top page

Tutorials are available here.

Target CDS Information

Gene Symbol (Gene ID) Il6ra (ENSMUSG00000027947)
Cross Reference
EMBL AC102392
GO GO:0004896, GO:0016020, GO:0019221
goslim_goa GO:0003674, GO:0004871, GO:0005575, ...show all
MGI_trans_name Il6ra-001
OTTP OTTMUSP00000070563
OTTT OTTMUST00000132340
RefSeq_peptide NP_001297605.1
UCSC uc008qag.1
UniParc UPI0000F4DE1D
Uniprot/SPTREMBL A0A0G2JGF1
Vega_transcript Il6ra-001, OTTMUST00000132340
Vega_translation 187748, OTTMUSP00000070563
Definition protein_id:ENSMUSP00000143541
translation:
MLTVGCTLLVALLAAPAVALVLGSCRALEVANGTVTSLPGATVTLICPGKEAAGNVTIHW
VYSGSQNREWTTTGNTLVLRDVQLSDTGDYLCSLNDHLVGTVPLLVDVPPEEPKLSCFRK
NPLVNAICEWRPSSTPSPTTKAVLFAKKINTTNGKSDFQVPCQYSQQLKSFSCQVEILEG
DKVYHIVSLCVANSVGSKSSHNEAFHSLKMVQPDPPANLVVSAIPGRPRWLKVSWQHPET
WDPSYYLLQFQLRYRPVWSKEFTVLLLPVAQYQCVIHDALRGVKHVVQVRGKEELDLGQW
SEWSPEVTGTPWIEPRTTPAGILWNPTQVSVEDSANHEDQYESSTEATSVLAPVQESSSM
SLPTFLVAGGSLAFGLLLCVFIILRLKQKWKSEAEKESKTTSPPPPPYSLGPLKPTFLLV
PLLTPHSSGSDNTVNHSCLGVRDAQSPYDNSNRDYLFPR

Chromosome 3
Length
Position(start - end)
41,877
89,871,161 - 89,913,039
Orient to Chromosome minus
Link Location : (3:89871161-89913039)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Il6ra (ENSMUSG00000027947)
Transcript ID ENSMUST00000197679
Reports
substitution
cSNPs6
Insertion51
Deletion48
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num4
non-synonymous num2
synonymous substitutions 89887047 (p.Asn202Asn), 89887167 (p.Cys162Cys), 89887194 (p.Asn153Asn), 89890394 (p.Asn55Asn),
non-synonymous substitutions 89885977 (p.Val289Ile), 89890354 (p.Glu69Lys),
B6 transcript
(ENSMUST00000197679)
MLTVGCTLLVALLAAPAVALVLGSCRALEVANGTVTSLPGATVTLICPGKEAAGNVTIHW
VYSGSQNREWTTTGNTLVLRDVQLSDTGDYLCSLNDHLVGTVPLLVDVPPEEPKLSCFRK
NPLVNAICEWRPSSTPSPTTKAVLFAKKINTTNGKSDFQVPCQYSQQLKSFSCQVEILEG
DKVYHIVSLCVANSVGSKSSHNEAFHSLKMVQPDPPANLVVSAIPGRPRWLKVSWQHPET
WDPSYYLLQFQLRYRPVWSKEFTVLLLPVAQYQCVIHDALRGVKHVVQVRGKEELDLGQW
SEWSPEVTGTPWIEPRTTPAGILWNPTQVSVEDSANHEDQYESSTEATSVLAPVQESSSM
SLPTFLVAGGSLAFGLLLCVFIILRLKQKWKSEAEKESKTTSPPPPPYSLGPLKPTFLLV
PLLTPHSSGSDNTVNHSCLGVRDAQSPYDNSNRDYLFPR*
MSMv4 transcript
MLTVGCTLLVALLAAPAVALVLGSCRALEVANGTVTSLPGATVTLICPGKEAAGNVTIHW
VYSGSQNRKWTTTGNTLVLRDVQLSDTGDYLCSLNDHLVGTVPLLVDVPPEEPKLSCFRK
NPLVNAICEWRPSSTPSPTTKAVLFAKKINTTNGKSDFQVPCQYSQQLKSFSCQVEILEG
DKVYHIVSLCVANSVGSKSSHNEAFHSLKMVQPDPPANLVVSAIPGRPRWLKVSWQHPET
WDPSYYLLQFQLRYRPVWSKEFTVLLLPVAQYQCVIHDALRGVKHVVQIRGKEELDLGQW
SEWSPEVTGTPWIEPRTTPAGILWNPTQVSVEDSANHEDQYESSTEATSVLAPVQESSSM
SLPTFLVAGGSLAFGLLLCVFIILRLKQKWKSEAEKESKTTSPPPPPYSLGPLKPTFLLV
PLLTPHSSGSDNTVNHSCLGVRDAQSPYDNSNRDYLFPR*
homology99.57 (460 / 460)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Il6ra (ENSMUSG00000027947)
Transcript ID ENSMUST00000197679
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CGCTCAGGCCCATAGGTTTTATTTGTTTCTCATTACAGATGGTTGTGAGC
TACCATGTTGCTGGGATTTGAACTCATGATCTCCGGAAGTCAGTCAGTGCGTTTAACCGC
TGAGCCATCTCACCAGCCCTAAATTTTCTTTTCAGTGTGTTTCTTTCCCTCCGCATTTGC
ATGGGAAGCTGCCCTGTAGCTTCAAGCTCTGTAGCTTGGAAGGGAACCTTGGTGGAGTCT
GGTAAATAGCAAACGCCGGTGCCTTTGTGTCCAGTCAAGTCATGATGGGTAATCAAAGCC
CTACTCCTTGTTGAGTAGTTAGGCTCCAGGTACATCGACAGTGTTTCCAGGAATCTTTAT
CATGGGCTTAAAAATACATCTCTAATAGGTGAGAAAACTGAGACTTCCGGATCGGGATAG
CAATCTTGAGGAGGGTAACACATGTGTCTCTGGGCCAGACTCAAAAGCGCACACTGGTTT
CGTTGCCTCTGCAGCAGCCTTCAAAGAGCTGCTCCTCCACTGGAAGATGAGAGGAAATCT
TTTTCTCAGGTTATGGACGCCTAAGTTTTCCTTCAGACCAATTAAATCACAATCTCTGGG
CTCGAAGCAGACATCGGTGTCTTTTCGGATTCCCTGTTTGATTCCCGTAAGCACCCAGGA
CACTGACCTGCCTTCTACTTTAACAGCCAGAGCCAGTGGCTGGCGCTCATGAAAGCAAAA
CTCAAGCGGAGGCGCGGAGGGAAGGAAGGAGGGGGATATTTCTCCTTATCTCAGCGTCAA
AACCTGGGGAGGGGCCCTGGTGGGGGTCCCTGGGGGCTCAGGTGTGGCGCGGCTGCAGGA
AGTAACCCCCTCCGGTGGCCCGGAGCGCTGGCCGATTGCGCCATCCTACTGGGCTTTCGT
AACCGCAAGCCGGGGCTGCCAAGAGGAGCTTCAGCACCGGTTCCTCAAATGTTTCGCTGT
TGCCAGGACGGCCGGCTGCTGTGTGTCACGTGCATGTGGGAAGTCGCGCC
1 EXON 1 89,912,955 89,913,196 - 1 242
CACACCGATCTGAGCCACGCCGGGGCGAGCGCTCGCAGTGCGAGCTGAGTGTGGAGCCCG
AGGCCGAGGGCGACTGCTCTCGCTGCCCCAGTCTGCCGGCCGCCCGGCCCCGGCTGCGGA
GCTGCTCTGCCGCCCGCCGTCCCGCGTAGAAGGAAGCATGCTGACCGTCGGCTGCACGCT
GTTGGTCGCCCTGCTGGCCGCGCCCGCGGTCGCGCTGGTCCTCGGGAGCTGCCGCGCGCT
GG
INTRON 1 - 2 89,890,474 89,912,954 22,481
GTAAGAGGAACCCGGAGCGGGCGTG..........CTTACTTTGTGTTTTTCTTCCCCAG
2 EXON 2 89,890,237 89,890,473 1 1 237
AGGTGGCAAATGGCACAGTGACAAGCCTGCCAGGGGCCACCGTTACCCTGATTTGCCCCG
GGAAGGAAGCAGCAGGCAACGTTACCATTCACTGGGTGTACTCTGGCTCACAAAACAGAA
AATGGACTACCACAGGAAACACACTGGTTCTGAGGGACGTGCAGCTCAGCGACACTGGGG
ACTATTTATGCTCCCTGAATGATCACCTGGTGGGGACTGTGCCCTTGCTGGTGGATG
INTRON 2 - 3 89,889,311 89,890,236 926
GTGAGTTGTGCTGTCAGTGTCCTTG..........CCTCATCCTGCTGAGTCTCTTGCAG
3 EXON 3 89,889,187 89,889,310 1 2 124
TTCCCCCAGAGGAGCCCAAGCTCTCCTGCTTCCGGAAGAACCCCCTTGTCAACGCCATCT
GTGAGTGGCGTCCGAGCAGCACCCCCTCTCCAACCACGAAGGCTGTGCTGTTTGCAAAGA
AAAT
INTRON 3 - 4 89,887,207 89,889,186 1,980
GTAAGTGTCAGGTGGGGCTGTGCAC..........TGCCCTTCTCTGTTGTGTCCCACAG
4 EXON 4 89,887,022 89,887,206 2 1 185
CAACACCACCAATGGGAAGAGTGACTTCCAGGTGCCCTGCCAGTATTCTCAGCAGCTGAA
AAGCTTCTCCTGCCAGGTGGAGATCCTGGAGGGTGACAAAGTATACCACATAGTGTCACT
GTGCGTTGCAAACAGTGTGGGAAGCAAGTCCAGCCACAATGAAGCGTTTCACAGCTTAAA
AATGG
INTRON 4 - 5 89,886,709 89,887,021 313
GTAAGGGAGCTCCCGCTGCAGCTGC..........TAGAAGCCCTATTCCCTCTCCACAG
5 EXON 5 89,886,542 89,886,708 1 0 167
TGCAGCCGGATCCACCTGCCAACCTTGTGGTATCAGCCATACCTGGAAGGCCGCGCTGGC
TCAAAGTCAGCTGGCAGCACCCTGAGACCTGGGACCCGAGTTACTACTTGCTGCAGTTCC
AGCTTCGATACCGACCTGTATGGTCAAAGGAGTTCACGGTGTTGCTG
INTRON 5 - 6 89,886,044 89,886,541 498
GTAATTCATTTCCTTTGTTTGGAGA..........GGACTCACCATGTCTCCATCCTCAG
6 EXON 6 89,885,902 89,886,043 0 1 142
CTCCCGGTGGCCCAGTACCAATGCGTCATCCATGATGCCTTGCGAGGAGTGAAGCACGTG
GTCCAGATCCGTGGGAAGGAGGAGCTTGACCTTGGCCAGTGGAGCGAATGGTCCCCAGAG
GTCACGGGCACTCCTTGGATAG
INTRON 6 - 7 89,878,893 89,885,901 7,009
GTACCTGGGTCTATGTGGAGGGAGG..........CACTAACCCTTCCTTCTACCAGCAG
7 EXON 7 89,878,849 89,878,892 1 0 44
AGCCCAGGACCACCCCGGCAGGAATCCTCTGGAACCCCACACAG
INTRON 7 - 8 89,877,914 89,878,848 935
GTGAGCTTGCCCCCAGAAAGGGCCA..........TGATGGTGAGGGTCATCTCTCCTAG
8 EXON 8 89,877,844 89,877,913 0 1 70
GTCTCTGTTGAAGACTCTGCCAACCACGAGGATCAGTACGAAAGTTCTACAGAAGCAACG
AGTGTCCTCG
INTRON 8 - 9 89,876,909 89,877,843 935
GTAAGCGCTAGTGTCTTGCTATTCC..........TATCATTCCCTTCCCCTGCCCACAG
9 EXON 9 89,876,809 89,876,908 1 2 100
CCCCAGTGCAAGAATCCTCGTCCATGTCCCTGCCCACATTCCTGGTAGCTGGAGGAAGCT
TGGCGTTTGGGTTGCTTCTCTGTGTCTTCATCATCCTGAG
INTRON 9 - 10 89,871,387 89,876,808 5,422
GTGAGACGGGTCCTGTACTGTATTG..........TTTGTTTCTCTGTGTTTGTATAAAG
10 EXON 10 89,864,059 89,871,386 2 - 7,328
ACTCAAGCAGAAATGGAAGTCAGAGGCTGAGAAGGAAAGCAAGACGACCTCTCCTCCACC
CCCACCGTATTCCTTGGGCCCACTGAAGCCGACCTTCCTTCTGGTTCCTCTCCTCACCCC
ACACAGCTCTGGGTCTGACAATACCGTAAACCACAGCTGCCTGGGTGTCAGGGACGCACA
GAGCCCTTATGACAACAGCAACAGAGACTACTTATTCCCCAGATAATCATCTGGATGGTA
CCTGGCAGCTGGCAGGGCACCACGAGATCAGCACACAAGTTTCTCATGCGGGTCCCATCC
ACCTGGGGTGGGGTGGGGCGGGCGGGGCTGCAGCTTCACTAACCCACAAGAGCTCTGCAC
AGGTTCTGAGTAGGTGCAGCTGGTGCTGCATAGGCTCTGAAGGAAGGAAGGGGCTGTGAG
GAACACAGGCCATTGTGAAGACAGCTTGTGATGACTGAATAGAGATGCCCGTCAGCTCCA
CATCTGATAGTGGCTCACAAGCTGCACCCTCAGGAGGCCTCAGAAAGGGGCTCCAAAGGC
TGCCCCAGCTGCCTCGCTCTGCCTCACTGCCCCAAGCCACCTTTTAGCTCTCGAACTCCT
AAAGTCCAAGCACTTTGCCATTCTCTTTCCGAGGCCACTGAGGCCGGGTGGAAGCTTGGT
TCCGATTTCCTTCTCAACATCTGGAAAGCAGCTGGGCCCGGTGGTGGTGACTAATATCTC
AGGGCCTGATGGTTTACGCGAGTGACAATTTCTCACAAGCAGTTTTTAAATGTGAATGAT
GACCCCAGGCACTGCTGGCTGCGGAGGCTTCATTTTCCTCTTCGATCTCAGGACTTCAGG
CGAAAAGCGGAGTGGAAGTAGAGAGCGGATGGGTGTCCACCGTCCTCATGGTACTTGCGG
GAGGTACAGCCTGGAAAACACGTTTCCTGTCCCCCTACTCTCCCAGGAGAGGGATGATGG
TAGGGGGTGCCTCTTCCAGGGCGGAGAGAACTACTTTACCCCAGCCTTGCCCATTCTGAT
TTCAACTGGACTGGAGCTACTAGGAAAGTCGACATTCATGCAAAAAGAAAAAACGTTAAC
TAGCAAGAATGCACTTTCATTTTGGTTTTTAGAGAACTGTTGCCTGTTTCTCTCAAGAGT
CTGGAAGAGGCCGCTCACTGCACACTACTGTATGAACCCTCACTGCCCACCCTGGAGGAC
CAAGTGCAGTAACGGTAGCCCAAACACCAAGTCAAGTGAAAATCGAGGGAAAAAAAAAAC
AAACAAGCAACAAAAAAAAAAAACCAAAACTAAACTAAAAAACAAACCACCCCCCCAAAA
AAAACAAAACCAAAAACCAAAAAAAAACAAAAAAACAAAACAACAACAACAAAAAAAACC
CAAACCAACCCGCTGTTTCCTATAACAGAAAAGCCTTTGGTTTCATTTTTTATTTTGATT
TTTTTGTCTTAAAAAGTATAAAAATAGCCTGTCCATGCTCTGCTTCAGGGAATGAGCCTG
TGAACACTCCCAGGCGCAGGCAGGAAGGGTGTCTGCTTCCTGCTACACCTCACTGCCACC
TCGGCCTTCCTTGCTTTACGTTTGACTGAGTGGCCTCAGATGCTTTCCCCTGGGGCTTTG
AGGAATCCAGTGATGTTAGTGGTCACCGAGGAGACCACAGAGCCACAGTGTGGTGCTTAG
ATTAAAGTGACTTCTGCAACCACAGCACCCCACACCTGCCGTCTTACTGAACTATGCCAG
TAACTTGCCTTTTCTGCCACCACCAAGAGACGAGACGGGCAGAGCTCGGAAGCTGTCACC
CCATGCCCTCTGCTTGTCGGCTCTAGGGGCCACTGACCTAAGCATTAGTTATTTTATTTT
ATTTTATTTTTTTGTGGGTTTTGTACATTTTAGGTCCTGTTGCTGTCTTAGAAAAGGCTC
TGTAGGTTGACAGAAAATCAGGCCAAGTATTCATGTTTTGTTTTTTTTTTTTTTCCTTCT
TTCCTCCTTTGCTAAGTTTTTGGGACTCAAGGGTAGCAAAACTGCTGTGAAAGGGAAATT
TATTAAAAATGTTACAGATCGTGATCTTCAGGGGATCGGTGACTGTGCTCACTCACAGTT
CTTCAGTCTCTCACAGGGCTCTGCTGTTACCCAAGCCAGGCAGAGCAGGCAGACGGAAGA
CTGAAATCCAGATAGCTCATTATCTCTGTGAGTTAAATGGCTTTGATCTCCAAGTTGTTT
TCACTATTGTTGTAAGGGGATAGCCTCCCCCCAACCCGTATCAAAAGGATGCTTTTTCCT
TTTGACTTTTTATAAGCTAAGTCAACAAAGTCTGTTTCGTCCGGTTTCGTTCACTTCACA
CAGGTGTATGCCCTCAGCTGCTTCTGGTCTCAATTCTGTGCTAGCTGAATAGGTGTTCCA
TCCTCGGGTCATTCTTACTGGAGTTTCTGCAGCCCACAGGCTGCCTTGTCAACAGTACCA
CTTAACACCAGCATTCAGCGACCAGGCAGCCAAATGCCTGGTCTAGACAGAGATGATTTA
AACATGATCTTTGTTGCATGGTAGAAAGAGGGAACACATACTGGTTCTAGTTCTAAGGTT
CTTAGATGTTTGGTCCTCCTGGCATTAGTGAAATAGCTTTAAACTATTTCAAGGGAGAAG
CCTTGGCCACACCCACGACATTTGGCCGACAGTCCTTTCTCTCCATGAGCCTTGCCTTCC
CACCTGGCTGAAAGCTCACACTGAATCTTTCCTGTGTCCTTGGTGTCTTGGGAGAAAGGG
AACCCCGGTGTGGGCTTTACTGCCGGCATTGGCTTGGAGCCAGCGTGGAGCAGAGCCCAA
CAGGGTGGGCCAGGCTTAGTTATGGTGTGCCGGTTTAAGGAATGCCTGGTTTGCCTGGTT
GCCTGGGCTCCGAGCTAGAGTTTCCTAGTAGTTCTTTATGGCTGACCTAGTTGGGAAAGA
CTCCCATACTCAGCTTCAGGTAGAGGTGGTGAGAAACCTTTTCCTTTGTAGAGGCAGCAT
CATCCCAAGAGCCTACAGTGAGGTGAGGTGGGAGGGGCAGGCGCTGGGGAGGGTCTGCCA
AAGTGGGAGGGGGCAGGCCAGCTGGGGAGGGTCTGCCAAAGTGGGAGGGGGCAGGCCAGC
TGGGGAGGGTCTGCCAAAGTGGGAGGGGGCAGGCCAGCTGGGGAGGGTCTGCCAAAGTGG
GAGGGGGCAGGCCAGCTGGGGAGGGTCTGCCAAAGTGGGAGGGGGCAGGCCAGCTGGGGA
GGGTCTGCCAAAGTGGGAGGGGCAGGCGCTGGGGAGGGTCTGCCAAAGTGGGAGGGGGCA
GGCCAGCTGGGGAGGGTCTGCCAAAATGGGAGGGGGCAGGCCAGCTGGGGAGGGTCTGCC
AAAGTGGGAGGGACAGGCGCTGGGGAGGGTCTGCCAAAGTGGGAGGGGGCAGGCCAGCTG
GGGAGGGTCTGCCAAAGTGGGAGGGGGCAGGCCAGCTGGGGAGGGTCCTGGGGCTGGCGC
TGGGGAGGGTCTGCCAAAGGTCTCTCCAGCCTCTGCTGCTAGTGTAGTTGGGTGCCAGTT
CCAGGAAGTTTCTATGGCAACCTTAATGCGCCTTAAGGAACACTGTCAGGTTTGTGAACA
TATGCTCAGATGGAGATCTTGTTTCCAGGGAAAGGACTGGTACAGTGTGTAGCAAGCTGG
AATGGACAGAGAGACTTTGGCAAGAGATCATATCCGTTAAAAACAGGATACCTCAATGCT
ACATGTTTTTATCTTTGAGACAATATTTTTAAGGTTTTTACGCTCTGTCCCCTGTGAGCT
GATACCTAAGACCTAAGTCAGTGCTTTTTTAATGCCTTTTTGCCCTCTTGTTTGCTTTAA
AGTGAAATTTGTAACTGTTTGGAATAAATAATTTCTAAAGTTGCACCTGAGATGTTCTTC
TGCTTTGGGAACCTGGTCATTAAAAGGAAAACCTTCCTTCCATGATGAGCGAGGAGTAAA
GAATGAGGAAGGCTAACTAACTAATTAAATAGGACTGTCTCTGAGGACACAGCGGCTCAG
TCCTCTAACCCGGCTCGACACTAGGAAGGCAGAGGCGGGAGGATTTCTCCAAGTTTGAGG
CTAGTGAGGCCTTGTATGTCACTTATACTGCCCTCACAGACAGACAGACAGGCAGACACA
CACACACAGACACACACACACACACACACACACACTAAACCTGGGACTAGCAATTTCTCA
AAAGGTTTTAGTTAGTAAACATTCTCCCCAAACCAAGGCCTGGGATTTCTGGAAGGAAAT
CAGAGGCTCATGTGTCTGTCACGTTTGCATTGTTCAGCATTACCAGATAGAGGCATGTTA
GAAAAGTGAAGGAAGGCCCACTACTTAGGTGTGTACTGGACTATGGAGGTGAGAATGGGA
TCCTGAGAGCCATCCCGAGCTTTCTTGGTCATCAGATGGCTGAGTCTGTCCTCCACTGAA
AAAGATCTTGGGCAAGAAAAACTTGGGACCCAGCCTTCTCTATGTCCCAAACAGAAGGAA
ACCCATCATGTGGATGCTTTGCAGGTAAGAGTAGGGGTGGCTGCTGAGGGCCAGCCTCAG
CTTGGTTTGGGTTCTGAGAGAAGGGGTGTCTGGGAGCAGTACAAACAAACAACTTGAAGT
CTAATCGTGGGTCCAAGCTGGCTCTGTGGTTGAGACAGCTAGTTTTCTGCTAGCTGAGAG
AGACCATTCTCTCTGCTAGTAAACATGCTTCCTACAAGCTCTCTGGATAGCTCGTGGGTT
TTCTGACCAAAGTCAGAAAAGCTGCTATATATATATAAAAAAAAAATTCTTGGATATTCT
AACCAAATCAGAAACCCTGTTTGAAAATTTCTAAAATTAATTCTTGGATTTTCCAATCAA
AATCAGAAAGAAAAAAAAAAATCTCAAAGAGCCGTGCGCGCTCTTCAGACAACCTTCTCT
GAATAGCTGCTGAAAAACATTGTAAAGGAGCGACGTCGGCTCTCTAAGTAACTCTTAGTG
GTCAGAAATCCCATTAGAAAAAAATTCTAAAAAGCTGAGTTTGCTCTCCATGACTTTCCA
GACTAAAATCAGGAATCCTGTTAGAAAAAAAAAACCTAGAAGAGCTATGTTCCCTCTCCA
GAGATCTTCAGACAGCTCAGCTCTCCTTGGTAGAGAAAAATTCTAAGAACCATTATTGCT
TTTTGCCAGCTCATCTCATGCAGCCCAAAAGCCTAGCTTTTTATTTACATATCAATTCAG
TCATTTATTCCAGGTTCCCTCTTGACCACCCCGGGGAATCCACACTCCAGGACCTTAGCC
CCTTGACTCACAGGAAAGGGATAGCAAGTCCATTTTTCCCCCTCTTTTATTAACATTGCA
GAAGAATTCAGAGATCTGCCTGCCTCTGTAAACATAGCTGGGTGGGACCTTGTCCTGAGA
GTACCATCTCCCACCACTCCTAGACCTAAATTTGCTTTGACCCAGGCTGACCTTGAACTC
AAGAATCTGCCTGCATTTGTATCTGCCTGTCTTTGCGTCTCTCTGGCAAGCCGGCTCACA
GTGCAGCCGCCTCTGCTCCTTCACATCTGTGAAGCTCCTTATACAATTCATACTGCATTT
TATATTTTTGCATAGCTGAGAAATTATACATTTCTGAACATGTCTTTAGAGTTCTTGTCC
TGAAGATCCCAGTGTTTAGCATTTTGCTGAGACATTAGTCACACCTTCCTATCCTGGACT
CACGGTATCTCTGATTATCATGAAATCATTAATGTTAACAGGGAGGACATTCCTTGGAGG
AACATGAAAATATGTTCATTATTATACAAACAAGCCTTACTCCCACAGCAGCCGTCAACT
CTCGTGGAGGCCCACGCCTGCTGGCCCTGTTCGAGGGGCAGGAACCATGTCCTTCTGTCT
CTACCAAGGCCATGCCACAGCTGGTGGCAAGAAGTGTGCAAAGGCCCCCGACTCAGATGA
AGCTGGGGTTGGGTAGCGCCCACTACCCTTCACTTGGACCCCTGTTCCCGAAGCACAGCT
GTTCTTCTCCACCCCAAGGCAGGTGCTGTTTCCTTAGTATGAGCTCTGGCCCCATAGCTG
TTGGTGACCTTGATGCCCCTTTCTGCAGCCGTGTGCTCTCCAACCCTGAACCACTCTCTC
CAGCAAGGATCCCTGTGTCCTCATTTGGTTTGCTAAACTGAGGCTGGCAGCGGGCCAACT
GGGAGTCTGATCCCCCGGGCAAAGGCATGGCACTTTCAGGGGTGACTTTGAAGAGGTCTG
AGCACCAGGGGAGGTCACAGAGAGGAAGGACAGAAATCGGTTCCTTAAATTTTTCTCCCC
TTTGGTTTTTCTGAGACAGGGTTTCTCTGTGTGGCCCTGGCTATCCTAGAACCTGCTCTG
TAGATCACAGCTGGCCTTGAACTCAGAGATCTGTCTGCCTCTGCCTCCAGAGTGCTGGGA
CTAAAGGTGTGCGCCACCACAGCTCCGGCTAGATCCTTAAACTGAACCAGGGGCTTCCCT
TTCACCTCTGGACTTGCCGTGAGACTTTGATGCTTAGTTTGTATACACTTTAATGGACCT
TTGAAAACGCCTCCCATTCTGTCCGGGATCGCAGGGCTCTGTCACATGGAGTACAGGAGG
GCAAACAACCCTAAGAGCCCAACCTGAGAGTCTGAGTTGGATCTTACAGAGGCAGCAGAA
GACAAAGTTTTGATTCTGGAAATTTCTAACTATTTCCCTTAAGTTCCATTCCCAGCTCTG
CTGGCCTCTTTGGGGGGACCTGCACACATGTGACAGGCACAGACACATAAAATAAAATAA
AATAAAATAAAATAAAATAAAATAAATAAAATAACATGTGTTAAAATCTTGGACTGGAAA
GATGGTTCAGTGGTTAAGAGCACTGGCTGCTCTTACAGAAGGTTAAAGTCAATGGAAAAC
CCAGAAATCTCGGAAATGTTCATGCGGAGCGCTTGGAATAAAATCACAGCCATTTCTGAG
AAATATCTCTGTTACTTAAAGTACCTTACTGAGAAGGTCTTACTTAAGGGGAAGAGTCTC
CACCACTGGCTTCCTGTGGGTGTGTCTCACGGGGGATTTGTTCCTTTAGATCTCCAGAGA
TGAAAGGAGACCGAGGGCCCCTTAGGAGACTTTTGTTTTATTTTTTTCTTGACAGAGTCT
TGCTATGTAGCCCAGGCTGGCCTGCAGTTCACAGTTCTTGCCTCTCAGCCTGACCCTTGT
GGGAGTTACACCCAGCCAGTTTTAAGAAAAACAAGTTCTTGGTTTTAGGGGCTGGCCTTC
TCAACTCTAGCCCACTTGTGTTCTCAGGACTCCCCTATTCCCCTTGAAATAAACGATCAC
TATTTCCA
3' upstream sequence
TTTCTAGCCAAGTGTCCTTGATGCAATCTTCTGGCCTAGGACAACAGCCTGGACCCAGAT
GCCCTCTGAACTCTGACTTGAAGCCTGGAGTTAATCATGGTTCTTTATTTTCTCATCTCT
TTTTTGGATTCTAGTTAAAGCCTAAATATAGTTCTGAGACACTTTGGGTTTTCTTACTGG
TTCTTGACCGTCAAGCCAAACTCAAAGGGCAGGACTTCCTCCTTCTGGCAGCTGACGGGA
TCTCTACTTTCCTGCTTGTTTTTGTTGAGTCAGAGCCCTGGCTGTCCTGGATCTCACTAT
GTAGACCAGGCGGCTGTTCATGAATTCAGGGAGATCCACCTGTCTCTGCTTCCCAACTGC
TGGATTAAAGGTGTATGCTACCACAGCCAGCCTTGCTCCACTGTCTGTCTGTCTCTTTCA
TTCTTTCTTCCATTTTTTTTTTAAGATCTATTGATGTATGTTATGTATATGGGTGCTTTG
ACTGCAGATGTGTCTGTACATCAGAAGTGGGCATCAGATCACATTGAAGATGGTTGTGAG
CTGCCTCAGGCTGCTGGTAGTGAAAGTATAACAACGTAAAAACAGAATTCTAGGCCTTTA
GGCCCAGGCTTGGGAATGTGGCCTTTGTAAAGGTAATCATAAAAGAAATAGCAACATTCC
TCCATCCACCCGCTTCCTGGGTTCAAAGAGTGCTCATTCAAAGAAAGTCACCCAGAACCT
GCAATGCAAATGTGCTATTGTTGGGGGCTCTTAGAAGCTGTCTTGAGAGTTAACAATTAC
CAGGTATTCCTTGTGACTCTTGTAACTTTACACTTCCTTGTGACTCTTAACTGGTATCTT
TGGTATCTTCCAACAACGCCCTCCCCACTTCCTTAAGTTGTGGTTTCTTCCTTTAAATAC
CCCCTTACCCAGCTACTCGGGGTGCCACGGTCCTCTACCCCTGCGTGGTGTATGACCATG
GGCCCGAGAGCACTCTTGAATAAAAAATCCTCTTGCAATT..........

Sequence Detail Report

Gene Symbol (Gene ID) Il6ra (ENSMUSG00000027947)
Transcript ID ENSMUST00000197679
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 460 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information