNA:NM_009283.4 Vega_transcript:OTTMUST00000121361 Vega_transcript:Stat1-001 Uniprot/SPTREMBL:Q8C3V4 UCSC:uc007aya.2 Fantom:D430002O20 EMBL:AC123752 EMBL:AK084855 EMBL:CH466548 GO:GO:0000790 GO:GO:0000790 GO:GO:0000978 GO:GO:0000978 GO:GO:0000979 GO:GO:0000979 GO:GO:0000983 GO:GO:0000983 GO:GO:0001937 GO:GO:0001937 GO:GO:0003690 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005164 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005654 GO:GO:0005730 GO:GO:0005730 GO:GO:0005737 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0033209 GO:GO:0034240 GO:GO:0035456 GO:GO:0035458 GO:GO:0035458 GO:GO:0042802 GO:GO:0042802 GO:GO:0042803 GO:GO:0042803 GO:GO:0043124 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045893 GO:GO:0045944 GO:GO:0045944 GO:GO:0046725 GO:GO:0046725 GO:GO:0048471 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-001 Vega_translation:179234 Vega_translation:OTTMUSP00000066906 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:BAC39293.1 protein_id:EDK99968.1 OTTP:OTTMUSP00000066906 OTTT:OTTMUST00000121361 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E9E98
definition	note : transcript_id=ENSMUST00000070968 protein_id : ENSMUSP00000066743 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121558 Vega_transcript:Stat1-007 Uniprot/SPTREMBL:Q99K94 UCSC:uc007axz.1 Fantom:A330045H06 Fantom:F830208J20 EMBL:AC123752 EMBL:AK039458 EMBL:AK157263 EMBL:BC004808 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-007 Vega_translation:179235 Vega_translation:OTTMUSP00000066946 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAH04808.1 protein_id:BAC30355.1 protein_id:BAE34017.1 OTTP:OTTMUSP00000066946 OTTT:OTTMUST00000121558 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E88D3
definition	note : transcript_id=ENSMUST00000191435 protein_id : ENSMUSP00000139746 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS56628.1 RefSeq_mRNA_predicted:XM_006495811.2 RefSeq_peptide_predicted:XP_006495874.1 Vega_transcript:OTTMUST00000121559 Vega_transcript:Stat1-006 Uniprot/SPTREMBL:Q8C3V4 UCSC:uc007aya.2 UCSC:uc007ayb.2 Fantom:D430002O20 EMBL:AC123752 EMBL:AK084855 EMBL:CH466548 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-006 Vega_translation:179236 Vega_translation:OTTMUSP00000066947 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:BAC39293.1 protein_id:EDK99968.1 OTTP:OTTMUSP00000066947 OTTT:OTTMUST00000121559 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E9E98
definition	note : transcript_id=ENSMUST00000186857 protein_id : ENSMUSP00000140875 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121560 Vega_transcript:Stat1-012 Uniprot/SPTREMBL:A0A087WSQ5 UCSC:uc007axy.1 EMBL:AC123752 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-012 Vega_translation:179237 Vega_translation:OTTMUSP00000066948 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 OTTP:OTTMUSP00000066948 OTTT:OTTMUST00000121560 UniParc:UPI0004620FDE
definition	note : transcript_id=ENSMUST00000188681 protein_id : ENSMUSP00000141144 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVM

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121561 Vega_transcript:Stat1-008 Uniprot/SPTREMBL:Q99K94 UCSC:uc007axz.1 Fantom:A330045H06 Fantom:F830208J20 EMBL:AC123752 EMBL:AK039458 EMBL:AK157263 EMBL:BC004808 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-008 Vega_translation:179238 Vega_translation:OTTMUSP00000066949 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAH04808.1 protein_id:BAC30355.1 protein_id:BAE34017.1 OTTP:OTTMUSP00000066949 OTTT:OTTMUST00000121561 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E88D3
definition	note : transcript_id=ENSMUST00000189347 protein_id : ENSMUSP00000141125 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001192242 RefSeq_mRNA:NM_001205313.1 Vega_transcript:OTTMUST00000121564 Vega_transcript:Stat1-009 Uniprot/SPTREMBL:A0A087WSP5 UCSC:uc007ayc.2 EMBL:AC123752 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-009 Vega_translation:179239 Vega_translation:OTTMUSP00000066950 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 OTTP:OTTMUSP00000066950 OTTT:OTTMUST00000121564 UniParc:UPI0000564534
definition	note : transcript_id=ENSMUST00000186057 protein_id : ENSMUSP00000141132 translation : MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQRFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNREGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWKRRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQVLSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTNEGPLIVTEELHSLSFETQLCQPGLVIDLEVFVPFQTTSLPVVVISNVSQLPSGWASILWYNMLVTEPRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121566 Vega_transcript:Stat1-010 Uniprot/SPTREMBL:Q8CFQ1 UCSC:uc007ayd.2 EMBL:AC123752 EMBL:BC042551 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-010 Vega_translation:179240 Vega_translation:OTTMUSP00000066951 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAH42551.1 OTTP:OTTMUSP00000066951 OTTT:OTTMUST00000121566 Reactome:R-MMU-1059683 Reactome:R-MMU-1169408 Reactome:R-MMU-1169410 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-449147 Reactome:R-MMU-877300 Reactome:R-MMU-877312 Reactome:R-MMU-909733 Reactome:R-MMU-912694 Reactome:R-MMU-913531 UniParc:UPI00000E8F99
definition	note : transcript_id=ENSMUST00000189244 protein_id : ENSMUSP00000140482 translation : NQTNRQQHGGAHLSSQAGGVGGPNAGPDGLIPWTRFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVHPSRLQTTDNLLPMSPEEFDEMSRIVGPEFDSMMSTV

name	Stat1 (ENSMUSG00000026104) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121567 Vega_transcript:Stat1-015 Uniprot/SPTREMBL:A0A087WRI1 GO:GO:0000790 GO:GO:0000978 GO:GO:0000979 GO:GO:0000983 GO:GO:0001937 GO:GO:0003690 GO:GO:0003700 GO:GO:0004871 GO:GO:0005164 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0007259 GO:GO:0009617 GO:GO:0016525 GO:GO:0019221 GO:GO:0019899 GO:GO:0031663 GO:GO:0032496 GO:GO:0033209 GO:GO:0034240 GO:GO:0035458 GO:GO:0042802 GO:GO:0042803 GO:GO:0043124 GO:GO:0043330 GO:GO:0045893 GO:GO:0045944 GO:GO:0046725 GO:GO:0048471 GO:GO:0060333 GO:GO:0061326 GO:GO:0071222 MGI_trans_name:Stat1-015 Vega_translation:179241 Vega_translation:OTTMUSP00000066952 goslim_goa:GO:0000228 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0019899 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 OTTP:OTTMUSP00000066952 OTTT:OTTMUST00000121567 UniParc:UPI0004621122
definition	codon_start : 3 note : transcript_id=ENSMUST00000189336 protein_id : ENSMUSP00000140643 translation : XKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIPENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEVR

name
type	STS
link
xref	UniSTS_NUM:161506 UniSTS:RH124684
definition	note : map_weight=1 standard_name : RH124684

name
type	misc_feature
link
xref
definition	note : contig AC123752.8 1..184183(-1)

name	Gm28177 (ENSMUSG00000101628)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121556 Vega_transcript:OTTMUST00000121556 Clone_based_vega_transcript:RP24-194N4.4-001 MGI_trans_name:Gm28177-001 OTTT:OTTMUST00000121556
definition	note : processed_transcript note : transcript_id=ENSMUST00000185516

name	Stat1 (ENSMUSG00000026104)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121562 Vega_transcript:OTTMUST00000121562 MGI_trans_name:Stat1-013 OTTT:OTTMUST00000121562
definition	note : retained_intron note : transcript_id=ENSMUST00000186186

name	Stat1 (ENSMUSG00000026104)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121563 Vega_transcript:OTTMUST00000121563 MGI_trans_name:Stat1-005 OTTT:OTTMUST00000121563
definition	note : retained_intron note : transcript_id=ENSMUST00000185743

name	Stat1 (ENSMUSG00000026104)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121565 Vega_transcript:OTTMUST00000121565 MGI_trans_name:Stat1-014 OTTT:OTTMUST00000121565
definition	note : retained_intron note : transcript_id=ENSMUST00000189075

name	Gm18301 (ENSMUSG00000099569)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121569 Vega_transcript:OTTMUST00000121569 Clone_based_vega_transcript:RP24-194N4.5-001 MGI_trans_name:Gm18301-001 OTTT:OTTMUST00000121569
definition	note : unprocessed_pseudogene note : transcript_id=ENSMUST00000185261

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Stat1 (ENSMUSG00000026104)
Transcript ID	ENSMUST00000191435

Reports
substitution
cSNPs	8
Insertion	34
Deletion	29
SNPs	-1kb 52114519(c.-8075G>T), 52114542(c.-8052G>A), 52114761(c.-7833A>G), 52114905(c.-7689G>A), 52115003(c.-7591G>A), 52115147(c.-7447A>G), 52115219(c.-7375A>G), 52115242(c.-7352T>G), 52115444(c.-7150A>G), 52115889(c.-6705A>G), 52115904(c.-6690C>T), 52115998(c.-6596A>G), 52116004(c.-6590G>A), 52116011(c.-6583T>C), 52116150(c.-6444T>C), 52116160(c.-6434C>A), 52116385(c.-6209A>C), 52116434(c.-6160T>C), 52116437(c.-6157T>C), 52116464(c.-6130C>A), 52116543(c.-6051T>A), 52116652(c.-5942T>A), 52116784(c.-5810A>C), 52116936(c.-5658C>G), 52117059(c.-5535A>G), 52117109(c.-5485T>C), 52117263(c.-5331C>T), 52117291(c.-5303G>A), 52117345(c.-5249T>G), 52117405(c.-5189A>G), 52117550(c.-5044A>G), 52117677(c.-4917C>T), 52117750(c.-4844C>G), 52117785(c.-4809A>C), 52117800(c.-4794T>G), 52117939(c.-4655A>T), 52118021(c.-4573C>T), 52118023(c.-4571A>G), 52118126(c.-4468T>C), 52118254(c.-4340A>G), 52118339(c.-4255T>A), 52118486(c.-4108C>T), 52118632(c.-3962G>T), 52118725(c.-3869A>G), 52118827(c.-3767T>A), 52118834(c.-3760A>C), 52118850(c.-3744G>A), 52118926(c.-3668T>C), 52118961(c.-3633G>A), 52119048(c.-3546C>A), 52119115(c.-3479G>C), 52119133(c.-3461C>T), 52119166(c.-3428G>A), 52119182(c.-3412C>T), 52119207(c.-3387G>C), 52119285(c.-3309C>T), 52119413(c.-3181T>C), 52119429(c.-3165T>C), 5'UTR CDS 52123159(c.174T>C), 52123171(c.186A>G), 52137380(c.735C>T), 52144110(c.1122T>A), 52147359(c.1329C>T), 52152311(c.1806A>G), 52153860(c.1890C>T), 52153884(c.1914A>G), 3'UTR 52119945(c.-169G>C), 52120020(c.-94A>C), 52155366(c.301G>A), INTRON 52119674(c.-203+70A>G), 52119739(c.-203+135T>A), 52119749(c.-203+145C>T), 52120492(c.-4+382T>C), 52120520(c.-4+410T>G), 52120556(c.-4+446A>G), 52120602(c.-4+492G>A), 52120608(c.-4+498A>C), 52120818(c.-4+708G>A), 52121041(c.-4+931T>A), 52121247(c.-4+1137T>C), 52121303(c.-4+1193C>G), 52121423(c.-3-1168C>T), 52121657(c.-3-934A>G), 52121687(c.-3-904A>G), 52121775(c.-3-816T>C), 52122391(c.-3-200A>G), 52122500(c.-3-91C>G), 52122518(c.-3-73G>C), 52122540(c.-3-51G>A), 52122576(c.-3-15A>G), 52122735(c.128+14G>A), 52122978(c.129-136A>G), 52123275(c.273+17A>T), 52123410(c.273+152A>C), 52123461(c.273+203T>A), 52123627(c.273+369A>G), 52123666(c.273+408C>T), 52123749(c.273+491C>G), 52123801(c.273+543C>G), 52123819(c.273+561C>T), 52123905(c.273+647A>G), 52123958(c.273+700A>C), 52124012(c.273+754G>A), 52124024(c.273+766C>A), 52124045(c.273+787G>A), 52124063(c.273+805C>T), 52124085(c.273+827G>T), 52124279(c.273+1021A>C), 52124333(c.273+1075T>C), 52124336(c.273+1078A>G), 52124351(c.273+1093T>C), 52124360(c.273+1102G>A), 52124431(c.273+1173A>T), 52124463(c.273+1205T>A), 52124517(c.273+1259T>A), 52124527(c.273+1269G>A), 52124590(c.273+1332A>G), 52124610(c.273+1352A>G), 52124686(c.273+1428C>T), 52124779(c.273+1521A>C), 52124854(c.273+1596T>C), 52124903(c.274-1617A>G), 52125163(c.274-1357T>C), 52125699(c.274-821A>C), 52125734(c.274-786T>C), 52125850(c.274-670C>T), 52125856(c.274-664G>A), 52125895(c.274-625A>G), 52126060(c.274-460G>A), 52126063(c.274-457C>A), 52126064(c.274-456A>G), 52126150(c.274-370A>G), 52126152(c.274-368A>G), 52126163(c.274-357A>G), 52126432(c.274-88G>C), 52126439(c.274-81T>A), 52126498(c.274-22A>G), 52126643(c.372+25G>A), 52126644(c.372+26T>C), 52126827(c.372+209C>A), 52126877(c.372+259A>G), 52126914(c.372+296C>G), 52126960(c.372+342A>G), 52127033(c.372+415T>G), 52127140(c.372+522C>T), 52127233(c.372+615G>C), 52127261(c.372+643G>C), 52129151(c.372+2533C>T), 52129186(c.372+2568G>A), 52129195(c.372+2577A>G), 52129328(c.372+2710C>T), 52129498(c.372+2880T>C), 52129503(c.372+2885C>T), 52129519(c.372+2901G>A), 52129713(c.373-2831C>T), 52129721(c.373-2823T>C), 52129781(c.373-2763T>C), 52129877(c.373-2667G>C), 52129891(c.373-2653C>A), 52130121(c.373-2423A>G), 52130202(c.373-2342T>A), 52130212(c.373-2332A>C), 52130534(c.373-2010T>A), 52130682(c.373-1862C>T), 52130687(c.373-1857T>A), 52130688(c.373-1856T>A), 52130814(c.373-1730A>G), 52130894(c.373-1650T>C), 52130895(c.373-1649T>C), 52131073(c.373-1471G>A), 52131266(c.373-1278T>A), 52131495(c.373-1049T>C), 52131645(c.373-899A>C), 52131869(c.373-675C>T), 52131883(c.373-661T>C), 52131916(c.373-628T>C), 52132206(c.373-338C>T), 52132284(c.373-260G>A), 52132367(c.373-177G>T), 52132378(c.373-166G>A), 52132442(c.373-102A>T), 52132642(c.462+9T>A), 52132650(c.462+17G>T), 52132680(c.462+47T>C), 52132720(c.462+87G>A), 52132771(c.462+138C>T), 52132772(c.462+139A>G), 52132833(c.462+200G>A), 52132868(c.462+235T>C), 52132874(c.462+241A>T), 52132891(c.462+258C>A), 52132903(c.462+270G>A), 52133006(c.462+373G>A), 52133065(c.462+432T>C), 52133355(c.462+722G>A), 52133362(c.462+729A>G), 52133433(c.462+800A>G), 52133455(c.462+822C>T), 52134463(c.463-1140T>C), 52134509(c.463-1094C>T), 52135026(c.463-577T>C), 52135124(c.463-479T>C), 52135127(c.463-476T>G), 52135791(c.541+110C>G), 52135845(c.541+164T>C), 52135866(c.541+185G>A), 52135972(c.541+291A>G), 52135983(c.541+302A>G), 52135984(c.541+303A>G), 52136035(c.541+354T>C), 52136201(c.541+520T>C), 52136235(c.541+554A>G), 52136250(c.541+569T>C), 52136442(c.542-437G>A), 52136447(c.542-432C>T), 52136607(c.542-272T>C), 52136617(c.542-262C>G), 52136635(c.542-244C>G), 52136646(c.542-233A>G), 52136779(c.542-100G>A), 52136979(c.633+9C>T), 52137090(c.633+120C>T), 52137091(c.633+121A>G), 52137092(c.633+122G>A), 52137133(c.634-146G>T), 52137141(c.634-138A>C), 52137194(c.634-85T>C), 52137270(c.634-9T>G), 52137560(c.785+130A>G), 52137603(c.785+173C>T), 52137689(c.785+259T>C), 52137799(c.785+369T>C), 52137819(c.785+389T>C), 52137938(c.785+508A>G), 52137971(c.785+541C>T), 52137989(c.785+559C>G), 52138002(c.785+572G>T), 52138029(c.785+599A>T), 52138041(c.785+611T>G), 52138332(c.786-862T>C), 52138358(c.786-836T>C), 52138596(c.786-598T>C), 52138725(c.786-469C>T), 52138729(c.786-465C>T), 52138782(c.786-412A>G), 52138852(c.786-342G>A), 52138910(c.786-284C>T), 52139043(c.786-151A>G), 52139360(c.944+8T>C), 52139369(c.944+17T>C), 52139594(c.944+242A>G), 52139601(c.944+249G>A), 52139647(c.944+295C>T), 52139736(c.944+384C>T), 52139737(c.944+385T>G), 52139986(c.945-591T>C), 52140045(c.945-532A>C), 52140142(c.945-435G>C), 52140171(c.945-406G>C), 52140253(c.945-324T>C), 52140329(c.945-248G>A), 52140403(c.945-174T>C), 52140554(c.945-23C>G), 52140784(c.1037+115G>T), 52140803(c.1037+134C>T), 52140860(c.1037+191G>T), 52141052(c.1037+383G>A), 52141062(c.1037+393G>A), 52141063(c.1037+394C>T), 52141225(c.1037+556G>A), 52141229(c.1037+560A>G), 52141333(c.1037+664A>G), 52141336(c.1037+667G>A), 52141345(c.1037+676C>G), 52141400(c.1037+731A>G), 52141443(c.1037+774G>A), 52141469(c.1037+800T>A), 52141516(c.1037+847T>C), 52141532(c.1037+863G>A), 52141556(c.1037+887A>G), 52141636(c.1037+967T>C), 52141770(c.1037+1101A>G), 52141824(c.1038-1077T>C), 52141828(c.1038-1073G>C), 52141844(c.1038-1057G>A), 52141879(c.1038-1022C>G), 52141906(c.1038-995A>G), 52141919(c.1038-982C>T), 52141969(c.1038-932A>G), 52142032(c.1038-869G>A), 52142049(c.1038-852C>T), 52142067(c.1038-834G>T), 52142987(c.1097+27T>A), 52142988(c.1097+28A>T), 52143112(c.1097+152T>C), 52143131(c.1097+171G>A), 52143135(c.1097+175A>C), 52143289(c.1097+329T>G), 52143333(c.1097+373G>A), 52143335(c.1097+375A>T), 52143348(c.1097+388G>A), 52143398(c.1097+438C>T), 52143399(c.1097+439G>A), 52143528(c.1098-558C>T), 52143533(c.1098-553T>C), 52143538(c.1098-548G>C), 52143539(c.1098-547G>A), 52143805(c.1098-281T>C), 52143941(c.1098-145T>C), 52143963(c.1098-123T>C), 52143980(c.1098-106C>T), 52144063(c.1098-23C>A), 52144174(c.1128-30C>T), 52144417(c.1221+120G>T), 52144781(c.1222-369T>C), 52144833(c.1222-317G>C), 52145017(c.1222-133A>G), 52145137(c.1222-13C>T), 52145979(c.1263+788C>T), 52146061(c.1263+870A>T), 52146412(c.1264-882A>T), 52146465(c.1264-829T>G), 52146471(c.1264-823A>G), 52146633(c.1264-661A>G), 52146634(c.1264-660C>T), 52146731(c.1264-563A>T), 52146874(c.1264-420G>A), 52146958(c.1264-336C>G), 52147011(c.1264-283C>T), 52147126(c.1264-168A>G), 52147511(c.1347+134A>T), 52147516(c.1347+139C>T), 52147589(c.1347+212G>A), 52147757(c.1348-144G>A), 52148421(c.1446+422G>A), 52148510(c.1447-393C>T), 52148511(c.1447-392A>G), 52148821(c.1447-82A>G), 52148822(c.1447-81C>G), 52149249(c.1582+211A>G), 52149291(c.1582+253A>C), 52149371(c.1582+333A>G), 52149439(c.1582+401C>T), 52149478(c.1582+440G>A), 52149496(c.1582+458A>G), 52149541(c.1582+503C>G), 52149700(c.1582+662A>G), 52149723(c.1582+685T>C), 52149772(c.1582+734T>C), 52149814(c.1582+776C>T), 52149847(c.1583-772A>G), 52149885(c.1583-734G>T), 52149886(c.1583-733T>C), 52150205(c.1583-414C>G), 52150280(c.1583-339A>G), 52150290(c.1583-329G>A), 52150441(c.1583-178T>C), 52150446(c.1583-173C>T), 52150469(c.1583-150C>T), 52150481(c.1583-138C>G), 52150533(c.1583-86C>T), 52150917(c.1632+249A>G), 52150948(c.1632+280T>C), 52150960(c.1633-278C>G), 52150972(c.1633-266A>C), 52151144(c.1633-94A>G), 52151197(c.1633-41C>A), 52151414(c.1727+82G>A), 52151691(c.1727+359C>T), 52151722(c.1727+390A>G), 52151837(c.1728-396G>T), 52151891(c.1728-342G>A), 52151902(c.1728-331G>C), 52151903(c.1728-330C>A), 52151980(c.1728-253A>G), 52152012(c.1728-221A>G), 52152025(c.1728-208G>T), 52152026(c.1728-207T>G), 52152030(c.1728-203T>C), 52152079(c.1728-154C>T), 52152447(c.1873+69G>A), 52152751(c.1873+373A>G), 52152765(c.1873+387G>T), 52152771(c.1873+393A>G), 52152922(c.1873+544T>A), 52152994(c.1873+616A>G), 52153110(c.1873+732T>A), 52153120(c.1874-724G>A), 52153208(c.1874-636A>T), 52153255(c.1874-589G>A), 52153324(c.1874-520G>A), 52153816(c.1874-28C>T), 52154392(c.2059+363C>G), 52154587(c.2060-399A>G), 52154624(c.2060-362T>C), 52154627(c.2060-359A>T), 52154636(c.2060-350A>G), 52154678(c.2060-308C>T), 52154739(c.2060-247A>G), 52154844(c.2060-142C>A), 52154933(c.2060-53G>A), 52154937(c.2060-49C>A), +1kb 52155498(c.433A>G), 52155869(c.804T>C), 52155933(c.868G>A), 52156064(c.999C>T), 52156092(c.1027A>G), 52156267(c.1202G>C), 52156345(c.1280G>A), 52156462(c.1397G>A), 52156627(c.1562C>G), 52156638(c.1573T>C), 52156701(c.1636A>T), 52156757(c.1692T>C), 52156807(c.1742G>T), 52156850(c.1785A>G), 52156936(c.1871G>A), 52157046(c.1981C>A), 52157062(c.1997C>T), 52157139(c.2074T>A), 52157305(c.2240G>A), 52157855(c.2790T>G), 52157860(c.2795T>A), 52158057(c.2992G>C), 52158598(c.3533T>C), 52158662(c.3597C>T), 52158781(c.3716C>T), 52159116(c.4051T>C), 52159415(c.4350G>A), 52159417(c.4352A>G), 52159667(c.4602T>C), 52160081(c.5016A>G), 52160125(c.5060A>C), 52160350(c.5285T>C), 52160355(c.5290A>G),
Insertions	-1kb 52115305 (c.-7289_-7288insA), 52119382 (c.-3212dupG), 5'UTR CDS 3'UTR INTRON 52119626 (c.-203+26_-203+31dupATCCGG), 52121544 (c.-3-1040dupA), 52125983 (c.274-537_274-536insACACC), 52127152 (c.372+537dupA), 52130597 (c.373-1947_373-1946insT), 52130656 (c.373-1883_373-1881dupAGA), 52130664 (c.373-1879_373-1878insGAA), 52130879 (c.373-1659dupT), 52136662 (c.542-217_542-216insC), 52137932 (c.785+502_785+503insT), 52137934 (c.785+506dupT), 52139851 (c.944+503dupC), 52141011 (c.1037+342_1037+343insATC), 52141375 (c.1037+707dupG), 52142007 (c.1038-894_1038-893insAAT), 52142562 (c.1038-330dupT), 52143509 (c.1097+555dupT), 52143515 (c.1097+555dupT), 52143653 (c.1098-433_1098-432insA), 52143655 (c.1098-431_1098-430insA), 52148558 (c.1447-345_1447-344insTCCC), 52148592 (c.1447-311_1447-310insC), 52148596 (c.1447-307dupC), 52149431 (c.1582+393_1582+394insG), 52149527 (c.1582+489_1582+490insGG), 52149747 (c.1582+709_1582+710dupTT), 52150189 (c.1583-428_1583-427dupGT), 52150382 (c.1583-237_1583-236insGA), 52151793 (c.1728-440dupA), 52151808 (c.1728-424_1728-423insAGAA), 52153565 (c.1874-279_1874-278insAC), +1kb 52157116 (c.2051_2052insTG),
Deletions	-1kb 52115576 (c.-7017delG), 52116423 (c.-6170delC), 52118974 (c.-3619_-3617delTGC), 5'UTR CDS 3'UTR INTRON 52122258 (c.-3-320_-3-319delAA), 52122544 (c.-3-46_-3-43delCGTC), 52123977 (c.273+720delT), 52124015 (c.273+758_273+759delTT), 52125363 (c.274-1156_274-1155delAT), 52126032 (c.274-483delG), 52126036 (c.274-483delG), 52128930 (c.372+2313delC), 52129094 (c.372+2480_372+2486delGCTATTT), 52131525 (c.373-1010_373-1004delTGATTGA), 52131763 (c.373-776delA), 52132393 (c.373-150_373-148delTTT), 52132442 (c.373-101_373-94delTAAGGTGG), 52137867 (c.785+438_785+441delAAAA), 52138700 (c.786-489delA), 52141361 (c.1037+693delG), 52141895 (c.1038-1005delT), 52143619 (c.1098-466_1098-465delGC), 52143964 (c.1098-115delC), 52149714 (c.1582+677_1582+678delTT), 52150389 (c.1583-225delG), 52150393 (c.1583-224_1583-223delTG), 52152495 (c.1873+118_1873+119delTG), +1kb 52156420 (c.1356delA), 52159386 (c.4322_4325delAAGA), 52160070 (c.5006delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	8
non-synonymous num	0
synonymous substitutions	52123159 (p.His58His), 52123171 (p.Ser62Ser), 52137380 (p.Ser245Ser), 52144110 (p.Val374Val), 52147359 (p.Gly443Gly), 52152311 (p.Arg602Arg), 52153860 (p.Ala630Ala), 52153884 (p.Glu638Glu),
non-synonymous substitutions
B6 transcript (ENSMUST00000191435)	MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDL LSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQ RFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNR EGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWK RRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQV LSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKV KVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTN EGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTE PRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWT RFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFL LRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIP ENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV*
MSMv4 transcript	MSQWFELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAAYDVSFATIRFHDL LSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPVQMSMIIYNCLKEERKILENAQ RFNQAQEGNIQNTVMLDKQKELDSKVRNVKDQVMCIEQEIKTLEELQDEYDFKCKTSQNR EGEANGVAKSDQKQEQLLLHKMFLMLDNKRKEIIHKIRELLNSIELTQNTLINDELVEWK RRQQSACIGGPPNACLDQLQSWFTIVAETLQQIRQQLKKLEELEQKFTYEPDPITKNKQV LSDRTFLLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKV KVSFDKDVNEKNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGNRTN EGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVTE PRNLSFFLNPPCAWWSQLSEVLSWQFSSVTKRGLNADQLSMLGEKLLGPNAGPDGLIPWT RFCKENINDKNFSFWPWIDTILELIKKHLLCLWNDGCIMGFISKERERALLKDQQPGTFL LRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAENIP ENPLKYLYPNIDKDHAFGKYYSRPKEAPEPMELDDPKRTGYIKTELISVSEV*
homology	100.00 (713 / 713)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Stat1 (ENSMUSG00000026104)
Transcript ID	ENSMUST00000191435


..........GCTCGAGGACCAAGTGTCCGGGACTAAATGGGCAACGTCTATGGCTTGGC
CCTCATCCGTTCCAGACTAAGACGGGGTATGAGGAGGAACCTGTGTTTTGAGTACAGTTG
GTTTACAGACTCAGTAGATATCCAAGGACAGGTTAACTGTGACACTTGGAAGAAAGCAGT
GGGTGTGTATACATCTAGGAGTGCTCCAGGACATGGAAGTTACAGGGACAGTCATCAAAG
GCACAGCGGGAGAAGGGTAGATAAGAGACTCACATTCTGGTTTAGTAGTTTAATAATGGA
GATGGGGGACAGAGGGATGTCCTGCGAGAAAGGAAGAAGCAAAGAGGACCTGTCCTCATG
ATGGCTAAGCAGGACAAAAGTTTCGGTAATGGAGGTGTCAATTGTGTAAAGCTTTATTTT
TCTTAAACATATTAGTTAGAATTATTCATTTTATTTCATGACATTTTTGTTTTGCTTGCG
TATATGTGTACTTCTTGCAGGCTTGGTTGACGTCAGTGGAGGTCCGAAGAGGGCACTAGA
CTCCTGGAACTGGAGTTGGGAACCATTAAGCAGGCACTGCAAATCCAAGCCCTGTCCTCT
GCAAGAGCAAGTTCTCTGTAGCTGCTGAGTTAAAGCCAAGTATTGAATGTTTTTAAATTG
GTAAATTAAGCTCCCTGGCTTTAGTAACGTGAAGGTTAATCTTTAGTCCCCAATTCTGAA
TCCCGCACTGATGCGCCTACTTAATGCAGGATCTCCAAGACTGAGCTTGCGCAAGCCTAT
AGTTTCCAACCTTGTAAACACAACCTCCTGTCTGCGGTTTGCACCGCACAGCGGCGCCCC
AAGTTTCGCACGCCGGGTAGGGAGCGCGCGGACCAGGAAGGCCAAGCAGCCGAGGGGGGG
GGGACGGTGCGCTGATGGAACAGCCGGCCAATCCCTGCCGCTGATTGGCCGAGGCGGAAG
GAGGCGGGACGCCCTCTAGCCTTTTTTCCTGCCCGGTACTTTCGGTTTTC
AGCGCCGAGTCTGTCAAAGCTCCCTGGAGACCTCCGGGACCGCGCCCCTCAGACCCACTTGGGACACTGCTGAGCGGCGCAGAGAGATTTGCCCAGACTCGAGCTCCTGCGTGCA
GTGAGTGAGTGAGAGCCAGGTGCGG..........CTGTAACATTTTCTTCTTTTTGCAG
TCGTTTCAGCTCTGCTCCATACCCTGAGCCGGCCCCACGCCGCCGCGCATGCAACTGGCATATAACTTGCTGTGTGTGGTGATTGCTTGTGTTGAATCCCGAACCTGCCCCCGGAGACAGCCCAGTAAGTCTACGTGGGAACGGAAGCATTTGGAATCTCAGTATGTATCAGCCCTTACCGGTTTTCTGAAACTTAAAG
GTGGTATTTAGGTTCCGCAGAACCA..........GTTCACACGCGTGTTCTTTCTGCAG
AGGATGTCACAGTGGTTCGAGCTTCAGCAGCTGGACTCCAAGTTCCTGGAGCAGGTCCACCAGCTGTACGATGACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCCAGTGGCTGGAAAAGCAAGACTG
GTAAGGAAAACTCACTGGCTAGGGA..........CAAAGCTAAATTCCCGCTGTTGTAG
GGAGCACGCTGCCTATGATGTCTCGTTTGCGACCATCCGCTTCCACGACCTCCTCTCGCAGCTGGACGACCAGTACAGCCGCTTTTCTCTGGAGAATAATTTCTTGTTGCAGCACAACATACGGAAAAGCAAGCGTAATCTCCAG
GTACGGACTGGCTTTGTGCCTCACT..........CACGGTATCGTCTCCAACAATCTAG
GATAACTTCCAAGAAGATCCCGTACAGATGTCCATGATCATCTACAACTGTCTGAAGGAAGAAAGGAAGATTTTGGAAAATGCCCAAAGATTTAATCAG
GTACTTGGTTCTCAGTGGACGCTAA..........GCTAACAGTGTGTTTCCCTTTAAAG
GCCCAGGAGGGAAATATTCAGAACACTGTGATGTTAGATAAACAGAAGGAGCTGGACAGTAAAGTCAGAAATGTGAAGGATCAAGTCATG
GTGAGTACAGACAGAATGCCTGCGT..........AACTCACTTATATCTTTATCTGCAG
TGCATAGAGCAGGAAATCAAGACCCTAGAAGAATTACAAGATGAATATGACTTTAAATGCAAAACCTCTCAGAACAGAG
GTAAGAGTCCCAACAGCACCCGTTG..........TTACTCCCTGTTCCTTCATTCACAG
AAGGTGAAGCCAATGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCTGCTGCTCCACAAGATGTTTTTAATGCTTGACAATAAGAGAAAG
GTAGCGACTGCTTCCCAGTCATGAG..........CACCTTGTTCTTCCTCGCCCTTTAG
GAGATAATTCACAAAATCAGAGAGTTGCTGAATTCCATCGAGCTCACTCAGAACACTCTGATTAATGACGAGCTCGTGGAGTGGAAGCGAAGGCAGCAGAGTGCCTGCATCGGGGGACCGCCCAACGCCTGCCTGGATCAGCTGCAAAGCTG
GTAAGGTTTTCCCCGGGGTGGAAGA..........GACCCCATGTCCTGTACCCTCCCAG
GTTCACCATTGTTGCAGAGACCCTGCAGCAGATCCGTCAGCAGCTTAAAAAGCTGGAGGAGTTGGAACAGAAATTCACCTATGAGCCCGACCCTATTACAAAAAACAAGCAGGTGTTGTCAGATCGAACCTTCCTCCTCTTCCAGCAGCTCATTCAGAG
GTAAGGCCAGGCAGACCGACTATCC..........ATGTGTGTTTCCGGGTCACTGACAG
CTCCTTCGTGGTAGAACGACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCTGGTCTTGAAGACTGGGGTACAGTTCACTGTCAAGCTGAG
GTAACGAACATAGAGCTCCATATGC..........TAACAACTGTTATTTTTCTTTCAAG
ACTGTTGGTGAAATTGCAAGAGCTGAACTATAACTTGAAAGTGAAAGTCTCATTTGACAA
GTAAGATTTCTGTAATCTTATCTAA..........TTAAAATTTACATATTTTTTTACAG
AGATGTGAACGAGAAAAACACAGTAAAAGG
GTAGGTATAGCATCTGCACCCTACT..........AGGATTTGTGTCTTGCGTTGTATAG
ATTTCGGAAGTTCAACATCTTGGGTACGCACACAAAAGTGATGAACATGGAAGAATCCACCAACGGAAGTCTGGCAGCTGAGTTCCGACACCTG
GTAGGCAGAGCAGTTTGATGTCTTG..........TGCCATTCGGTTTCTTCTTTTACAG
CAACTGAAGGAACAGAAAAACGCTGGGAACAGAACTAATGAG
GTGAGCATCTCTGGGTGGCTAGCGG..........AGCTCTTTTCTTTTTGTTTTGGAAG
GGGCCTCTCATTGTCACCGAAGAACTTCACTCTCTTAGCTTTGAAACCCAGTTGTGCCAGCCAGGTTTGGTGATTGACCTGGAG
GTAAGAGTTACAGTTTCCTGAGGGA..........TTCCAAGGTCTTTGTTCCCTTTCAG
ACCACCTCTCTTCCTGTCGTGGTGATCTCCAACGTCAGCCAGCTCCCCAGTGGCTGGGCGTCTATCCTGTGGTACAACATGCTGGTGACAGAGCCCAGG
GTATGGAAAACACATGTGCTTTAGT..........CAGCCTCTGGGTGTTTTCTCTGCAG
AATCTCTCCTTCTTCCTGAACCCCCCGTGCGCGTGGTGGTCCCAGCTCTCAGAGGTGTTGAGTTGGCAGTTTTCATCAGTCACCAAGAGAGGTCTGAACGCAGACCAGCTGAGCATGCTGGGAGAGAAGCTGCTGG
GTATGGTTGGACACGCACCCACAAG..........TGTTCGTTTTTGTGTTTGTTTCTAG
GCCCTAATGCTGGCCCTGATGGTCTTATTCCATGGACAAGGTTTTGTAAG
GTGGGTCCTCCCTGGGTTGTTTGCT..........CAATTGTGCATTTGTATACTTGCAG
GAAAATATTAATGATAAAAATTTCTCCTTCTGGCCTTGGATTGACACCATCCTAGAGCTCATTAAGAAGCACCTGCTGTGCCTCTGGAATGATGG
GTAAGCGTCCCTGAGCGCTCCGAAG..........CTCCATTCATCTCTTTAATACCCAG
GTGCATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTTAGGTTCAGTGAGAGCTCCCGGGAAGGGGCCATCACATTCACATGGGTGGAACGGTCCCAGAACGGAGGTG
GTGAGTGAAGGGTCTCCCTCATGCC..........GACCTCACTGGTTTCCTCCTTGTAG
AACCTGACTTCCATGCTGTGGAGCCCTACACGAAAAAAGAGCTTTCAGCTGTTACTTTCCCAGATATTATTCGCAACTACAAAGTCATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAGTATCTGTACCCCAATATTGACAAAGACCACGCCTTTGGGAAGTATTATTCCAGACCAAAGGAAG
GTGAGTGCCTGAGCGATCTGGGGTG..........GTGTACACGGTGTGCTTGCTCGTAG
CACCAGAACCGATGGAGCTTGACGACCCTAAGCGAACTGGATACATCAAGACTGAGTTGATTTCTGTGTCTGAAGTGTAAGTGAGCACAGAAGACTGGCTTGTTCAGGACCGCAGGCCAGCCCCGTCCCTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAACTGATGTTGCCACCACAGTTGGACATTCTGGAAAGTTTGTAACTAGTCCTGGTGTCAATGCTTACTGGCATTTTATTGCCATGAGATAAAAAAAAACAAACAAACAAAAAAAAAAAACAGCAGCAACAACGCACCAGCCAAACTCACAATAAACAAAAATGAAACAAAGTTGTATGTGAGGACTTCCCAAACTAACACTTTGAAAAAAAAAAAAGCATGAATAAAAAAGAAAAACCAAAA
CTTGATGAGTGGGAAAGCAGTTCTTTTCAAGCAAAGGCCAAAGTCGGAACTGGGGTCCAT
TTTCTCCACCTGCTTTGATTCTGTCGTTTCATTCCGTAGAAGGTAGAAAGTGCTGGAAAA
GTCATTGTCAGTTATTTGCTTGCGGCACTGTCTGGGGGTGAATGGATGTAGCCTTCATGT
AGAACCCTGTGGAGCAGCCTTATCTGCATAGACCTCAAGGTAGGGAGGAGGGATCCCCAG
ACATCTCTCGGTGCTTTTCTGTCCAGGGTGAGCCTCGAGAGTCCACCACCTCAGGATGCC
ACCGCACATGTTCCCACTGAGGCTCCCCAGGCAGCAGCGACGTCTGGCGAGGGCTGTCTC
TAAAGTCTAGTGTTACCCAAGGGGCCGGGCTGGGAACATTAACCGTCCGTGAGCTGTACT
CTGTGTGAGCTATGTTTTATAAAGTGTACGTTTTTCCTGAAATAAGACTACGAACTGATC
GCTCAGTCTCAGATAGAGAAAGTGTCTCGGCTTGCACTGCAGCCTACAGAACTCAGGTGT
TGACCCTGTCCTTTCCCCTCTCTGTTCCAGCCACCCTTCTAGACTTCAGACCACAGACAA
CCTGCTTCCCATGTCTCCAGAGGAGTTTGATGAGATGTCCCGGATAGTGGGTCCCGAATT
TGACAGTATGGTGAGTACTGTGGCAGGGGTATTTCCACCTTGGGGAAGCCTGAGGCAGGC
TGGTACTGCATCGGGCTGCTGTGAGGAGCTCAGAGAAGGCCTTTATTTATATTTTGTTTT
ATTTTACTTTTTAAAAGAAAAGCTTGTGTGTAAGCTAGCTGTTTCATCAGCAGGATTTTA
TCCCTAGCATTTCACATTCCTGTCCGCTGTTAGGCAGAAAGCTCACACACTAAGGGGTCG
AGGTTGTTTTCAGAGGTAGACATTTTCCCGTGACTGCTGTGTCTGTCTGGGCCCGAGTGA
AGGATTGATCTTAGGGAAGGATGGCTGCCTGTCGGTCACA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GCTCGAGGACCAAGTGTCCGGGACTAAATGGGCAACGTCTATGGCTTGGC CCTCATCCGTTCCAGACTAAGACGGGGTATGAGGAGGAACCTGTGTTTTGAGTACAGTTG GTTTACAGACTCAGTAGATATCCAAGGACAGGTTAACTGTGACACTTGGAAGAAAGCAGT GGGTGTGTATACATCTAGGAGTGCTCCAGGACATGGAAGTTACAGGGACAGTCATCAAAG GCACAGCGGGAGAAGGGTAGATAAGAGACTCACATTCTGGTTTAGTAGTTTAATAATGGA GATGGGGGACAGAGGGATGTCCTGCGAGAAAGGAAGAAGCAAAGAGGACCTGTCCTCATG ATGGCTAAGCAGGACAAAAGTTTCGGTAATGGAGGTGTCAATTGTGTAAAGCTTTATTTT TCTTAAACATATTAGTTAGAATTATTCATTTTATTTCATGACATTTTTGTTTTGCTTGCG TATATGTGTACTTCTTGCAGGCTTGGTTGACGTCAGTGGAGGTCCGAAGAGGGCACTAGA CTCCTGGAACTGGAGTTGGGAACCATTAAGCAGGCACTGCAAATCCAAGCCCTGTCCTCT GCAAGAGCAAGTTCTCTGTAGCTGCTGAGTTAAAGCCAAGTATTGAATGTTTTTAAATTG GTAAATTAAGCTCCCTGGCTTTAGTAACGTGAAGGTTAATCTTTAGTCCCCAATTCTGAA TCCCGCACTGATGCGCCTACTTAATGCAGGATCTCCAAGACTGAGCTTGCGCAAGCCTAT AGTTTCCAACCTTGTAAACACAACCTCCTGTCTGCGGTTTGCACCGCACAGCGGCGCCCC AAGTTTCGCACGCCGGGTAGGGAGCGCGCGGACCAGGAAGGCCAAGCAGCCGAGGGGGGG GGGACGGTGCGCTGATGGAACAGCCGGCCAATCCCTGCCGCTGATTGGCCGAGGCGGAAG GAGGCGGGACGCCCTCTAGCCTTTTTTCCTGCCCGGTACTTTCGGTTTTC
1	EXON 1	52,119,490	52,119,604	-	-	115	AGCGCCGAGTCTGTCAAAGCTCCCTGGAGACCTCCGGGACCGCGCCCCTCAGACCCACTT GGGACACTGCTGAGCGGCGCAGAGAGATTTGCCCAGACTCGAGCTCCTGCGTGCA
	INTRON 1 - 2	52,119,605	52,119,911			307	GTGAGTGAGTGAGAGCCAGGTGCGG..........CTGTAACATTTTCTTCTTTTTGCAG
2	EXON 2	52,119,912	52,120,110	-	-	199	TCGTTTCAGCTCTGCTCCATACCCTGAGCCGGCCCCACGCCGCCGCGCATGCAACTGGCA TATAACTTGCTGTGTGTGGTGATTGCTTGTGTTGAATCCCGAACCTGCCCCCGGAGACAG CCCAGTAAGTCTACGTGGGAACGGAAGCATTTGGAATCTCAGTATGTATCAGCCCTTACC GGTTTTCTGAAACTTAAAG
	INTRON 2 - 3	52,120,111	52,122,590			2,480	GTGGTATTTAGGTTCCGCAGAACCA..........GTTCACACGCGTGTTCTTTCTGCAG
3	EXON 3	52,122,591	52,122,721	-	2	131	AGGATGTCACAGTGGTTCGAGCTTCAGCAGCTGGACTCCAAGTTCCTGGAGCAGGTCCAC CAGCTGTACGATGACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCCAGTGGCTGGAA AAGCAAGACTG
	INTRON 3 - 4	52,122,722	52,123,113			392	GTAAGGAAAACTCACTGGCTAGGGA..........CAAAGCTAAATTCCCGCTGTTGTAG
4	EXON 4	52,123,114	52,123,258	2	0	145	GGAGCACGCTGCCTATGATGTCTCGTTTGCGACCATCCGCTTCCACGACCTCCTCTCGCA GCTGGACGACCAGTACAGCCGCTTTTCTCTGGAGAATAATTTCTTGTTGCAGCACAACAT ACGGAAAAGCAAGCGTAATCTCCAG
	INTRON 4 - 5	52,123,259	52,126,519			3,261	GTACGGACTGGCTTTGTGCCTCACT..........CACGGTATCGTCTCCAACAATCTAG
5	EXON 5	52,126,520	52,126,618	0	0	99	GATAACTTCCAAGAAGATCCCGTACAGATGTCCATGATCATCTACAACTGTCTGAAGGAA GAAAGGAAGATTTTGGAAAATGCCCAAAGATTTAATCAG
	INTRON 5 - 6	52,126,619	52,132,543			5,925	GTACTTGGTTCTCAGTGGACGCTAA..........GCTAACAGTGTGTTTCCCTTTAAAG
6	EXON 6	52,132,544	52,132,633	0	0	90	GCCCAGGAGGGAAATATTCAGAACACTGTGATGTTAGATAAACAGAAGGAGCTGGACAGT AAAGTCAGAAATGTGAAGGATCAAGTCATG
	INTRON 6 - 7	52,132,634	52,135,602			2,969	GTGAGTACAGACAGAATGCCTGCGT..........AACTCACTTATATCTTTATCTGCAG
7	EXON 7	52,135,603	52,135,681	0	1	79	TGCATAGAGCAGGAAATCAAGACCCTAGAAGAATTACAAGATGAATATGACTTTAAATGC AAAACCTCTCAGAACAGAG
	INTRON 7 - 8	52,135,682	52,136,878			1,197	GTAAGAGTCCCAACAGCACCCGTTG..........TTACTCCCTGTTCCTTCATTCACAG
8	EXON 8	52,136,879	52,136,970	1	0	92	AAGGTGAAGCCAATGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCTGCTGCTCCACA AGATGTTTTTAATGCTTGACAATAAGAGAAAG
	INTRON 8 - 9	52,136,971	52,137,278			308	GTAGCGACTGCTTCCCAGTCATGAG..........CACCTTGTTCTTCCTCGCCCTTTAG
9	EXON 9	52,137,279	52,137,430	0	2	152	GAGATAATTCACAAAATCAGAGAGTTGCTGAATTCCATCGAGCTCACTCAGAACACTCTG ATTAATGACGAGCTCGTGGAGTGGAAGCGAAGGCAGCAGAGTGCCTGCATCGGGGGACCG CCCAACGCCTGCCTGGATCAGCTGCAAAGCTG
	INTRON 9 - 10	52,137,431	52,139,193			1,763	GTAAGGTTTTCCCCGGGGTGGAAGA..........GACCCCATGTCCTGTACCCTCCCAG
10	EXON 10	52,139,194	52,139,352	2	2	159	GTTCACCATTGTTGCAGAGACCCTGCAGCAGATCCGTCAGCAGCTTAAAAAGCTGGAGGA GTTGGAACAGAAATTCACCTATGAGCCCGACCCTATTACAAAAAACAAGCAGGTGTTGTC AGATCGAACCTTCCTCCTCTTCCAGCAGCTCATTCAGAG
	INTRON 10 - 11	52,139,353	52,140,576			1,224	GTAAGGCCAGGCAGACCGACTATCC..........ATGTGTGTTTCCGGGTCACTGACAG
11	EXON 11	52,140,577	52,140,669	2	2	93	CTCCTTCGTGGTAGAACGACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCTGGTCTT GAAGACTGGGGTACAGTTCACTGTCAAGCTGAG
	INTRON 11 - 12	52,140,670	52,142,900			2,231	GTAACGAACATAGAGCTCCATATGC..........TAACAACTGTTATTTTTCTTTCAAG
12	EXON 12	52,142,901	52,142,960	2	2	60	ACTGTTGGTGAAATTGCAAGAGCTGAACTATAACTTGAAAGTGAAAGTCTCATTTGACAA
	INTRON 12 - 13	52,142,961	52,144,085			1,125	GTAAGATTTCTGTAATCTTATCTAA..........TTAAAATTTACATATTTTTTTACAG
13	EXON 13	52,144,086	52,144,115	2	2	30	AGATGTGAACGAGAAAAACACAGTAAAAGG
	INTRON 13 - 14	52,144,116	52,144,203			88	GTAGGTATAGCATCTGCACCCTACT..........AGGATTTGTGTCTTGCGTTGTATAG
14	EXON 14	52,144,204	52,144,297	2	0	94	ATTTCGGAAGTTCAACATCTTGGGTACGCACACAAAAGTGATGAACATGGAAGAATCCAC CAACGGAAGTCTGGCAGCTGAGTTCCGACACCTG
	INTRON 14 - 15	52,144,298	52,145,149			852	GTAGGCAGAGCAGTTTGATGTCTTG..........TGCCATTCGGTTTCTTCTTTTACAG
15	EXON 15	52,145,150	52,145,191	0	0	42	CAACTGAAGGAACAGAAAAACGCTGGGAACAGAACTAATGAG
	INTRON 15 - 16	52,145,192	52,147,293			2,102	GTGAGCATCTCTGGGTGGCTAGCGG..........AGCTCTTTTCTTTTTGTTTTGGAAG
16	EXON 16	52,147,294	52,147,377	0	0	84	GGGCCTCTCATTGTCACCGAAGAACTTCACTCTCTTAGCTTTGAAACCCAGTTGTGCCAG CCAGGTTTGGTGATTGACCTGGAG
	INTRON 16 - 17	52,147,378	52,147,900			523	GTAAGAGTTACAGTTTCCTGAGGGA..........TTCCAAGGTCTTTGTTCCCTTTCAG
17	EXON 17	52,147,901	52,147,999	0	0	99	ACCACCTCTCTTCCTGTCGTGGTGATCTCCAACGTCAGCCAGCTCCCCAGTGGCTGGGCG TCTATCCTGTGGTACAACATGCTGGTGACAGAGCCCAGG
	INTRON 17 - 18	52,148,000	52,148,902			903	GTATGGAAAACACATGTGCTTTAGT..........CAGCCTCTGGGTGTTTTCTCTGCAG
18	EXON 18	52,148,903	52,149,038	0	1	136	AATCTCTCCTTCTTCCTGAACCCCCCGTGCGCGTGGTGGTCCCAGCTCTCAGAGGTGTTG AGTTGGCAGTTTTCATCAGTCACCAAGAGAGGTCTGAACGCAGACCAGCTGAGCATGCTG GGAGAGAAGCTGCTGG
	INTRON 18 - 19	52,149,039	52,150,618			1,580	GTATGGTTGGACACGCACCCACAAG..........TGTTCGTTTTTGTGTTTGTTTCTAG
19	EXON 19	52,150,619	52,150,668	1	0	50	GCCCTAATGCTGGCCCTGATGGTCTTATTCCATGGACAAGGTTTTGTAAG
	INTRON 19 - 20	52,150,669	52,151,237			569	GTGGGTCCTCCCTGGGTTGTTTGCT..........CAATTGTGCATTTGTATACTTGCAG
20	EXON 20	52,151,238	52,151,332	0	2	95	GAAAATATTAATGATAAAAATTTCTCCTTCTGGCCTTGGATTGACACCATCCTAGAGCTC ATTAAGAAGCACCTGCTGTGCCTCTGGAATGATGG
	INTRON 20 - 21	52,151,333	52,152,232			900	GTAAGCGTCCCTGAGCGCTCCGAAG..........CTCCATTCATCTCTTTAATACCCAG
21	EXON 21	52,152,233	52,152,378	2	1	146	GTGCATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCC AGGGACGTTCCTGCTTAGGTTCAGTGAGAGCTCCCGGGAAGGGGCCATCACATTCACATG GGTGGAACGGTCCCAGAACGGAGGTG
	INTRON 21 - 22	52,152,379	52,153,843			1,465	GTGAGTGAAGGGTCTCCCTCATGCC..........GACCTCACTGGTTTCCTCCTTGTAG
22	EXON 22	52,153,844	52,154,029	1	1	186	AACCTGACTTCCATGCTGTGGAGCCCTACACGAAAAAAGAGCTTTCAGCTGTTACTTTCC CAGATATTATTCGCAACTACAAAGTCATGGCTGCCGAGAACATACCAGAGAATCCCCTGA AGTATCTGTACCCCAATATTGACAAAGACCACGCCTTTGGGAAGTATTATTCCAGACCAA AGGAAG
	INTRON 22 - 23	52,154,030	52,154,985			956	GTGAGTGCCTGAGCGATCTGGGGTG..........GTGTACACGGTGTGCTTGCTCGTAG
23	EXON 23	52,154,986	52,155,412	1	-	427	CACCAGAACCGATGGAGCTTGACGACCCTAAGCGAACTGGATACATCAAGACTGAGTTGA TTTCTGTGTCTGAAGTGTAAGTGAGCACAGAAGACTGGCTTGTTCAGGACCGCAGGCCAG CCCCGTCCCTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCC AATGTAACTGATGTTGCCACCACAGTTGGACATTCTGGAAAGTTTGTAACTAGTCCTGGT GTCAATGCTTACTGGCATTTTATTGCCATGAGATAAAAAAAAACAAACAAACAAAAAAAA AAAACAGCAGCAACAACGCACCAGCCAAACTCACAATAAACAAAAATGAAACAAAGTTGT ATGTGAGGACTTCCCAAACTAACACTTTGAAAAAAAAAAAAGCATGAATAAAAAAGAAAA ACCAAAA
	3' upstream sequence						CTTGATGAGTGGGAAAGCAGTTCTTTTCAAGCAAAGGCCAAAGTCGGAACTGGGGTCCAT TTTCTCCACCTGCTTTGATTCTGTCGTTTCATTCCGTAGAAGGTAGAAAGTGCTGGAAAA GTCATTGTCAGTTATTTGCTTGCGGCACTGTCTGGGGGTGAATGGATGTAGCCTTCATGT AGAACCCTGTGGAGCAGCCTTATCTGCATAGACCTCAAGGTAGGGAGGAGGGATCCCCAG ACATCTCTCGGTGCTTTTCTGTCCAGGGTGAGCCTCGAGAGTCCACCACCTCAGGATGCC ACCGCACATGTTCCCACTGAGGCTCCCCAGGCAGCAGCGACGTCTGGCGAGGGCTGTCTC TAAAGTCTAGTGTTACCCAAGGGGCCGGGCTGGGAACATTAACCGTCCGTGAGCTGTACT CTGTGTGAGCTATGTTTTATAAAGTGTACGTTTTTCCTGAAATAAGACTACGAACTGATC GCTCAGTCTCAGATAGAGAAAGTGTCTCGGCTTGCACTGCAGCCTACAGAACTCAGGTGT TGACCCTGTCCTTTCCCCTCTCTGTTCCAGCCACCCTTCTAGACTTCAGACCACAGACAA CCTGCTTCCCATGTCTCCAGAGGAGTTTGATGAGATGTCCCGGATAGTGGGTCCCGAATT TGACAGTATGGTGAGTACTGTGGCAGGGGTATTTCCACCTTGGGGAAGCCTGAGGCAGGC TGGTACTGCATCGGGCTGCTGTGAGGAGCTCAGAGAAGGCCTTTATTTATATTTTGTTTT ATTTTACTTTTTAAAAGAAAAGCTTGTGTGTAAGCTAGCTGTTTCATCAGCAGGATTTTA TCCCTAGCATTTCACATTCCTGTCCGCTGTTAGGCAGAAAGCTCACACACTAAGGGGTCG AGGTTGTTTTCAGAGGTAGACATTTTCCCGTGACTGCTGTGTCTGTCTGGGCCCGAGTGA AGGATTGATCTTAGGGAAGGATGGCTGCCTGTCGGTCACA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Stat1 (ENSMUSG00000026104)
Transcript ID	ENSMUST00000191435

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 713 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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