MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Igsf3 (ENSMUSG00000042035)

Cross Reference

EMBL	AC131184
GO	GO:0003674, GO:0009986, GO:0032808
goslim_goa	GO:0003674, GO:0005575, GO:0005623, ...show all
MGI_trans_name	Igsf3-002
OTTP	OTTMUSP00000070201
OTTT	OTTMUST00000131172
RefSeq_peptide_predicted	XP_006502405.1, XP_006502406.1, XP_011238589.1
UCSC	uc008qrg.2
UniParc	UPI0003D71D66
Uniprot/SPTREMBL	A0A0A6YX40

Vega_transcript	Igsf3-002, OTTMUST00000131172
Vega_translation	188310, OTTMUSP00000070201

Definition

protein_id:ENSMUSP00000141823
translation:

MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIY
LPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYEC
HTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLS
VSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSD
QGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEF
RCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFV
LKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLTDNWVVKVPQQHQ
ILPQGHLESSISVEVASNASVVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNV
MWLDRDGTLQPGSAYWERSSYGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAV
DGEWQIVGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSV
TWRFQPVGTVEFHDLVTFTRDGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEA
GKYQCVAELWRRNYNNTWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLN
CSVKSQTSPNSHFAVLWYVHKPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHV
SGGLFSLTVQRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLS
QVQGSLSVLETRQIQLECVVLNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGE
QAAKNNLKGRLHAESPSSGVYRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAG
QTAVTVMRPDAALQVDTVVPNATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGK
RGSLGIDEQEEEEEEEDISQEEDSEDPTERTVLLSVGPDAVFGPEGSPWEGRLRFQRLSP
LLYRLTVLEASPQDTGNYSCHVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLIC
SNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTC
LEPPVLSIHPGAID

Chromosome

Length
Position(start - end)

81,586
101,378,450 - 101,460,037

Orient to Chromosome

plus

Link

Location : (3:101378450-101460037)
/

Detail Map

name	Igsf3 (ENSMUSG00000042035)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Igsf3 note : immunoglobulin superfamily, member 3 [Source:MGI Symbol;Acc:MGI:1926158]

name	RP23-347G20.4 (ENSMUSG00000104639)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : RP23-347G20.4

name	RP23-347G20.5 (ENSMUSG00000105611)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : RP23-347G20.5

name	RP23-347G20.6 (ENSMUSG00000106137)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : RP23-347G20.6

name	Igsf3 (ENSMUSG00000042035)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000043983

name	Igsf3 (ENSMUSG00000042035)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000195164

name	Igsf3 (ENSMUSG00000042035) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS17682.1 Uniprot/SWISSPROT:Q6ZQA6 RefSeq_peptide:NP_997088 RefSeq_mRNA:NM_207205.2 Vega_transcript:Igsf3-001 Vega_transcript:OTTMUST00000131171 UCSC:uc008qrg.2 Fantom:D430026G15 EMBL:AK052454 EMBL:AK129151 EMBL:BC052892 GO:GO:0003674 GO:GO:0009986 GO:GO:0009986 GO:GO:0016021 GO:GO:0032808 GO:GO:0032808 MGI_trans_name:Igsf3-001 Vega_translation:188309 Vega_translation:OTTMUSP00000070200 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0008150 goslim_goa:GO:0048856 protein_id:AAH52892.1 protein_id:BAC35000.1 protein_id:BAC97961.1 OTTP:OTTMUSP00000070200 OTTT:OTTMUST00000131171 UniParc:UPI00001C2D24
definition	note : transcript_id=ENSMUST00000043983 protein_id : ENSMUSP00000048900 translation : MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIYLPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYECHTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLSVSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSDQGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEFRCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFVLKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLKSSISVEVASNASVVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNVMWLDRDGTLQPGSAYWERSSYGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQIVGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQPVGTVEFHDLVTFTRDGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEAGKYQCVAELWRRNYNNTWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLNCSVKSQTSPNSHFAVLWYVHKPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHVSGGLFSLTVQRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLSQVQGSLSVLETRQIQLECVVLNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGEQAAKNNLKGRLHAESPSSGVYRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAGQTAVTVMRPDAALQVDTVVPNATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGKRGSLGIDEQEEEEEEEDISQEEDSEDPTERTVLLSVGPDAVFGPEGSPWEGRLRFQRLSPLLYRLTVLEASPQDTGNYSCHVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLICSNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTCLEPPVLSIHPGAID

name	Igsf3 (ENSMUSG00000042035) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006502405.1 RefSeq_peptide_predicted:XP_006502406.1 RefSeq_peptide_predicted:XP_011238589.1 Vega_transcript:Igsf3-002 Vega_transcript:OTTMUST00000131172 Uniprot/SPTREMBL:A0A0A6YX40 UCSC:uc008qrg.2 EMBL:AC131184 GO:GO:0003674 GO:GO:0009986 GO:GO:0032808 MGI_trans_name:Igsf3-002 Vega_translation:188310 Vega_translation:OTTMUSP00000070201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0008150 goslim_goa:GO:0048856 OTTP:OTTMUSP00000070201 OTTT:OTTMUST00000131172 UniParc:UPI0003D71D66
definition	note : transcript_id=ENSMUST00000195164 protein_id : ENSMUSP00000141823 translation : MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIYLPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYECHTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLSVSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSDQGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEFRCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFVLKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLTDNWVVKVPQQHQILPQGHLESSISVEVASNASVVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNVMWLDRDGTLQPGSAYWERSSYGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQIVGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQPVGTVEFHDLVTFTRDGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEAGKYQCVAELWRRNYNNTWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLNCSVKSQTSPNSHFAVLWYVHKPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHVSGGLFSLTVQRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLSQVQGSLSVLETRQIQLECVVLNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGEQAAKNNLKGRLHAESPSSGVYRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAGQTAVTVMRPDAALQVDTVVPNATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGKRGSLGIDEQEEEEEEEDISQEEDSEDPTERTVLLSVGPDAVFGPEGSPWEGRLRFQRLSPLLYRLTVLEASPQDTGNYSCHVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLICSNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTCLEPPVLSIHPGAID

name
type	STS
link
xref	UniSTS_NUM:129749 UniSTS:D3Mit312
definition	note : map_weight=1 standard_name : D3Mit312

name
type	misc_feature
link
xref
definition	note : contig AC131184.4 1..190892(-1)

name	Igsf3 (ENSMUSG00000042035)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000135070 Vega_transcript:OTTMUST00000135070 MGI_trans_name:Igsf3-003 OTTT:OTTMUST00000135070
definition	note : retained_intron note : transcript_id=ENSMUST00000198995

name	RP23-347G20.4 (ENSMUSG00000104639)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000135071 Vega_transcript:OTTMUST00000135071 Clone_based_vega_transcript:RP23-347G20.4-001 OTTT:OTTMUST00000135071 RNACentral:URS0000811ABF
definition	note : sense_intronic note : transcript_id=ENSMUST00000197514

name	RP23-347G20.5 (ENSMUSG00000105611)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000135072 Vega_transcript:OTTMUST00000135072 Clone_based_vega_transcript:RP23-347G20.5-001 OTTT:OTTMUST00000135072 RNACentral:URS0000811ABD
definition	note : sense_intronic note : transcript_id=ENSMUST00000198414

name	RP23-347G20.6 (ENSMUSG00000106137)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000135073 Vega_transcript:OTTMUST00000135073 Clone_based_vega_transcript:RP23-347G20.6-002 OTTT:OTTMUST00000135073 RNACentral:URS0000811C33
definition	note : antisense note : transcript_id=ENSMUST00000199431

name	RP23-347G20.6 (ENSMUSG00000106137)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000135074 Vega_transcript:OTTMUST00000135074 Clone_based_vega_transcript:RP23-347G20.6-001 OTTT:OTTMUST00000135074 RNACentral:URS0000811C7E
definition	note : antisense note : transcript_id=ENSMUST00000196233

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Igsf3 (ENSMUSG00000042035)
Transcript ID	ENSMUST00000195164

Reports
substitution
cSNPs	16
Insertion	51
Deletion	63
SNPs	-1kb 101373524(c.-4926G>A), 101373563(c.-4887A>G), 101373575(c.-4875T>G), 101373600(c.-4850A>G), 101373603(c.-4847A>C), 101373815(c.-4635T>G), 101374394(c.-4056T>C), 101374399(c.-4051C>T), 101374642(c.-3808C>T), 101374748(c.-3702T>C), 101374827(c.-3623A>T), 101375986(c.-2464G>A), 101376211(c.-2239A>G), 101376497(c.-1953A>G), 101376529(c.-1921G>A), 101377522(c.-928T>C), 101377991(c.-459C>A), 5'UTR CDS 101425455(c.48G>T), 101425515(c.108C>T), 101425602(c.195T>A), 101425689(c.282C>T), 101425752(c.345C>T), 101425791(c.384C>A), 101427295(c.687T>C), 101431586(c.1215G>C), 101439388(c.1698A>G), 101439721(c.2031A>G), 101450918(c.2124G>C), 101455208(c.2604G>C), 101457916(c.3202C>T), 101458059(c.3345A>G), 101459968(c.3576T>G), 101460031(c.3639T>A), 3'UTR 101460051(c.14T>C), INTRON 101378860(c.43+368T>G), 101378994(c.43+502T>C), 101379065(c.43+573C>T), 101379794(c.43+1302G>A), 101379839(c.43+1347G>A), 101380365(c.43+1873T>G), 101380372(c.43+1880A>G), 101380418(c.43+1926A>C), 101380453(c.43+1961T>C), 101380536(c.43+2044T>G), 101380606(c.43+2114G>A), 101380706(c.43+2214T>C), 101380718(c.43+2226G>A), 101381742(c.43+3250A>G), 101381974(c.43+3482A>T), 101382678(c.43+4186C>G), 101382964(c.43+4472A>G), 101383410(c.43+4918C>T), 101383430(c.43+4938T>A), 101383892(c.43+5400A>G), 101384023(c.43+5531G>A), 101384103(c.43+5611C>T), 101384263(c.43+5771C>A), 101384545(c.43+6053T>C), 101384571(c.43+6079G>C), 101384623(c.43+6131G>A), 101384722(c.43+6230A>G), 101384788(c.43+6296A>G), 101384936(c.43+6444C>T), 101384979(c.43+6487G>A), 101384988(c.43+6496C>T), 101385049(c.43+6557A>G), 101385198(c.43+6706T>G), 101385350(c.43+6858A>C), 101385451(c.43+6959G>T), 101385609(c.43+7117G>C), 101385807(c.43+7315A>C), 101385989(c.43+7497G>A), 101385999(c.43+7507G>T), 101386396(c.43+7904G>A), 101386833(c.43+8341A>G), 101386919(c.43+8427C>G), 101387148(c.43+8656T>C), 101387849(c.43+9357C>A), 101388469(c.43+9977T>C), 101388578(c.43+10086T>C), 101388606(c.43+10114C>G), 101388911(c.43+10419C>T), 101389004(c.43+10512T>C), 101389054(c.43+10562A>G), 101389149(c.43+10657T>C), 101389351(c.43+10859A>G), 101389518(c.43+11026G>A), 101389519(c.43+11027T>C), 101389528(c.43+11036C>G), 101389597(c.43+11105G>C), 101389599(c.43+11107C>A), 101389616(c.43+11124G>A), 101389792(c.43+11300A>G), 101389841(c.43+11349A>T), 101389877(c.43+11385G>C), 101389933(c.43+11441T>C), 101390231(c.43+11739A>T), 101390366(c.43+11874C>A), 101390377(c.43+11885G>A), 101390391(c.43+11899C>G), 101390515(c.43+12023C>T), 101390612(c.43+12120G>A), 101391302(c.43+12810T>C), 101391517(c.43+13025G>A), 101391649(c.43+13157T>C), 101392276(c.43+13784C>T), 101392508(c.43+14016G>T), 101392509(c.43+14017A>T), 101392614(c.43+14122T>C), 101392692(c.43+14200T>C), 101392731(c.43+14239G>A), 101392888(c.43+14396T>C), 101392928(c.43+14436G>A), 101393170(c.43+14678C>T), 101393229(c.43+14737G>A), 101393374(c.43+14882G>C), 101393544(c.43+15052T>C), 101393557(c.43+15065A>G), 101393595(c.43+15103G>A), 101393877(c.43+15385A>G), 101394903(c.43+16411A>G), 101395067(c.43+16575A>G), 101395439(c.43+16947C>G), 101395794(c.43+17302C>T), 101395795(c.43+17303A>G), 101395803(c.43+17311T>C), 101395818(c.43+17326A>G), 101395883(c.43+17391T>C), 101396014(c.43+17522G>A), 101396200(c.43+17708G>T), 101396260(c.43+17768C>G), 101396312(c.43+17820A>T), 101396348(c.43+17856G>T), 101396360(c.43+17868T>G), 101396419(c.43+17927G>A), 101396444(c.43+17952A>T), 101396448(c.43+17956T>C), 101396556(c.43+18064A>G), 101396933(c.43+18441T>G), 101397102(c.43+18610G>A), 101397216(c.43+18724T>C), 101397531(c.43+19039A>T), 101397687(c.43+19195A>G), 101397699(c.43+19207T>C), 101397730(c.43+19238G>T), 101398395(c.43+19903T>C), 101399143(c.43+20651G>A), 101399278(c.43+20786G>T), 101399679(c.43+21187G>T), 101399741(c.43+21249T>G), 101399799(c.43+21307T>C), 101399802(c.43+21310C>T), 101400383(c.43+21891C>T), 101400538(c.43+22046A>G), 101400677(c.43+22185C>T), 101400716(c.43+22224T>G), 101400770(c.43+22278G>A), 101400938(c.43+22446A>G), 101401082(c.43+22590A>G), 101401260(c.43+22768C>T), 101401409(c.43+22917A>C), 101402471(c.44-22980T>C), 101402606(c.44-22845C>T), 101402818(c.44-22633C>T), 101402834(c.44-22617G>A), 101403002(c.44-22449C>G), 101403062(c.44-22389T>C), 101403253(c.44-22198G>T), 101403290(c.44-22161C>T), 101403377(c.44-22074G>A), 101403378(c.44-22073C>G), 101403386(c.44-22065A>T), 101403418(c.44-22033C>T), 101403475(c.44-21976C>T), 101403538(c.44-21913T>C), 101403585(c.44-21866T>C), 101403704(c.44-21747C>T), 101403740(c.44-21711T>C), 101403863(c.44-21588G>T), 101404022(c.44-21429A>G), 101404186(c.44-21265C>G), 101404204(c.44-21247T>C), 101404308(c.44-21143G>A), 101404612(c.44-20839T>A), 101404783(c.44-20668A>G), 101404840(c.44-20611C>T), 101404926(c.44-20525G>T), 101404928(c.44-20523C>T), 101404948(c.44-20503C>T), 101405117(c.44-20334G>A), 101405140(c.44-20311G>A), 101405229(c.44-20222T>C), 101405348(c.44-20103G>C), 101405376(c.44-20075C>A), 101405728(c.44-19723A>G), 101405855(c.44-19596C>T), 101405860(c.44-19591G>A), 101405941(c.44-19510C>T), 101406033(c.44-19418C>T), 101406036(c.44-19415A>G), 101406043(c.44-19408T>C), 101406059(c.44-19392C>T), 101406106(c.44-19345T>A), 101406204(c.44-19247C>T), 101406205(c.44-19246A>G), 101406243(c.44-19208A>G), 101406340(c.44-19111T>C), 101406496(c.44-18955G>A), 101406556(c.44-18895A>G), 101406658(c.44-18793A>G), 101406681(c.44-18770G>T), 101406761(c.44-18690C>T), 101407022(c.44-18429A>G), 101407101(c.44-18350C>T), 101407168(c.44-18283T>C), 101407320(c.44-18131C>T), 101407645(c.44-17806C>T), 101407874(c.44-17577G>A), 101407924(c.44-17527T>C), 101407928(c.44-17523T>C), 101408036(c.44-17415A>G), 101408047(c.44-17404T>A), 101408084(c.44-17367T>A), 101408092(c.44-17359A>G), 101408167(c.44-17284T>A), 101408168(c.44-17283C>T), 101408460(c.44-16991G>A), 101408523(c.44-16928A>G), 101408558(c.44-16893C>A), 101408659(c.44-16792G>T), 101408760(c.44-16691C>T), 101409004(c.44-16447C>T), 101409084(c.44-16367G>A), 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101448266(c.2090-2618T>C), 101448289(c.2090-2595C>T), 101448296(c.2090-2588T>C), 101448308(c.2090-2576A>G), 101448373(c.2090-2511G>A), 101448719(c.2090-2165T>C), 101448756(c.2090-2128G>T), 101448855(c.2090-2029G>A), 101449011(c.2090-1873G>A), 101449043(c.2090-1841A>G), 101449086(c.2090-1798A>G), 101449106(c.2090-1778A>C), 101449478(c.2090-1406C>T), 101449501(c.2090-1383A>G), 101449579(c.2090-1305A>G), 101449984(c.2090-900A>C), 101450266(c.2090-618C>G), 101450356(c.2090-528T>A), 101450371(c.2090-513G>C), 101450542(c.2090-342G>A), 101450613(c.2090-271T>G), 101450757(c.2090-127A>G), 101450773(c.2090-111T>G), 101451297(c.2500+3A>G), 101451319(c.2500+25A>G), 101451363(c.2500+69C>T), 101451486(c.2500+192C>T), 101451525(c.2500+231T>C), 101451550(c.2500+256G>C), 101451700(c.2500+406A>G), 101451822(c.2500+528C>T), 101451826(c.2500+532G>A), 101451898(c.2500+604C>G), 101451902(c.2500+608T>C), 101451914(c.2500+620A>G), 101452148(c.2500+854C>T), 101452178(c.2500+884C>T), 101452197(c.2500+903G>A), 101452465(c.2500+1171A>G), 101452480(c.2500+1186T>C), 101452488(c.2500+1194A>G), 101452491(c.2500+1197T>C), 101452568(c.2500+1274T>C), 101452592(c.2500+1298A>G), 101452748(c.2500+1454A>G), 101452784(c.2500+1490A>G), 101452893(c.2500+1599C>T), 101452912(c.2500+1618T>C), 101452939(c.2500+1645T>C), 101453016(c.2500+1722A>G), 101453090(c.2500+1796T>G), 101453248(c.2501-1857G>T), 101453288(c.2501-1817A>G), 101453290(c.2501-1815T>C), 101453291(c.2501-1814G>A), 101453545(c.2501-1560C>G), 101453553(c.2501-1552C>G), 101453561(c.2501-1544C>G), 101453726(c.2501-1379A>G), 101453736(c.2501-1369T>A), 101453754(c.2501-1351G>A), 101453917(c.2501-1188A>G), 101454004(c.2501-1101T>C), 101454019(c.2501-1086C>A), 101454033(c.2501-1072T>C), 101454112(c.2501-993T>G), 101454223(c.2501-882C>T), 101454245(c.2501-860A>G), 101454358(c.2501-747T>C), 101454367(c.2501-738C>T), 101454390(c.2501-715G>A), 101454572(c.2501-533A>G), 101454745(c.2501-360T>C), 101454772(c.2501-333A>G), 101454778(c.2501-327G>T), 101454807(c.2501-298A>G), 101454845(c.2501-260T>G), 101454936(c.2501-169T>G), 101454947(c.2501-158A>G), 101455009(c.2501-96G>T), 101455652(c.2908+140G>A), 101455659(c.2908+147A>C), 101455681(c.2908+169A>G), 101455693(c.2908+181G>A), 101455850(c.2908+338G>A), 101456477(c.2908+965C>A), 101456619(c.2909-1004T>A), 101456631(c.2909-992A>G), 101456844(c.2909-779T>C), 101457177(c.2909-446T>G), 101457479(c.2909-144A>C), 101457581(c.2909-42G>T), 101457586(c.2909-37G>A), 101457611(c.2909-12G>A), 101458455(c.3394+347A>G), 101458466(c.3394+358A>G), 101458483(c.3394+375T>C), 101458636(c.3394+528T>C), 101458679(c.3394+571T>C), 101458876(c.3394+768T>G), 101459075(c.3395-712C>G), 101459349(c.3395-438A>G), 101459504(c.3395-283G>A), 101459723(c.3395-64C>T), 101459741(c.3395-46G>A), +1kb 101460277(c.240A>G), 101460345(c.308A>G), 101460355(c.318T>C), 101460582(c.545C>T), 101460583(c.546T>C), 101460679(c.642T>C), 101460946(c.909C>G), 101461278(c.1241G>A), 101461525(c.1488T>C), 101461615(c.1578G>A), 101461619(c.1582C>T), 101461703(c.1666C>A), 101461758(c.1721T>C), 101461759(c.1722G>A), 101461838(c.1801A>G), 101461858(c.1821T>C), 101462626(c.2589G>T), 101462627(c.2590T>G), 101462655(c.2618G>T), 101462696(c.2659G>A), 101462797(c.2760C>T), 101462922(c.2885A>G), 101463232(c.3195A>G), 101463347(c.3310A>C), 101463469(c.3432G>A), 101463513(c.3476T>C), 101463525(c.3488C>T), 101463741(c.3704C>T), 101463747(c.3710G>A), 101464110(c.4073G>T), 101464199(c.4162G>A), 101464408(c.4371G>A), 101464491(c.4454C>T), 101464629(c.4592G>A), 101464926(c.4889C>T), 101464967(c.4930A>G), 101464988(c.4951A>G),
Insertions	-1kb 5'UTR CDS 101457807 (c.3108_3110dupGGA), 3'UTR INTRON 101379548 (c.43+1064dupA), 101380679 (c.43+2188_43+2189insGT), 101381119 (c.43+2627_43+2628insGAA), 101381127 (c.43+2638_43+2639insCAGA), 101384038 (c.43+5549dupG), 101386227 (c.43+7739_43+7742dupCTTT), 101387789 (c.43+9299_43+9300insCTTTT), 101387897 (c.43+9406dupA), 101388963 (c.43+10474_43+10479dupCCCTCC), 101389330 (c.43+10838_43+10839insT), 101389389 (c.43+10898_43+10899insCGG), 101390638 (c.43+12150dupT), 101392509 (c.43+14018dupT), 101395624 (c.43+17133_43+17134insCTCT), 101396089 (c.43+17599_43+17600dupAG), 101397008 (c.43+18520_43+18524dupCAAGC), 101400888 (c.43+22396_43+22397insAT), 101400974 (c.43+22485dupT), 101402991 (c.44-22458_44-22456dupATT), 101403381 (c.44-22070_44-22069insGTC), 101404211 (c.44-21244_44-21240dupCCCCC), 101404266 (c.44-21184_44-21183insTT), 101404270 (c.44-21180dupT), 101404888 (c.44-20561_44-20560insGTTGAG), 101406864 (c.44-18584dupG), 101407576 (c.44-17871dupG), 101407806 (c.44-17643dupG), 101408018 (c.44-17432_44-17431insAT), 101411878 (c.44-13571dupG), 101412199 (c.44-13250_44-13249insTTATC), 101412610 (c.44-12833_44-12831dupAAA), 101412974 (c.44-12465dupG), 101413823 (c.44-11625dupT), 101420087 (c.44-5343_44-5340dupATGT), 101423196 (c.44-2254dupA), 101425878 (c.421+50_421+51insTTAC), 101428914 (c.832+1475dupT), 101438420 (c.1685-952dupG), 101441829 (c.2089+2052_2089+2053dupGG), 101442352 (c.2089+2576_2089+2577dupCT), 101443169 (c.2089+3394_2089+3397dupAGAG), 101447363 (c.2090-3518dupG), 101448076 (c.2090-2805_2090-2804insGAAT), 101454878 (c.2501-227_2501-226insT), 101455085 (c.2501-14dupT), 101456416 (c.2908+906dupC), +1kb 101460598 (c.561_562insTTC), 101461196 (c.1159_1160insGG), 101461219 (c.1182_1183insGTGGT), 101462748 (c.2711_2712insTTTT),
Deletions	-1kb 101374353 (c.-4096_-4093delTCTC), 101374913 (c.-3536_-3529delACACACAC), 101375419 (c.-3030_-3028delGGG), 101376116 (c.-2333_-2332delCC), 5'UTR CDS 3'UTR INTRON 101378902 (c.43+415delG), 101380107 (c.43+1627_43+1630delCTTT), 101380443 (c.43+1954_43+1955delGA), 101382600 (c.43+4109_43+4110delAA), 101387814 (c.43+9323delA), 101392888 (c.43+14397delG), 101401177 (c.43+22689_43+22692delCCCT), 101402372 (c.44-23078_44-23077delGT), 101402784 (c.44-22664_44-22656delCCAACCTGA), 101403359 (c.44-22091_44-22090delCC), 101404495 (c.44-20955_44-20947delTGGTTCTAA), 101404613 (c.44-20837_44-20833delGGGTG), 101405889 (c.44-19550_44-19547delTTTT), 101407191 (c.44-18256_44-18253delGTTT), 101408204 (c.44-17242delG), 101408363 (c.44-17087_44-17081delCAAAAAC), 101408783 (c.44-16662delT), 101408914 (c.44-16536_44-16530delTTTTAAA), 101409243 (c.44-16204delA), 101409403 (c.44-16045_44-16044delGC), 101410325 (c.44-15124delC), 101415800 (c.44-9649delA), 101417966 (c.44-7484_44-7480delCAGTG), 101419756 (c.44-5689_44-5688delAG), 101421627 (c.44-3823delC), 101423471 (c.44-1979_44-1976delAAAA), 101424463 (c.44-986delG), 101427577 (c.832+138_832+140delGGG), 101427755 (c.832+318delT), 101428068 (c.832+629delA), 101429655 (c.833-1547_833-1546delAT), 101429778 (c.833-1425_833-1418delTGTCGGGC), 101430793 (c.833-400delT), 101433044 (c.1282+73_1282+81delTAAGAACCC), 101433391 (c.1282+418_1282+419delTT), 101439031 (c.1685-337delT), 101440790 (c.2089+1013_2089+1014delCC), 101440991 (c.2089+1213delG), 101441454 (c.2089+1678_2089+1682delGCTAG), 101447006 (c.2090-3875delA), 101447592 (c.2090-3283delT), 101447947 (c.2090-2936delA), 101449589 (c.2090-1289delG), 101450301 (c.2090-582delC), 101450436 (c.2090-444_2090-441delGGAC), 101451767 (c.2500+478_2500+481delTGAT), 101452623 (c.2500+1330_2500+1331delTC), 101453571 (c.2501-1533_2501-1527delACACACC), 101454192 (c.2501-907_2501-905delAAG), 101455520 (c.2908+9_2908+14delCTAGCC), 101455627 (c.2908+118delT), 101455827 (c.2908+318_2908+323delTGCCTC), 101458446 (c.3394+339delC), +1kb 101460857 (c.821delA), 101461093 (c.1057delA), 101461461 (c.1425_1430delGCGCGC), 101461867 (c.1831_1832delAG), 101462329 (c.2293_2297delAAAAC), 101464479 (c.*4443delC),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	15
non-synonymous num	1
synonymous substitutions	101425455 (p.Val16Val), 101425515 (p.Ser36Ser), 101425602 (p.Pro65Pro), 101425689 (p.Tyr94Tyr), 101425752 (p.Ala115Ala), 101425791 (p.Arg128Arg), 101427295 (p.Phe229Phe), 101431586 (p.Leu405Leu), 101439388 (p.Ala566Ala), 101439721 (p.Thr677Thr), 101450918 (p.Thr708Thr), 101455208 (p.Ser868Ser), 101458059 (p.Arg1115Arg), 101459968 (p.Pro1192Pro), 101460031 (p.Ile1213Ile),
non-synonymous substitutions	101457916 (p.Pro1068Ser),
B6 transcript (ENSMUST00000195164)	MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIY LPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYEC HTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLS VSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSD QGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEF RCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFV LKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLTDNWVVKVPQQHQ ILPQGHLESSISVEVASNASVVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNV MWLDRDGTLQPGSAYWERSSYGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAV DGEWQIVGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSV TWRFQPVGTVEFHDLVTFTRDGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEA GKYQCVAELWRRNYNNTWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLN CSVKSQTSPNSHFAVLWYVHKPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHV SGGLFSLTVQRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLS QVQGSLSVLETRQIQLECVVLNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGE QAAKNNLKGRLHAESPSSGVYRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAG QTAVTVMRPDAALQVDTVVPNATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGK RGSLGIDEQEEEEEEEDISQEEDSEDPTERTVLLSVGPDAVFGPEGSPWEGRLRFQRLSP LLYRLTVLEASPQDTGNYSCHVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLIC SNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTC LEPPVLSIHPGAID*
MSMv4 transcript	MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIY LPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYEC HTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLS VSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSD QGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEF RCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFV LKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLTDNWVVKVPQQHQ ILPQGHLESSISVEVASNASVVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNV MWLDRDGTLQPGSAYWERSSYGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAV DGEWQIVGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSV TWRFQPVGTVEFHDLVTFTRDGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEA GKYQCVAELWRRNYNNTWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLN CSVKSQTSPNSHFAVLWYVHKPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHV SGGLFSLTVQRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLS QVQGSLSVLETRQIQLECVVLNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGE QAAKNNLKGRLHAESPSSGVYRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAG QTAVTVMRPDAALQVDTVVPNATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGK RGSLGIDEQEEEEEEEDISQEEDSEDPTERTVLLSVGPDAVFGPEGSSWEGRLRFQRLSP LLYRLTVLEASPQDTGNYSCHVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLIC SNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTC LEPPVLSIHPGAID*
homology	99.92 (1215 / 1215)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Igsf3 (ENSMUSG00000042035)
Transcript ID	ENSMUST00000195164


..........AGCGGAGCCCCGAGCCCCTTTTCGGACCCTTTTCTTTGCCAGTGTCTCAG
ACTCAACCGCCGGGGAGGTAAAACAATAGCGGGCCACCTGGGACGCGGCGCGCCCCGGCT
CCCACGGTCGGCGCCCCGAGTCGCGGCCCCGCGCCAGCCCCGTGGCGACCCGCGCTGCCG
AGGGTGGGGCTGCCCGCCGCGCCCCGCTCCGTAAACCGTGACGGGAAAAGCCCGCGAGTG
AGAGAGGCATTTGGTGAAAGTGTTTTGAGAACAATCATAATTGCCCTGCTCTGGGCGGGG
AAACTGAGGCGTGGGGAACGGAAGGTAAGATTTGTACAAGGTCAGGATGCACACATGGGC
TGCCCTCGCCCAGGGAAGGGACCCAGGTGGCTCGGCTGGCCAGTCGGGTGCTTTGGCCTC
TCTCGGTTTTGCGGCGGTTGTGTTGGCCTTAGATAAATGTCTGTTGTGTTTGTTTTAGGA
ATCTGCGGGCTTTTGTGGGACCACTCTCGAGCTATCAAATGCCAGCTTACTTCGTGTGCC
CTGGGAGGTTCTGGGGCAGGTGACGGTACCGTGACCTCTCACTATGGATGGAGATGGACT
TTTTGATGAAGAAATCCGAAGTGTCTTTACCAATCCGGGTGTTTTGGCTGTCTTGGGTTT
TGAAAAAACCTGCCTGGTTCCCTTTGGGGGATCCGAATGAGCGATCTCAGACACCTTCAC
TGCGAAGCCAAGGACATTTCTGTATAATCAGCGCATGAAAGGATTTTCTCAGACTCTTTC
CTCCCGTTTTCCTCGAGGATTAATCCACCAGAATCCATAGTTCCGGTGGAGTCTGCAAGG
CATATACAATGTGGCAGAAACCTTGAGCGCCTTCGGAATTGCTCTGGCCCCTGCCTTAGG
CATAGAGGACTCTATTGCACACGCCACGCCACTCCCCTCCCCTGCCCCCAACTCCCTCCT
TCTGACTACTCTGTCTTTGACTGGCTCTCATTTTCCCTGTGAAGTTCTGT
TTCCAAACTGTTCCCTGGAGCTATAAGTGGATTGGCAGTAATGAGAGATTAGGCGGTGGGAAAAGCACGGTGCCCTGTGCAGTGTCCTTTTCCTGCTGCCGCTGCCGCCGACATGAAGTGCTTTTTCCCAGTGTTGAGCTGTCTGGCTGTGCTGG
GTAAGTGACTGCTTATCAGTTCTAT..........GGTTGCTGTGTCTGTCTCCCCTTAG
GTGTTGTGTCAGCGCAGCGACAGGTCACCGTCCAGGAAGGGCCCTTGTACCGCACAGAGAGCTCTCACATCACCATCTGGTGCAACGTGAGTGGCTACCAGGGTCCCTCTGAGCAGAACTTCCAGTGGTCCATTTACCTGCCCTCTGCTCCAGAGCGTGAAGTACAGATCGTTAGCACGGTGGACTCTTCCTTCCCGTACGCCATCTACACCCAGCGAGTCCGCGGTGGGAAGATCTATGTGGAGAGGATCCAGGGCAACTCAGCCTTACTTCACATCACAGACCTGCAAGCCCGGGATGCTGGCGAGTATGAATGTCACACCCCCAACACCGATGAGCGATACTTTGGGAGTTACAGTGCCAAGATGAACCTAGTGG
GTAAGTGACTCTGCCTCCGCATGGC..........TCCATGGGAACATTCTATGTTACAG
TGATCCCAGATTCTCTGCAGACCACGGCTGTCCCCCAGACACTGCACAAAGTGGAACAGGATCCCCTGGAGCTCAGCTGCGAAGTGGCCACCGAGACCGTCCAGCACACCCACCTCTCGGTATCCTGGCTGCGGCAGAAGGGTGGCGAGAACCCTGTGGAGGTCATTTCCCTGAGCCGAGACTTCATCCTGCACTCCAGCAGCGAATATGCCCAGAGGCAGAGCCTGGGCGAGGTGCGGCTGGACAAGCTGGGGAGAAGCACCTTCCGTCTCACCATCTTCCACCTGCAGCCTTCCGACCAGGGCGAGTTCTACTGCGAGGCTGCGGAGTGGATCCAGGATCCAGATGGCTCTTGGTACGCCATGACCAGGAAGCGCTCCGAGGGTGCCGTGGTCAACGTCCAGCCCACTG
GTCAGTGTCCCTCAGCTTTTTGTCC..........GCATCCAGTTTGTTTGTGTTCCCAG
ACAAAGAGTTCACCGTGCGTCTGGAAACAGATAAGAGGCTGCACACGGTGGGTGAGCCGGTGGAGTTCAGATGTATCCTAGAGGCTCAGAACATTCCCGACCGGTACTTTGCCGTCTCCTGGGCCTTCAACAGCTCACTCATTGCCACCATGGGGCCTAATGCCGTGCCAGTCCTCAACAGCGATTTTGCCCACCGCGAAGCCAAGGGACAGCTTAAGGTGGCCAAAGAGAGTGATGGTGTCTTTGTGCTGAAGATATACCACCTCCGCCAGGAAGACAGTGGCAAATACAACTGCCGGGTGACTGAGCGAGAGAAGACTGTCACTGGCGAGTTCATAGACAAGGAGAGCAAGCGGCCCAAGAACATCCCCATCGTCGTGCTCCCCCTCA
GTAAGTAGAAGTGCGCCACTTACTC..........GTGGCCTGCTATATTGCTTTTCCAG
CAGATAACTGGGTAGTTAAAGTCCCCCAGCAGCACCAGATCCTGCCCCAAGGCCACTTGG
GTAAGTCTACTGAAGAACAACAATC..........GTGTGGCCCTCTCTCTTCTCCCCAG
AAAGCAGCATCTCCGTGGAGGTGGCCAGCAATGCCAGTGTCGTCCTTGAGGGAGAGGACCTGCACTTCTCCTGCACTGTCCGCACAGTGGGCAGGCTGCAGGCCCGCTTCTCGGTCATCTGGCAGCTCGTGGATAGGCAGAACCGCCGCAGCAATGTCATGTGGCTAGACCGGGACGGCACCTTGCAGCCGGGCTCAGCGTACTGGGAGCGCAGCAGCTATGGAGGCATCCAGATGGAGCAGGTGCAGCCCAACTCCTTCAGCCTGGGCATCTTCAACAGCAGGAAGGAAGATGAGGGCCAGTATGAGTGCCACGTGACGGAGTGGGTTCGGGCCGTAGATGGAGAGTGGCAGATTGTGGGAGAGCGCCGCGCCAGTACCCTGGTCTCTATCACAGCCCTTG
GTGAGTGAGCAGTAGGACTGTGGCA..........GTTCATGTCTCTGCTCTCCCTACAG
AAACGGGCTTTGCGGTCACAGCTATCTCCCGGACACCAGGGGTCACCTACAGCGACTCCTTTGACTTGCAGTGCATCATCAAACCCCACTACCCGGCCAGAGTCCCCGTGTCTGTGACATGGAGGTTCCAGCCAGTGGGCACAGTGGAGTTCCATGACCTGGTGACCTTCACACGAGATGGAGGGGTTCAGTGGGGGGACAAGTCATCCACTTTCCGAACTCGGACTGCCATTGAGAAGGCTGAGTCCAGCAACAATGTCCGCCTGAGCATCAGCCGGGCCAGTGACACAGAGGCAGGCAAGTACCAGTGCGTGGCAGAGCTGTGGCGAAGGAATTACAACAATACGTGGACAAGGCTGGCGGAGAGGACGTCCAACCTGCTGGAGATTCGGGTGCTGCAGCCAG
GTGGGTGCTCAGCTCAGGCTCCAGG..........CTTATGTCACTCCTTCCCTTCACAG
TGACAAAGCTCCAGGTGAGCAAGTCGAAGAGAACCCTCACCCTGGTGGAAAACCGGGCAATTCAGCTGAACTGCTCAGTCAAGTCCCAGACCAGCCCGAACTCGCACTTCGCCGTGCTGTGGTATGTTCACAAACCCTCGGACGCGGACGGCAAGCTCATCCTCAAAACCACGCACAGCTCGGCCTTCGAGTACGGGACCTACGCCGAGGAGGAGGGCCTGCGAGGCCGGCTGCAGTTCGAGAGGCATGTGTCGGGGGGCCTGTTCAGCCTCACTGTGCAGCGAGCCGAGGTCAGCGACAGCGGTAGCTACTACTGCCACGTGGAGGAGTGGCTGCTGAGTCCCAACTATGCCTGGTACAAGCTGGCCGAGGAGGTTTCAGGGCGCACAGAGGTCACTGTGAAGCAGCCAG
GTGAGAATGGAAGGTGTGGCCGTCG..........AGTGTCTTTTTTCCTCCCTGTTCAG
ACAGCCGCCTGAAGCTCAGCCAAGTCCAGGGGAGCCTGTCTGTTCTGGAGACCCGGCAGATACAGCTGGAGTGTGTGGTCCTGAACCGCACCAGCGTGGCCTCCCAGCTCCTGGTGGAGTGGTTTGTATGGAAGCCCAACCACCCAGAGCGAGAAGTGGTGGCCCACCTGAGCCGAGATGCTACCTTCCACTATGGCGAACAGGCTGCCAAAAACAACCTGAAGGGGCGGCTGCACGCGGAGAGCCCGTCCTCCGGCGTGTACAGGCTCTTCATCCAGAATGTGGCGGTACAGGACAGCGGGACCTACAGCTGCCGAGTAGAGGAGTGGCTGCCCAGCCCCAGTGGTGTGTGGTATAAAAGGGCTGAGGACACGGCCGGACAGACAGCCGTCACAGTCATGCGACCCG
GTAAGGCCCTAGCCTTCGGTGTTTC..........TTCTCTGTTCCTTATCCCTCCCCAG
ACGCTGCCCTCCAGGTGGACACAGTGGTCCCCAATGCCACCGTAACTGAGAAGGCAGCTTTCCAACTGGACTGCAGCATCCTGTCTCGATCGAGCCAGGACTCCCGCTTTGCTGTGGCCTGGTATTCCCTAAGGACTAAAGGTGGAGGGAAAAGAGGCAGCCTTGGCATTGACGAGCAGGAGGAAGAGGAGGAGGAGGAGGACATATCGCAAGAAGAAGACTCTGAAGATCCGACAGAGAGGACAGTCCTGCTGAGCGTGGGACCTGATGCTGTCTTTGGTCCCGAAGGCAGTTCTTGGGAGGGCAGGCTGCGCTTCCAGAGGCTCTCACCTCTGCTGTACCGGCTCACTGTGCTCGAGGCGAGCCCCCAGGACACAGGCAACTACTCCTGCCATGTGGAGGAGTGGCTACCAAGCCCTCAGAAGGAATGGTACCGGCTGACAGAGGAGGAGTCTGCCCCCATTGGCATCCGGGTTCTAGACACAA
GTGAGTTTCCCCAGTTACAGAGGAG..........CTCATGGTTCCTTGCTGCCTTCCAG
GTTCAACCCTGCAGTCGCTCATCTGCTCCAACGATGCCCTCTTCTACTTTGTCTTCTTCTACCCTTTCCCCATCTTTGGCATCCTCATCATCACCATTCTGCTGGTGCGCTTCAAAAGCCGGAACTCCAGCAAGAACTCAGAGGGGAAGAACGGGGTGCCCCTGTTGTGGATCAAGGAGCCGCACCTGAACTACTCCCCGACTTGCCTGGAGCCTCCGGTGCTCAGCATCCACCCGGGAGCCATAGACTAAAGAGGCTGCCCACCCCCAGCAGACGTTGCCCATGGCAGGGTCGGGTCAGGGGAGCCCTCTGGGCTTTTCCTCATTGCTTCGTGCTCTGTGATTGGACAGGCGACAGCACCTGAACTCTG
CAGTTTCTCTGCAGGAGCCAGTCAGACCTGGAACTTGTTGGAAGCTTCCGGTCGAGGTGA
TGGTTGCCTCTGGGCGGCAGCCCTGGTTAGCTGATCACACCCAGGTGTCATGATGCCAAC
GTCCTAGGTTCCTAGTTTTTGGTTTTGGTAACTTAGTGCGTAGCTCCAGGTGCCGCATCT
ACTCGCCAGTCTAACTCACGTTCTCAGATCGGTGCTATGGGGTTTCCTGTGCTGTGTAAT
GTACTCTTTTAAGCCCCTTGGGTCCTCTCCTTTTGGATCCCATAATGTTGTGGAAGAGTT
TCTCTCACAACTGATAAGCAAGAGGAAGACGCCTTCATAGTAACAAGGATTCTCTTCCAA
GACATTTTTGTTTTTGCACATTTGAAAATGCCACCCGTGGATCAAAATATACCCAAACAT
TTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTACTTTCTTAGCAAGACTTGAA
AAATATGTGTAGCGTGGGCCCAATTTGTATCTTATCTCTTCCCTCAGCCGGAGTTGTTGG
AACCACTTTATAGTCAAGATGAAAGCATTGAATTTCGCTTCAAAGGACTGACTGCACATG
TGCAGAAGAAACCCTGCAGGACCCTATTAGGAGCAGATGGTGGCCAGCCAACCAGTCCGT
CAGGGAGGCAAAAAGGCTCAGTCCCATCATTGCCAAAAAAGAAAAAAAAAAAAATAATAA
TAAACGAGCCAACCTGAAGGAAGGGTCAAGGGCTCCAGGCGGCACCCAGTTTCTGAGGGT
TGCCCTGATGAAAGGCAATGACTGGGGATGAGGGGGGGACGGGTGGTTGTTGGCTTGGCT
TTGGCAAGCTTGGTCTCTTGACTTACCCCTGGGCAGGTAGCTTTCTTCTGTAGGTGCTTT
GCCAAATTTTCAAGGGGACATGTCTAGTGAAGCCTGAAGGGGCTGCCCTGAGTGGAGGGA
GCATTATGGCCAAAGTGGCCCCTGTGCACAGGCCCAGTGG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........AGCGGAGCCCCGAGCCCCTTTTCGGACCCTTTTCTTTGCCAGTGTCTCAG ACTCAACCGCCGGGGAGGTAAAACAATAGCGGGCCACCTGGGACGCGGCGCGCCCCGGCT CCCACGGTCGGCGCCCCGAGTCGCGGCCCCGCGCCAGCCCCGTGGCGACCCGCGCTGCCG AGGGTGGGGCTGCCCGCCGCGCCCCGCTCCGTAAACCGTGACGGGAAAAGCCCGCGAGTG AGAGAGGCATTTGGTGAAAGTGTTTTGAGAACAATCATAATTGCCCTGCTCTGGGCGGGG AAACTGAGGCGTGGGGAACGGAAGGTAAGATTTGTACAAGGTCAGGATGCACACATGGGC TGCCCTCGCCCAGGGAAGGGACCCAGGTGGCTCGGCTGGCCAGTCGGGTGCTTTGGCCTC TCTCGGTTTTGCGGCGGTTGTGTTGGCCTTAGATAAATGTCTGTTGTGTTTGTTTTAGGA ATCTGCGGGCTTTTGTGGGACCACTCTCGAGCTATCAAATGCCAGCTTACTTCGTGTGCC CTGGGAGGTTCTGGGGCAGGTGACGGTACCGTGACCTCTCACTATGGATGGAGATGGACT TTTTGATGAAGAAATCCGAAGTGTCTTTACCAATCCGGGTGTTTTGGCTGTCTTGGGTTT TGAAAAAACCTGCCTGGTTCCCTTTGGGGGATCCGAATGAGCGATCTCAGACACCTTCAC TGCGAAGCCAAGGACATTTCTGTATAATCAGCGCATGAAAGGATTTTCTCAGACTCTTTC CTCCCGTTTTCCTCGAGGATTAATCCACCAGAATCCATAGTTCCGGTGGAGTCTGCAAGG CATATACAATGTGGCAGAAACCTTGAGCGCCTTCGGAATTGCTCTGGCCCCTGCCTTAGG CATAGAGGACTCTATTGCACACGCCACGCCACTCCCCTCCCCTGCCCCCAACTCCCTCCT TCTGACTACTCTGTCTTTGACTGGCTCTCATTTTCCCTGTGAAGTTCTGT
1	EXON 1	101,378,338	101,378,492	-	1	155	TTCCAAACTGTTCCCTGGAGCTATAAGTGGATTGGCAGTAATGAGAGATTAGGCGGTGGG AAAAGCACGGTGCCCTGTGCAGTGTCCTTTTCCTGCTGCCGCTGCCGCCGACATGAAGTG CTTTTTCCCAGTGTTGAGCTGTCTGGCTGTGCTGG
	INTRON 1 - 2	101,378,493	101,425,450			46,958	GTAAGTGACTGCTTATCAGTTCTAT..........GGTTGCTGTGTCTGTCTCCCCTTAG
2	EXON 2	101,425,451	101,425,828	1	1	378	GTGTTGTGTCAGCGCAGCGACAGGTCACCGTCCAGGAAGGGCCCTTGTACCGCACAGAGA GCTCTCACATCACCATCTGGTGCAACGTGAGTGGCTACCAGGGTCCCTCTGAGCAGAACT TCCAGTGGTCCATTTACCTGCCCTCTGCTCCAGAGCGTGAAGTACAGATCGTTAGCACGG TGGACTCTTCCTTCCCGTACGCCATCTACACCCAGCGAGTCCGCGGTGGGAAGATCTATG TGGAGAGGATCCAGGGCAACTCAGCCTTACTTCACATCACAGACCTGCAAGCCCGGGATG CTGGCGAGTATGAATGTCACACCCCCAACACCGATGAGCGATACTTTGGGAGTTACAGTG CCAAGATGAACCTAGTGG
	INTRON 2 - 3	101,425,829	101,427,029			1,201	GTAAGTGACTCTGCCTCCGCATGGC..........TCCATGGGAACATTCTATGTTACAG
3	EXON 3	101,427,030	101,427,440	1	1	411	TGATCCCAGATTCTCTGCAGACCACGGCTGTCCCCCAGACACTGCACAAAGTGGAACAGG ATCCCCTGGAGCTCAGCTGCGAAGTGGCCACCGAGACCGTCCAGCACACCCACCTCTCGG TATCCTGGCTGCGGCAGAAGGGTGGCGAGAACCCTGTGGAGGTCATTTCCCTGAGCCGAG ACTTCATCCTGCACTCCAGCAGCGAATATGCCCAGAGGCAGAGCCTGGGCGAGGTGCGGC TGGACAAGCTGGGGAGAAGCACCTTCCGTCTCACCATCTTCCACCTGCAGCCTTCCGACC AGGGCGAGTTCTACTGCGAGGCTGCGGAGTGGATCCAGGATCCAGATGGCTCTTGGTACG CCATGACCAGGAAGCGCTCCGAGGGTGCCGTGGTCAACGTCCAGCCCACTG
	INTRON 3 - 4	101,427,441	101,431,203			3,763	GTCAGTGTCCCTCAGCTTTTTGTCC..........GCATCCAGTTTGTTTGTGTTCCCAG
4	EXON 4	101,431,204	101,431,593	1	1	390	ACAAAGAGTTCACCGTGCGTCTGGAAACAGATAAGAGGCTGCACACGGTGGGTGAGCCGG TGGAGTTCAGATGTATCCTAGAGGCTCAGAACATTCCCGACCGGTACTTTGCCGTCTCCT GGGCCTTCAACAGCTCACTCATTGCCACCATGGGGCCTAATGCCGTGCCAGTCCTCAACA GCGATTTTGCCCACCGCGAAGCCAAGGGACAGCTTAAGGTGGCCAAAGAGAGTGATGGTG TCTTTGTGCTGAAGATATACCACCTCCGCCAGGAAGACAGTGGCAAATACAACTGCCGGG TGACTGAGCGAGAGAAGACTGTCACTGGCGAGTTCATAGACAAGGAGAGCAAGCGGCCCA AGAACATCCCCATCGTCGTGCTCCCCCTCA
	INTRON 4 - 5	101,431,594	101,432,914			1,321	GTAAGTAGAAGTGCGCCACTTACTC..........GTGGCCTGCTATATTGCTTTTCCAG
5	EXON 5	101,432,915	101,432,974	1	1	60	CAGATAACTGGGTAGTTAAAGTCCCCCAGCAGCACCAGATCCTGCCCCAAGGCCACTTGG
	INTRON 5 - 6	101,432,975	101,435,330			2,356	GTAAGTCTACTGAAGAACAACAATC..........GTGTGGCCCTCTCTCTTCTCCCCAG
6	EXON 6	101,435,331	101,435,732	1	1	402	AAAGCAGCATCTCCGTGGAGGTGGCCAGCAATGCCAGTGTCGTCCTTGAGGGAGAGGACC TGCACTTCTCCTGCACTGTCCGCACAGTGGGCAGGCTGCAGGCCCGCTTCTCGGTCATCT GGCAGCTCGTGGATAGGCAGAACCGCCGCAGCAATGTCATGTGGCTAGACCGGGACGGCA CCTTGCAGCCGGGCTCAGCGTACTGGGAGCGCAGCAGCTATGGAGGCATCCAGATGGAGC AGGTGCAGCCCAACTCCTTCAGCCTGGGCATCTTCAACAGCAGGAAGGAAGATGAGGGCC AGTATGAGTGCCACGTGACGGAGTGGGTTCGGGCCGTAGATGGAGAGTGGCAGATTGTGG GAGAGCGCCGCGCCAGTACCCTGGTCTCTATCACAGCCCTTG
	INTRON 6 - 7	101,435,733	101,439,374			3,642	GTGAGTGAGCAGTAGGACTGTGGCA..........GTTCATGTCTCTGCTCTCCCTACAG
7	EXON 7	101,439,375	101,439,779	1	1	405	AAACGGGCTTTGCGGTCACAGCTATCTCCCGGACACCAGGGGTCACCTACAGCGACTCCT TTGACTTGCAGTGCATCATCAAACCCCACTACCCGGCCAGAGTCCCCGTGTCTGTGACAT GGAGGTTCCAGCCAGTGGGCACAGTGGAGTTCCATGACCTGGTGACCTTCACACGAGATG GAGGGGTTCAGTGGGGGGACAAGTCATCCACTTTCCGAACTCGGACTGCCATTGAGAAGG CTGAGTCCAGCAACAATGTCCGCCTGAGCATCAGCCGGGCCAGTGACACAGAGGCAGGCA AGTACCAGTGCGTGGCAGAGCTGTGGCGAAGGAATTACAACAATACGTGGACAAGGCTGG CGGAGAGGACGTCCAACCTGCTGGAGATTCGGGTGCTGCAGCCAG
	INTRON 7 - 8	101,439,780	101,450,883			11,104	GTGGGTGCTCAGCTCAGGCTCCAGG..........CTTATGTCACTCCTTCCCTTCACAG
8	EXON 8	101,450,884	101,451,294	1	1	411	TGACAAAGCTCCAGGTGAGCAAGTCGAAGAGAACCCTCACCCTGGTGGAAAACCGGGCAA TTCAGCTGAACTGCTCAGTCAAGTCCCAGACCAGCCCGAACTCGCACTTCGCCGTGCTGT GGTATGTTCACAAACCCTCGGACGCGGACGGCAAGCTCATCCTCAAAACCACGCACAGCT CGGCCTTCGAGTACGGGACCTACGCCGAGGAGGAGGGCCTGCGAGGCCGGCTGCAGTTCG AGAGGCATGTGTCGGGGGGCCTGTTCAGCCTCACTGTGCAGCGAGCCGAGGTCAGCGACA GCGGTAGCTACTACTGCCACGTGGAGGAGTGGCTGCTGAGTCCCAACTATGCCTGGTACA AGCTGGCCGAGGAGGTTTCAGGGCGCACAGAGGTCACTGTGAAGCAGCCAG
	INTRON 8 - 9	101,451,295	101,455,104			3,810	GTGAGAATGGAAGGTGTGGCCGTCG..........AGTGTCTTTTTTCCTCCCTGTTCAG
9	EXON 9	101,455,105	101,455,512	1	1	408	ACAGCCGCCTGAAGCTCAGCCAAGTCCAGGGGAGCCTGTCTGTTCTGGAGACCCGGCAGA TACAGCTGGAGTGTGTGGTCCTGAACCGCACCAGCGTGGCCTCCCAGCTCCTGGTGGAGT GGTTTGTATGGAAGCCCAACCACCCAGAGCGAGAAGTGGTGGCCCACCTGAGCCGAGATG CTACCTTCCACTATGGCGAACAGGCTGCCAAAAACAACCTGAAGGGGCGGCTGCACGCGG AGAGCCCGTCCTCCGGCGTGTACAGGCTCTTCATCCAGAATGTGGCGGTACAGGACAGCG GGACCTACAGCTGCCGAGTAGAGGAGTGGCTGCCCAGCCCCAGTGGTGTGTGGTATAAAA GGGCTGAGGACACGGCCGGACAGACAGCCGTCACAGTCATGCGACCCG
	INTRON 9 - 10	101,455,513	101,457,622			2,110	GTAAGGCCCTAGCCTTCGGTGTTTC..........TTCTCTGTTCCTTATCCCTCCCCAG
10	EXON 10	101,457,623	101,458,108	1	1	486	ACGCTGCCCTCCAGGTGGACACAGTGGTCCCCAATGCCACCGTAACTGAGAAGGCAGCTT TCCAACTGGACTGCAGCATCCTGTCTCGATCGAGCCAGGACTCCCGCTTTGCTGTGGCCT GGTATTCCCTAAGGACTAAAGGTGGAGGGAAAAGAGGCAGCCTTGGCATTGACGAGCAGG AGGAAGAGGAGGAGGAGGAGGACATATCGCAAGAAGAAGACTCTGAAGATCCGACAGAGA GGACAGTCCTGCTGAGCGTGGGACCTGATGCTGTCTTTGGTCCCGAAGGCAGTTCTTGGG AGGGCAGGCTGCGCTTCCAGAGGCTCTCACCTCTGCTGTACCGGCTCACTGTGCTCGAGG CGAGCCCCCAGGACACAGGCAACTACTCCTGCCATGTGGAGGAGTGGCTACCAAGCCCTC AGAAGGAATGGTACCGGCTGACAGAGGAGGAGTCTGCCCCCATTGGCATCCGGGTTCTAG ACACAA
	INTRON 10 - 11	101,458,109	101,459,786			1,678	GTGAGTTTCCCCAGTTACAGAGGAG..........CTCATGGTTCCTTGCTGCCTTCCAG
11	EXON 11	101,459,787	101,460,156	1	-	370	GTTCAACCCTGCAGTCGCTCATCTGCTCCAACGATGCCCTCTTCTACTTTGTCTTCTTCT ACCCTTTCCCCATCTTTGGCATCCTCATCATCACCATTCTGCTGGTGCGCTTCAAAAGCC GGAACTCCAGCAAGAACTCAGAGGGGAAGAACGGGGTGCCCCTGTTGTGGATCAAGGAGC CGCACCTGAACTACTCCCCGACTTGCCTGGAGCCTCCGGTGCTCAGCATCCACCCGGGAG CCATAGACTAAAGAGGCTGCCCACCCCCAGCAGACGTTGCCCATGGCAGGGTCGGGTCAG GGGAGCCCTCTGGGCTTTTCCTCATTGCTTCGTGCTCTGTGATTGGACAGGCGACAGCAC CTGAACTCTG
	3' upstream sequence						CAGTTTCTCTGCAGGAGCCAGTCAGACCTGGAACTTGTTGGAAGCTTCCGGTCGAGGTGA TGGTTGCCTCTGGGCGGCAGCCCTGGTTAGCTGATCACACCCAGGTGTCATGATGCCAAC GTCCTAGGTTCCTAGTTTTTGGTTTTGGTAACTTAGTGCGTAGCTCCAGGTGCCGCATCT ACTCGCCAGTCTAACTCACGTTCTCAGATCGGTGCTATGGGGTTTCCTGTGCTGTGTAAT GTACTCTTTTAAGCCCCTTGGGTCCTCTCCTTTTGGATCCCATAATGTTGTGGAAGAGTT TCTCTCACAACTGATAAGCAAGAGGAAGACGCCTTCATAGTAACAAGGATTCTCTTCCAA GACATTTTTGTTTTTGCACATTTGAAAATGCCACCCGTGGATCAAAATATACCCAAACAT TTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTACTTTCTTAGCAAGACTTGAA AAATATGTGTAGCGTGGGCCCAATTTGTATCTTATCTCTTCCCTCAGCCGGAGTTGTTGG AACCACTTTATAGTCAAGATGAAAGCATTGAATTTCGCTTCAAAGGACTGACTGCACATG TGCAGAAGAAACCCTGCAGGACCCTATTAGGAGCAGATGGTGGCCAGCCAACCAGTCCGT CAGGGAGGCAAAAAGGCTCAGTCCCATCATTGCCAAAAAAGAAAAAAAAAAAAATAATAA TAAACGAGCCAACCTGAAGGAAGGGTCAAGGGCTCCAGGCGGCACCCAGTTTCTGAGGGT TGCCCTGATGAAAGGCAATGACTGGGGATGAGGGGGGGACGGGTGGTTGTTGGCTTGGCT TTGGCAAGCTTGGTCTCTTGACTTACCCCTGGGCAGGTAGCTTTCTTCTGTAGGTGCTTT GCCAAATTTTCAAGGGGACATGTCTAGTGAAGCCTGAAGGGGCTGCCCTGAGTGGAGGGA GCATTATGGCCAAAGTGGCCCCTGTGCACAGGCCCAGTGG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Igsf3 (ENSMUSG00000042035)
Transcript ID	ENSMUST00000195164

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 1215 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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