VariantTable
SequenceCutter
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Updated genome
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On read coverage region : Click to browse alignment view.
name
Sulf1 (ENSMUSG00000016918)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Sulf1
note
: sulfatase 1 [Source:MGI Symbol;Acc:MGI:2138563]
name
Sulf1 (ENSMUSG00000016918)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000177608
name
Sulf1 (ENSMUSG00000016918)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000180062
name
Sulf1 (ENSMUSG00000016918)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000186051
name
Sulf1 (ENSMUSG00000016918)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000088585
name
Sulf1 (ENSMUSG00000016918)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14820.1
Uniprot/SWISSPROT:
Q8K007
RefSeq_peptide:
NP_001185494
RefSeq_mRNA:
NM_001198565.1
Vega_transcript:
OTTMUST00000123376
Vega_transcript:
Sulf1-001
UCSC:uc007aia.2
Fantom:
3230401B12
Fantom:
B130018L10
EMBL:
AK028285
EMBL:
AK045002
EMBL:
AK129278
EMBL:
AY101178
EMBL:
BC034547
EMBL:
BC049276
GO:
GO:0001502
GO:
GO:0001822
GO:
GO:0001937
GO:
GO:0001937
GO:
GO:0002063
GO:
GO:0003094
GO:
GO:0004065
GO:
GO:0004065
GO:
GO:0005509
GO:
GO:0005615
GO:
GO:0005783
GO:
GO:0005794
GO:
GO:0005795
GO:
GO:0005886
GO:
GO:0006790
GO:
GO:0006915
GO:
GO:0007155
GO:
GO:0008449
GO:
GO:0008449
GO:
GO:0009986
GO:
GO:0010575
GO:
GO:0014846
GO:
GO:0016525
GO:
GO:0016525
GO:
GO:0030177
GO:
GO:0030177
GO:
GO:0030201
GO:
GO:0030336
GO:
GO:0030336
GO:
GO:0030513
GO:
GO:0030513
GO:
GO:0032836
GO:
GO:0035860
GO:
GO:0036022
GO:
GO:0040036
GO:
GO:0040036
GO:
GO:0040037
GO:
GO:0045121
GO:
GO:0045121
GO:
GO:0048010
GO:
GO:0048010
GO:
GO:0048661
GO:
GO:0048706
GO:
GO:0051216
GO:
GO:0060348
GO:
GO:0060384
GO:
GO:0060686
MGI_trans_name:
Sulf1-001
Vega_translation:
178719
Vega_translation:
OTTMUSP00000067394
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005615
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005783
goslim_goa:
GO:0005794
goslim_goa:
GO:0005886
goslim_goa:
GO:0006790
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0008219
goslim_goa:
GO:0009790
goslim_goa:
GO:0030154
goslim_goa:
GO:0030198
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
goslim_goa:
GO:0048856
protein_id:
AAH34547.1
protein_id:
AAH49276.1
protein_id:
AAM76863.1
protein_id:
BAC25858.1
protein_id:
BAC32179.1
protein_id:
BAC98088.1
OTTP:
OTTMUSP00000067394
OTTT:
OTTMUST00000123376
UniParc:
UPI0000027F92
definition
note
: transcript_id=ENSMUST00000177608
protein_id
: ENSMUSP00000137523
translation
: MKYSLWALLLAVLGTQLLGSLCSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIMEQGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQRKRLQTLMSVDDSVERLYNMLVESGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIEPGSIVPQIVLNIDLAPTILDIAGLDSPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLRKKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNARNLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQFLRNKGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQVLPPRSIAKRHDEGHQGFIGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERELYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECGCGDQSYYNKEKGVKRQEKLKSHLHPFKEAAAQEVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQCNPRPKSLDIGAKEGGNYDPHRGQLWDGWEG
name
Sulf1 (ENSMUSG00000016918)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14820.1
Uniprot/SWISSPROT:
Q8K007
RefSeq_peptide:
NP_001185495
RefSeq_mRNA:
NM_001198566.1
Vega_transcript:
OTTMUST00000123377
Vega_transcript:
Sulf1-002
UCSC:uc007aib.2
Fantom:
3230401B12
Fantom:
B130018L10
EMBL:
AK028285
EMBL:
AK045002
EMBL:
AK129278
EMBL:
AY101178
EMBL:
BC034547
EMBL:
BC049276
GO:
GO:0001502
GO:
GO:0001822
GO:
GO:0001937
GO:
GO:0002063
GO:
GO:0003094
GO:
GO:0004065
GO:
GO:0005509
GO:
GO:0005615
GO:
GO:0005783
GO:
GO:0005794
GO:
GO:0005795
GO:
GO:0005886
GO:
GO:0006790
GO:
GO:0006915
GO:
GO:0007155
GO:
GO:0008449
GO:
GO:0009986
GO:
GO:0010575
GO:
GO:0014846
GO:
GO:0016525
GO:
GO:0030177
GO:
GO:0030201
GO:
GO:0030336
GO:
GO:0030513
GO:
GO:0032836
GO:
GO:0035860
GO:
GO:0036022
GO:
GO:0040036
GO:
GO:0040037
GO:
GO:0045121
GO:
GO:0048010
GO:
GO:0048661
GO:
GO:0048706
GO:
GO:0051216
GO:
GO:0060348
GO:
GO:0060384
GO:
GO:0060686
MGI_trans_name:
Sulf1-002
Vega_translation:
178720
Vega_translation:
OTTMUSP00000067395
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005615
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005783
goslim_goa:
GO:0005794
goslim_goa:
GO:0005886
goslim_goa:
GO:0006790
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0008219
goslim_goa:
GO:0009790
goslim_goa:
GO:0030154
goslim_goa:
GO:0030198
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
goslim_goa:
GO:0048856
protein_id:
AAH34547.1
protein_id:
AAH49276.1
protein_id:
AAM76863.1
protein_id:
BAC25858.1
protein_id:
BAC32179.1
protein_id:
BAC98088.1
OTTP:
OTTMUSP00000067395
OTTT:
OTTMUST00000123377
UniParc:
UPI0000027F92
definition
note
: transcript_id=ENSMUST00000180062
protein_id
: ENSMUSP00000136014
translation
: MKYSLWALLLAVLGTQLLGSLCSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIMEQGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQRKRLQTLMSVDDSVERLYNMLVESGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIEPGSIVPQIVLNIDLAPTILDIAGLDSPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLRKKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNARNLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQFLRNKGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQVLPPRSIAKRHDEGHQGFIGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERELYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECGCGDQSYYNKEKGVKRQEKLKSHLHPFKEAAAQEVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQCNPRPKSLDIGAKEGGNYDPHRGQLWDGWEG
name
Sulf1 (ENSMUSG00000016918)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000123378
Vega_transcript:
Sulf1-008
UCSC:uc007aia.2
MGI_trans_name:
Sulf1-008
Vega_translation:
178721
Vega_translation:
OTTMUSP00000067396
OTTP:
OTTMUSP00000067396
OTTT:
OTTMUST00000123378
UniParc:
UPI00000EB44B
definition
note
: transcript_id=ENSMUST00000186051
protein_id
: ENSMUSP00000141153
translation
: MKYSLWALLLAVLGTQLLGSLCSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIMEQGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQRKRLQTLMSVDDSVERLYNMLVESGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIEPGSIVPQIVLNIDLAPTILDIAGLDSPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLRKKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNARNLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQFLRNKGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQVLPPRSIAKRHDEGHQGFIGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERELYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECGCGDQSYYNKEKGVKRQEKLKSHLHPFKEAAAQEVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQCNPRPKSLDIGAKEGGNYDPHRA
name
Sulf1 (ENSMUSG00000016918)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14820.1
Uniprot/SWISSPROT:
Q8K007
RefSeq_peptide:
NP_758498
RefSeq_mRNA:
NM_172294.1
Vega_transcript:
OTTMUST00000123380
Vega_transcript:
Sulf1-004
UCSC:uc007aid.1
Fantom:
3230401B12
Fantom:
B130018L10
EMBL:
AK028285
EMBL:
AK045002
EMBL:
AK129278
EMBL:
AY101178
EMBL:
BC034547
EMBL:
BC049276
GO:
GO:0001502
GO:
GO:0001822
GO:
GO:0001937
GO:
GO:0002063
GO:
GO:0003094
GO:
GO:0004065
GO:
GO:0005509
GO:
GO:0005615
GO:
GO:0005783
GO:
GO:0005794
GO:
GO:0005795
GO:
GO:0005886
GO:
GO:0006790
GO:
GO:0006915
GO:
GO:0007155
GO:
GO:0008449
GO:
GO:0009986
GO:
GO:0010575
GO:
GO:0014846
GO:
GO:0016525
GO:
GO:0030177
GO:
GO:0030201
GO:
GO:0030336
GO:
GO:0030513
GO:
GO:0032836
GO:
GO:0035860
GO:
GO:0036022
GO:
GO:0040036
GO:
GO:0040037
GO:
GO:0045121
GO:
GO:0048010
GO:
GO:0048661
GO:
GO:0048706
GO:
GO:0051216
GO:
GO:0060348
GO:
GO:0060384
GO:
GO:0060686
MGI_trans_name:
Sulf1-004
Vega_translation:
178722
Vega_translation:
OTTMUSP00000067397
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005615
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005783
goslim_goa:
GO:0005794
goslim_goa:
GO:0005886
goslim_goa:
GO:0006790
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0008219
goslim_goa:
GO:0009790
goslim_goa:
GO:0030154
goslim_goa:
GO:0030198
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
goslim_goa:
GO:0048856
protein_id:
AAH34547.1
protein_id:
AAH49276.1
protein_id:
AAM76863.1
protein_id:
BAC25858.1
protein_id:
BAC32179.1
protein_id:
BAC98088.1
OTTP:
OTTMUSP00000067397
OTTT:
OTTMUST00000123380
UniParc:
UPI0000027F92
definition
note
: transcript_id=ENSMUST00000088585
protein_id
: ENSMUSP00000085949
translation
: MKYSLWALLLAVLGTQLLGSLCSTVRSQRFRGRIQQERKNIRPNIILVLTDDQDVELGSLQVMNKTRKIMEQGGATFTNAFVTTPMCCPSRSSMLTGKYVHNHNVYTNNENCSSPSWQAMHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPGWREWLGLIKNSRFYNYTVCRNGIKEKHGFDYAKDYFTDLITNESINYFKMSKRMYPHRPIMMVISHAAPHGPEDSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHMEFTNVLQRKRLQTLMSVDDSVERLYNMLVESGELDNTYIIYTADHGYHIGQFGLVKGKSMPYDFDIRVPFFIRGPSIEPGSIVPQIVLNIDLAPTILDIAGLDSPSDVDGKSVLKLLDLEKPGNRFRTNKKAKIWRDTFLVERGKFLRKKEESGKNIQQSNHLPKYERVKELCQQARYQTACEQPGQNWQCIEDTSGKLRIHKCKGPSDLLTVRQNARNLYSRGLHDKDKECHCRDSGYRSSRSQRKNQRQFLRNKGTPKYKPRFVHTRQTRSLSVEFEGEIYDINLEEEELQVLPPRSIAKRHDEGHQGFIGHQAAAGDIRNEMLADSNNAVGLPATVRVTHKCFILPNDTIHCERELYQSARAWKDHKAYIDKEIEVLQDKIKNLREVRGHLKKRKPEECGCGDQSYYNKEKGVKRQEKLKSHLHPFKEAAAQEVDSKLQLFKEHRRRKKERKEKKRQRKGEECSLPGLTCFTHDNNHWQTAPFWNLGSFCACTSSNNNTYWCLRTVNETHNFLFCEFATGFLEYFDMNTDPYQLTNTVHTVERSILNQLHIQLMELRSCQGYKQCNPRPKSLDIGAKEGGNYDPHRGQLWDGWEG
name
type
misc_feature
link
xref
definition
note
: contig AC126044.4 87008..213412(1)
name
Sulf1 (ENSMUSG00000016918)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000123384
Vega_transcript:
OTTMUST00000123384
MGI_trans_name:
Sulf1-010
OTTT:
OTTMUST00000123384
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000189447
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.