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Target CDS Information

Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Cross Reference
EMBL AC132909, AC166238
GO GO:0000165, GO:0004111, GO:0004674, ...show all
goslim_goa GO:0000902, GO:0003674, GO:0005575, ...show all
MGI_trans_name Map4k4-017
OTTP OTTMUSP00000068930
OTTT OTTMUST00000127978
RefSeq_peptide_predicted XP_006496106.1
UCSC uc011wjx.1
UniParc UPI0003D770E9
Uniprot/SPTREMBL A0A0A6YWM8
Vega_transcript Map4k4-017, OTTMUST00000127978
Vega_translation 179110, OTTMUSP00000068930
Definition protein_id:ENSMUSP00000141613
translation:
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDR
FRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVPVRTTSRSP
VLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPG
SHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPADLTALAKELRA
VEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETES
VKTMIVHDDVESEPAMTPSKEGTLIVRQSTVDQKRASHHESNGFAGRIHLLPDLLQQSHS
SSTSSTSSSPSSSQPTPTMSPQTPQDKLTANETQSASSTLQKHKSSSSFTPFIDPRLLQI
SPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNS
EILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKD
KLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEV
YAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDI
YLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAY
IRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVY
FMTLGRTSLLSW

Chromosome 1
Length
Position(start - end)
123,481
39,901,230 - 40,024,712
Orient to Chromosome plus
Link Location : (1:39901230-40024712)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000195636
Reports
substitution
cSNPs9
Insertion79
Deletion119
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num9
non-synonymous num0
synonymous substitutions 39962219 (p.Val55Val), 39962225 (p.Asp57Asp), 39980595 (p.His151His), 39986727 (p.Gln292Gln), 40004869 (p.Gly611Gly), 40009813 (p.Glu751Glu), 40017165 (p.Gly987Gly), 40022800 (p.Phe1127Phe), 40022854 (p.His1145His),
non-synonymous substitutions
B6 transcript
(ENSMUST00000195636)
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDR
FRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVPVRTTSRSP
VLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPG
SHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPADLTALAKELRA
VEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETES
VKTMIVHDDVESEPAMTPSKEGTLIVRQSTVDQKRASHHESNGFAGRIHLLPDLLQQSHS
SSTSSTSSSPSSSQPTPTMSPQTPQDKLTANETQSASSTLQKHKSSSSFTPFIDPRLLQI
SPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNS
EILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKD
KLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEV
YAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDI
YLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAY
IRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVY
FMTLGRTSLLSW*
MSMv4 transcript
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDR
FRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVPVRTTSRSP
VLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPG
SHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPADLTALAKELRA
VEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETES
VKTMIVHDDVESEPAMTPSKEGTLIVRQSTVDQKRASHHESNGFAGRIHLLPDLLQQSHS
SSTSSTSSSPSSSQPTPTMSPQTPQDKLTANETQSASSTLQKHKSSSSFTPFIDPRLLQI
SPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNS
EILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKD
KLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEV
YAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDI
YLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAY
IRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVY
FMTLGRTSLLSW*
homology100.00 (1273 / 1273)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000195636
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........TGACCCGTGGTGATCTCCATCCAGGTACTGTCAGGGTTTTAGATCCCGAG
CAGAGGGCTCGCCCGTCCGCCCTCCCTCCCATGGGCCAAACTGGCTCGGGGAACACAGCA
GCGAGCAATCACAGCGACTGTTTTGGATTCTCCCGGACGGTCAAGTGATGCTCAGCGAAT
CCTCCAGCAGCAACCAAGCCACAAACTGAGACAGGAAAGGAGAAAGGAGAGGAACACCCC
TTGGGGGGTAAAAAGGAAACGAGGGTCTACGGGACCGACCGGCCGTAGGCGGCGGAGGGG
TCCGAGGCCCGACCCCGGCGCGTCCTGGCACACCCTCTCCCGGGCGAGCGGCGCGGGTGG
GGTGTCCACGGGGCCGCCGGGGCGCTCCGAGTCCTTCATTCATTGTTAGCGGAGGCTGGG
GTGTTCCGCCGCGCCCCGCACTTCCTCCGGGAAGGCCCCGAGGGCTCCCGGCCCCACCCC
GGGCCGGGCCACCATCCGCGGAGGGCCCGCCGCCCGGCCATTGTTCGAGCCCCACCCCTG
CTGAATATTCACGCGGGCGGGCGGCGAGCGAGCGAGGGCGAGGGCCGGGTTCCGCCCGCT
CTCCCGGCGGAGGGGGCGGGGGAGTCGCTCGCCCCTCCTCAGCGGCGCCGGTCGGTGCCC
CGCGTCCCCGCCCCCGCCCCCGCCTCCCGCGGCATCTTTGTCTCGCGGCCTCGCGCTCGC
TCGCTCGCCGCGCTCTCCGGCCCCAGCTCCGGGCCGCTCGTGCAGGCGCGCGCGCGCGGG
GCGCCGGGGCCTGAGGCGGCGGGCGACGCCCGGGGGGCGGGTGGGGGCCGAGGGAGGACC
GCCAAGCCATGGTGTGAGCTCCGCGGCCAGCGCTCGCCGCGCCGCGCTCCGCTCCGACCG
GACGACAAGCCGCCCGGGCGGCGGCGGCCTGCCCGTGCGGCCCGAGCCCCGGCGCCGCCG
AGCCCCTGCCCGTCTCTCGCTCTCTCGCCCGCTCCCGGAGCGGCGACCCG
1 EXON 1 39,901,224 39,901,286 - 0 63
GGGAAGATGGCGAACGACTCTCCCGCGAAGAGCCTGGTGGACATTGACCTGTCGTCCCTG
CGG
INTRON 1 - 2 39,901,287 39,901,508 222
GTGAGTGCGGCCGCGCCCTGCGCGC..........TAACCTCCCCCTCCTCTCTCTCCAG
2 EXON 2 39,901,509 39,901,574 0 0 66
GACCCTGCTGGGATTTTTGAGCTGGTGGAAGTGGTTGGAAATGGCACCTATGGACAAGTC
TATAAG
INTRON 2 - 3 39,901,575 39,962,177 60,603
GTCGGTGTGGGGCGCCTTTGTTCCC..........CAGTCTTTGTTTTCTGTGTCTCCAG
3 EXON 3 39,962,178 39,962,234 0 0 57
GGTCGACATGTTAAAACGGGTCAGCTGGCCGCCATCAAGGTCATGGATGTCACCGAG
INTRON 3 - 4 39,962,235 39,973,926 11,692
GTAAGGCTGGACCGCACTTGTTGAT..........CATGTTTTGTTACTTTTTTCCTAAG
4 EXON 4 39,973,927 39,974,052 0 0 126
GATGAAGAGGAAGAAATCAAACTGGAGATAAATATGCTGAAGAAGTATTCTCATCATCGA
AATATTGCCACGTACTATGGTGCTTTCATTAAGAAGAGCCCTCCAGGACATGATGACCAA
CTCTGG
INTRON 4 - 5 39,974,053 39,976,706 2,654
GTAGGTAGATATGTGCAAGCCTTTG..........ACAACATGTCTTGTCTGCCTTGTAG
5 EXON 5 39,976,707 39,976,817 0 0 111
CTTGTTATGGAGTTTTGTGGGGCTGGGTCCATCACAGACCTTGTGAAGAACACCAAAGGG
AACACTCTCAAAGAAGACTGGATTGCTTACATCTCCAGGGAAATCCTCAGG
INTRON 5 - 6 39,976,818 39,980,559 3,742
GTAAGGAAAGCAGGAGCAACCTGTG..........GACTCAAATCTGCTTTTCTTTTCAG
6 EXON 6 39,980,560 39,980,650 0 1 91
GGATTGGCACATCTCCATATTCACCACGTTATTCATCGAGATATCAAGGGCCAAAATGTG
CTGCTGACCGAGAATGCTGAGGTGAAACTTG
INTRON 6 - 7 39,980,651 39,983,138 2,488
GTAGGTGGCCGGCCGGTGTGTGCCT..........CTTCTTCTTGCTTTTTGTTCCGTAG
7 EXON 7 39,983,139 39,983,269 1 0 131
TTGATTTTGGTGTAAGCGCTCAGCTGGACAGGACGGTTGGACGGAGAAATACGTTCATAG
GCACACCCTACTGGATGGCTCCAGAGGTCATCGCCTGTGATGAGAACCCAGACGCCACTT
ACGACTACAGA
INTRON 7 - 8 39,983,270 39,983,882 613
GTAAGAACACCCACCCCCTTGCCGG..........GGAATATTCTCTTTTGTTTTTGCAG
8 EXON 8 39,983,883 39,983,937 0 1 55
AGTGACCTCTGGTCCTGTGGCATCACAGCCATCGAGATGGCTGAAGGGGCCCCCC
INTRON 8 - 9 39,983,938 39,985,181 1,244
GTGAGTATCTTCCTTCCTTCTGAGC..........CTGACACCGCCATCTCCTTTCCCAG
9 EXON 9 39,985,182 39,985,260 1 2 79
CTCTCTGTGACATGCATCCAATGAGAGCGCTGTTTCTCATCCCCAGAAACCCTCCTCCCA
GGCTGAAGTCAAAAAAATG
INTRON 9 - 10 39,985,261 39,986,624 1,364
GTAAGCCCCACCTCCCCCTCCCTTC..........CAATATGTTTCACTTTCTCTTAAAG
10 EXON 10 39,986,625 39,986,800 2 1 176
GTCAAAGAAATTTTTCAGCTTTATAGAAGGCTGTCTGGTGAAGAATTACATGCAGCGGCC
CTCTACAGAGCAACTTTTAAAACACCCTTTCATAAGGGATCAACCCAATGAAAGGCAGGT
TCGAATCCAGCTTAAGGATCACATAGACCGGACCAGAAAGAAGAGAGGCGAGAAAG
INTRON 10 - 11 39,986,801 39,988,969 2,169
GTATGAAGGCTCCTTTAAGTTTGCC..........TGTTTCTCTCGGCCTTGTTTTTCAG
11 EXON 11 39,988,970 39,989,042 1 2 73
ATGAGACGGAGTACGAGTACAGCGGGAGCGAGGAGGAGGAGGAGGAAGTGCCTGAGCAGG
AGGGAGAGCCAAG
INTRON 11 - 12 39,989,043 39,990,088 1,046
GTACAGACGGCAGCCAGCTCAGGCT..........CCCTGACAGACCCTATCCCCTGCAG
12 EXON 12 39,990,089 39,990,299 2 0 211
TTCCATCGTCAATGTGCCTGGAGAGTCAACTCTGCGACGTGATTTCCTGAGACTGCAGCA
GGAGAACAAGGAGCGGTCTGAGGCTCTGCGGAGACAGCAGCTTCTGCAGGAGCAGCAGCT
CCGGGAGCAGGAGGAGTATAAGAGGCAGCTGCTGGCTGAGAGGCAGAAGCGGATTGAACA
GCAGAAAGAACAGAGGAGGCGGCTGGAAGAG
INTRON 12 - 13 39,990,300 39,997,020 6,721
GTAGAAAAGAGAAGTTCTGTGGGTT..........TAACTACACAGTTCTCCTTCTGCAG
13 EXON 13 39,997,021 39,997,182 0 0 162
CAACAAAGAAGAGAACGGGAAGCCAGGAGGCAGCAGGAGCGTGAGCAGCGGCGGCGTGAA
CAAGAGGAGAAGAGGCGTCTCGAGGAACTGGAAAGGCGGCGTAAAGAAGAGGAAGAGAGG
AGACGGGCAGAAGAGGAGAAGAGGAGAGTGGAGAGGGAACAG
INTRON 13 - 14 39,997,183 39,999,887 2,705
GTGAGCTTTCAAGAATGTTGACCCA..........CTGCTGGGTCATTTCTGTGTGACAG
14 EXON 14 39,999,888 39,999,974 0 0 87
GAGTACATCAGGCGGCAGCTAGAGGAGGAGCAGCGGCACCTGGAGATCCTGCAGCAGCAG
CTGCTCCAGGAGCAGGCCATGTTACTG
INTRON 14 - 15 39,999,975 40,000,623 649
GTAACGCCCCGTCTCTGTCCCGTTC..........ACAAGCATATCTCCTGTCTCTACAG
15 EXON 15 40,000,624 40,000,749 0 0 126
CACGACCACAGGAGGCCGCACGCACAGCAGCAGCCGCCGCCCCCGCAGCAGCAGGACAGG
AGCAAACCGAGCTTTCATGCTCCAGAGCCCAAGCCTCACTATGACCCTGCTGACAGAGCT
CGGGAG
INTRON 15 - 16 40,000,750 40,001,429 680
GTACCTGCTTTCCCTCTTGCTTACA..........CGTGTCTTCTAATTCTCTGACGCAG
16 EXON 16 40,001,430 40,001,591 0 0 162
GTGGAAGATAGATTTAGAAAGACTAACCACAGCTCCCCTGAGGCCCAGGCTAAGCAAACG
GGCAGAGGACTGGAGCCACCCGTGCCTTCCCGGTCAGAGTCTTTTTCCAATGGCAACTCC
GAGTCTGTGCACCCTGCCCTGCAGAGACCAGCGGAGCCACAG
INTRON 16 - 17 40,001,592 40,004,806 3,215
GTAGCAGCAGTAGCTCCCTGTGCCA..........TAACTGCTGTGTTTCCTACCTAAAG
17 EXON 17 40,004,807 40,004,913 0 2 107
GTTCCCGTGAGAACGACCTCTCGTTCCCCTGTCCTCTCCCGTCGGGATTCCCCACTGCAG
GGTGGTGGACAGCAGAATAGCCAAGCAGGACAGAGAAATTCCACCAG
INTRON 17 - 18 40,004,914 40,006,670 1,757
GTAAAAAAAGAGAACTGACAGGAGG..........ACACCGTTCTCTCCTTTTCTAACAG
18 EXON 18 40,006,671 40,006,822 2 1 152
CAGTATTGAGCCCCGGCTTCTTTGGGAGAGAGTGGAAAAGCTGGTCCCCAGGCCAGGCAG
TGGCAGCTCTTCAGGGTCCAGCAACTCAGGATCCCAGCCTGGCTCCCATCCTGGGTCTCA
GAGCGGCTCCGGTGAACGCTTCAGAGTGAGAT
INTRON 18 - 19 40,006,823 40,007,432 610
GTAGGCTATCTCTCCTACACACTTT..........TTTTTGTCTCTCCTGAACGTACCAG
19 EXON 19 40,007,433 40,007,530 1 0 98
CATCATCCAAGTCTGAAGGTTCTCCATCGCCACGCCAGGAAAGTGCAGCCAAAAAGCCTG
ACGATAAGAAAGAAGTATTCCGGCCTCTCAAGCCTGCG
INTRON 19 - 20 40,007,531 40,009,687 2,157
GTAAGTACTGTGTAAAATCACTTAG..........CTTCCTTTTCCTTCCTGTGTCTTAG
20 EXON 20 40,009,688 40,009,863 0 2 176
GACTTGACTGCGTTGGCCAAAGAGCTTCGAGCAGTGGAAGATGTTCGGCCACCTCACAAA
GTAACAGACTACTCATCCTCCAGTGAGGAGTCTGGGACCACAGATGAGGAGGAGGAGGAC
GTGGAGCAGGAGGGGGCTGATGATTCTACCTCGGGACCAGAAGACACCAGAGCAGC
INTRON 20 - 21 40,009,864 40,010,556 693
GTTAGTGCTTGCTGGGCTCAAGAGA..........TGACTTGCAGATCTTGTCTCTTCAG
21 EXON 21 40,010,557 40,010,677 2 0 121
GTCATCTCCGAACCTGAGCAACGGTGAAACAGAATCTGTGAAAACAATGATCGTTCATGA
TGATGTAGAAAGTGAGCCAGCCATGACCCCGTCCAAGGAGGGCACCCTCATCGTCCGCCA
G
INTRON 21 - 22 40,010,678 40,011,649 972
GTACCGGAGCCTCCTCTCCTGTTGT..........ACCAGTGTGCCTGTTTTTTCTACAG
22 EXON 22 40,011,650 40,011,841 0 0 192
AGTACAGTTGACCAAAAGCGTGCCAGCCATCATGAGAGCAATGGCTTTGCGGGTCGCATT
CACCTCTTGCCAGATCTCTTACAGCAAAGCCATTCCTCCTCCACTTCCTCCACCTCTTCC
TCCCCATCCTCCAGCCAGCCGACACCCACCATGTCCCCACAGACACCCCAGGACAAGCTC
ACTGCTAATGAG
INTRON 22 - 23 40,011,842 40,014,105 2,264
GTATGTCTCACACCACAGCTGGCTG..........AATGAAATTGAAATTTACATTTCAG
23 EXON 23 40,014,106 40,014,223 0 1 118
ACTCAGTCCGCTAGTAGCACACTCCAGAAACACAAATCTTCCTCCTCCTTTACACCTTTT
ATAGACCCCAGGTTACTACAGATCTCTCCATCTAGTGGGACGACAGTGACTTCCGTGG
INTRON 23 - 24 40,014,224 40,014,526 303
GTAAGTACAGCAGCGCCAAGGAGAG..........GAGTCTTCACTGCACTGTGTTTCAG
24 EXON 24 40,014,527 40,014,697 1 1 171
TGGGATTTTCCTGTGATGGGCTGAGACCAGAAGCCATAAGGCAAGATCCTACTCGGAAAG
GCTCAGTGGTCAATGTGAACCCCACGAACACTAGGCCACAGAGTGATACCCCCGAGATTC
GTAAATACAAGAAGAGATTTAACTCAGAGATCCTGTGTGCTGCCTTATGGG
INTRON 24 - 25 40,014,698 40,017,109 2,412
GTAGGTACCTCACTGCTGTCGGGTG..........TAGGCCTTTCTGTGTTTTTGAACAG
25 EXON 25 40,017,110 40,017,253 1 1 144
GAGTGAACTTGCTGGTTGGTACAGAGAGCGGTCTGATGCTCTTGGACAGAAGTGGTCAAG
GGAAAGTATACCCTCTGATCAGCCGAAGACGGTTCCAGCAAATGGATGTGCTCGAAGGCC
TAAATGTCCTGGTGACAATATCTG
INTRON 25 - 26 40,017,254 40,019,543 2,290
GTGAGTGTTCTTTAAAGCAGAATCA..........AAAATACTTCTGTTTATCTTGTTAG
26 EXON 26 40,019,544 40,019,678 1 1 135
GCAAAAAGGATAAGTTACGTGTCTACTATTTATCCTGGCTAAGAAATAAGATTCTTCATA
ATGATCCAGAGGTTGAGAAGAAGCAGGGGTGGACCACTGTGGGCGACTTGGAAGGGTGCG
TGCACTATAAAGTCG
INTRON 26 - 27 40,019,679 40,021,083 1,405
GTGAGTGCTCCGGGGGGCCTTGCTC..........CTCTTGCTTTTTATGTTTGTTTCAG
27 EXON 27 40,021,084 40,021,184 1 0 101
TAAAATATGAAAGAATCAAGTTTCTGGTAATTGCTTTGAAGAGTTCTGTGGAAGTCTATG
CATGGGCACCGAAGCCATATCACAAATTTATGGCCTTTAAG
INTRON 27 - 28 40,021,185 40,022,704 1,520
GTAAAACTGCCAGTTTTAAGTTGGC..........GCTTCTGTCTTGATTCCCTCTGTAG
28 EXON 28 40,022,705 40,022,854 0 0 150
TCATTTGGAGAACTGCTACATAAGCCATTACTGGTGGATCTCACTGTGGAGGAAGGCCAG
AGGTTGAAAGTGATCTATGGATCCTGTGCGGGATTTCATGCTGTTGATGTGGATTCAGGC
TCAGTCTATGACATTTATCTACCAACACAC
INTRON 28 - 29 40,022,855 40,023,359 505
GTAAGAAAGAACCCACACTCTATGG..........CTGCTTCCCTGTTCCTGTTCTCTAG
29 EXON 29 40,023,360 40,023,519 0 1 160
ATTCAGTGTAGCATCAAACCCCATGCAATCATTATCCTCCCCAACACGGATGGGATGGAG
CTGCTGGTGTGCTACGAAGACGAGGGGGTTTACGTTAACACGTACGGAAGGATCACCAAG
GACGTGGTTCTGCAGTGGGGAGAGATGCCGACATCTGTAG
INTRON 29 - 30 40,023,520 40,024,309 790
GTATGACACGTCGTGACGAGGCTTC..........CTCTCTCTCTCTCTCTCTCTCAAAG
30 EXON 30 40,024,310 40,024,449 1 0 140
CATATATCCGGTCGAATCAGACAATGGGCTGGGGAGAGAAGGCAATAGAGATACGATCTG
TGGAAACTGGTCACTTGGATGGTGTATTTATGCACAAAAGGGCTCAGAGACTAAAGTTCC
TGTGTGAACGCAATGACAAG
INTRON 30 - 31 40,024,450 40,024,628 179
GTAAAGCTCCCTTATGGCGTCTGGG..........ACTGTGTCCTCTCATTGTGTTGCAG
31 EXON 31 40,024,629 40,024,969 0 - 341
GTGTTCTTTGCCTCCGTCCGCTCTGGTGGCAGCAGCCAGGTCTATTTCATGACCTTAGGC
AGGACTTCTCTTCTGAGCTGGTAGAGGCAGTGTGAGCTGGGATCACTGACCTCTGGAGTC
GGCAAGACCCTGAGCGAGACCTTGGAATTCCTTGCAACTGGAGCTCAGAGCTGTGCTGGT
GCAGCCAGGACAGCTGTCTGCAGGCCACCTGCGCGTCGCATCGGGTCGGGTCGGGCCCTC
TCCCCTCCCTCCTACACTTTTTGCCAGTTTATTCCCATTCTCTCCTTTTCCTTTCTCAAA
TAAATCAAGGCTGCGTTGCAGCTGGTGCTGTCTGGACTCCA
3' upstream sequence
CCATCGGTGCTAGGAGTGCTTGGGAATGGACTCAGACCGGGAAGGAAGAGCGAGCGAGCA
AGCGCTGCGCCTTCCCTGCAGCTCCAGGAGGCCGTCTCCGAGCGAGCGAGCGAGCGAGCG
ACTGTCCTATGGGTGTCTGAAGGGTGTGATGAGCGCACCGTCAGACTTTGGCAGTGGGCA
CAAAGAAGTGAAAAGTGGGCGTAAGAAGCAGCTTGCAGAAGCAGAGAACAGATTTAATAT
AGTAACATTAACAATGTATTTAATTGACATTTCTCTTTTTGTAATGTGACAGTATGTGGA
CAGAGAAGAAGGTGCAGGTTTAAGAAGTTAATATTTATAAAATGTGAAAGACACAGTTAC
TAGGATACCTTTTTTTTGTGGGTGGGGCTTAGGGTGGGGTGGGGTGGGTTAAAGGGTCCC
ATTTTGTTTCTTTGAAAGTTTTTTGGAGGGGGTTGTCCTGGCCAAGAACTCAGTCATTTT
TCTGTGTACCAAGTTTTGCCTAAATTGTGCAGGTGGTTCTTAAAAAAGAAAGAAAAGGAA
AAGAAAAGTGTGTGTCTTGTTGGAGGGCCAGAAGTTTGTCCTGTGACAGTATTAGCCCGG
CCTCGGCTACAGGTTTAAAGTCTGTTAGGCCTAAGTGCAGCTCCCCGTGGCCTGCACACA
CCGTAGGAGAAGGTCAGCTTTCCTGTGGGGTTTTGTTTCATTTTGTTTTGTTTTTTGCCT
ACCTCACTGTTTTTAATGCATTGAGAGGTGACTTAGTTTATGGTTTTGGCAGAAAACATT
AATGTTTAATTTAACCTTAATACCAAAACTATCTGATTAAAGTTTGACTTTGTCACAAGT
CTAAATCAGGTACAAAAAAGGAAAAAAACAAAAAATAAAAAACAAGCCTGTCTATGACAG
CAGGGAGTAGCCTTGTAGCTGCTGCAGTCTGCTTCTAGCATGCAGACTGCTCTGTTCTCA
CCAAGTTCACCATTAGCGGGTGACAGGCAGCCAGCTGCCA..........

Sequence Detail Report

Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000195636
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1273 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information