VariantTable
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name
Arfgef1 (ENSMUSG00000067851)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Arfgef1
note
: ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) [Source:MGI Symbol;Acc:MGI:2442988]
name
Arfgef1 (ENSMUSG00000067851)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000088615
name
Arfgef1 (ENSMUSG00000067851)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35512.1
Uniprot/SWISSPROT:
G3X9K3
RefSeq_peptide:
NP_001095900
RefSeq_mRNA:
NM_001102430.1
Vega_transcript:
Arfgef1-002
Vega_transcript:
OTTMUST00000085577
UCSC:uc007ahn.1
Fantom:
D130059B05
EMBL:
AC102462
EMBL:
AC159972
EMBL:
AK051592
EMBL:
CH466536
GO:
GO:0000139
GO:
GO:0000139
GO:
GO:0005085
GO:
GO:0005085
GO:
GO:0005086
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005730
GO:
GO:0005730
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0005794
GO:
GO:0005794
GO:
GO:0005802
GO:
GO:0005829
GO:
GO:0005829
GO:
GO:0007030
GO:
GO:0007030
GO:
GO:0010256
GO:
GO:0010256
GO:
GO:0015031
GO:
GO:0016192
GO:
GO:0016363
GO:
GO:0017022
GO:
GO:0017022
GO:
GO:0030532
GO:
GO:0030532
GO:
GO:0030837
GO:
GO:0030837
GO:
GO:0031175
GO:
GO:0032012
GO:
GO:0034237
GO:
GO:0034237
GO:
GO:0034260
GO:
GO:0034260
GO:
GO:0043547
GO:
GO:0048471
GO:
GO:0048471
GO:
GO:0051897
GO:
GO:0090284
GO:
GO:0090284
GO:
GO:0090303
GO:
GO:0090303
GO:
GO:2000114
GO:
GO:2000114
MGI_trans_name:
Arfgef1-002
Vega_translation:
178704
Vega_translation:
OTTMUSP00000046250
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005730
goslim_goa:
GO:0005737
goslim_goa:
GO:0005794
goslim_goa:
GO:0005829
goslim_goa:
GO:0006810
goslim_goa:
GO:0008092
goslim_goa:
GO:0008150
goslim_goa:
GO:0016192
goslim_goa:
GO:0043226
protein_id:
BAC34685.1
protein_id:
EDL14306.1
OTTP:
OTTMUSP00000046250
OTTT:
OTTMUST00000085577
UniParc:
UPI00000216BD
definition
note
: transcript_id=ENSMUST00000088615
protein_id
: ENSMUSP00000085986
translation
: MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKVETEKQSPPHGEAKAGSGTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGRAPDSTTPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYNIYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMERERHRQQQHLLQSPVSHHEPESPHLRYLPPQTVDHINQEHEGDLEPQTHDVDKSLQDDTEPENGSDISSAENEQTEADQATAAETLSKNDILYDGDYEEKPLDIVQSIVEEMVNIIVGDMGEGMAISASTEGNTGTVEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQEISEVKHPETINRYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSTKQNVASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFEKHFPATIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMSVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPTSGEAEPPSPSAVSEKPLDAISQKSVDIHDSIQPRSSDNRQQAPLVSVSTVSEEVSKVKSTAKFPEQKLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESRVSAWEEVQQRLLNVCREALSYFLTLTSESHREAWTNLLLLFLTKVLKISDSRFKAHASFYYPLLCEIMQFDLIPELRAVLRRFFLRIGIVFQISQPPEQELGINRQ
name
type
misc_feature
link
xref
definition
note
: contig AC102462.19 1..140984(-1)
name
Arfgef1 (ENSMUSG00000067851)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000085578
Vega_transcript:
OTTMUST00000085578
MGI_trans_name:
Arfgef1-003
OTTT:
OTTMUST00000085578
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000156563
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.