VariantTable
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name
Abcc1 (ENSMUSG00000023088)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Abcc1
note
: ATP-binding cassette, sub-family C (CFTR/MRP), member 1 [Source:MGI Symbol;Acc:MGI:102676]
name
Abcc1 (ENSMUSG00000023088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000133454
name
Abcc1 (ENSMUSG00000023088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000147759
name
Abcc1 (ENSMUSG00000023088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000130671
name
Abcc1 (ENSMUSG00000023088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000100167
name
Abcc1 (ENSMUSG00000023088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000154748
name
Abcc1 (ENSMUSG00000023088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000134776
name
Abcc1 (ENSMUSG00000023088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000144676
name
Abcc1 (ENSMUSG00000023088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Abcc1-003
Vega_transcript:
OTTMUST00000066860
Uniprot/SPTREMBL:
E9Q1I5
UCSC:uc007yhj.2
EMBL:
AC154265
GO:
GO:0005524
GO:
GO:0005886
GO:
GO:0005887
GO:
GO:0016020
GO:
GO:0016323
GO:
GO:0016887
GO:
GO:0042626
GO:
GO:0055085
GO:
GO:0070062
MGI_trans_name:
Abcc1-003
Vega_translation:
218127
Vega_translation:
OTTMUSP00000033566
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022857
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0055085
OTTP:
OTTMUSP00000033566
OTTT:
OTTMUST00000066860
UniParc:
UPI0001611598
definition
note
: transcript_id=ENSMUST00000133454
protein_id
: ENSMUSP00000122656
translation
: MALRSFCSADGSDPLWDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFFYLSRHDRGYIQMTHLNKTKTALGFFLWIICWADLFYSFWERSQGVLRAPVLLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALLCALAILRSKIISALKKDAHVDVFRDSTFYLYFTLVLVQLVLSCFSDCSPLFSETVHDRNPCPESSASFLSRITFWWITGMMVHGYRQPLESSDLWSLNKEDTSEEVVPVLVNNWKKECDKSRKQPVRIVYAPPKDPSKPKGSSQLDVNEEVEALIVKSPHKDREPSLFKVLYKTFGPYFLMSFLYKALHDLMMFAGPKILELIINFVNDREAPDWQGYFYTALLFVSACLQTLALHQYFHICFVSGMRIKTAVVGAVYRKALLITNAARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLSLGPSVLAGVAVMILMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFQDKVMSIRQEELKVLKKSAYLAAVGTFTWVCTPFLVALSTFAVFVTVDERNILDAKKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRSIKSGGRRE
name
Abcc1 (ENSMUSG00000023088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Abcc1-004
Vega_transcript:
OTTMUST00000066861
Uniprot/SPTREMBL:
E9Q1I5
UCSC:uc007yhj.2
EMBL:
AC154265
GO:
GO:0005524
GO:
GO:0005886
GO:
GO:0005887
GO:
GO:0016020
GO:
GO:0016323
GO:
GO:0016887
GO:
GO:0042626
GO:
GO:0055085
GO:
GO:0070062
MGI_trans_name:
Abcc1-004
Vega_translation:
218128
Vega_translation:
OTTMUSP00000033567
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022857
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0055085
OTTP:
OTTMUSP00000033567
OTTT:
OTTMUST00000066861
UniParc:
UPI0001611598
definition
note
: transcript_id=ENSMUST00000147759
protein_id
: ENSMUSP00000115627
translation
: MALRSFCSADGSDPLWDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFFYLSRHDRGYIQMTHLNKTKTALGFFLWIICWADLFYSFWERSQGVLRAPVLLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALLCALAILRSKIISALKKDAHVDVFRDSTFYLYFTLVLVQLVLSCFSDCSPLFSETVHDRNPCPESSASFLSRITFWWITGMMVHGYRQPLESSDLWSLNKEDTSEEVVPVLVNNWKKECDKSRKQPVRIVYAPPKDPSKPKGSSQLDVNEEVEALIVKSPHKDREPSLFKVLYKTFGPYFLMSFLYKALHDLMMFAGPKILELIINFVNDREAPDWQGYFYTALLFVSACLQTLALHQYFHICFVSGMRIKTAVVGAVYRKALLITNAARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLSLGPSVLAGVAVMILMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFQDKVMSIRQEELKVLKKSAYLAAVGTFTWVCTPFLVALSTFAVFVTVDERNILDAKKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRSIKSGGRRE
name
Abcc1 (ENSMUSG00000023088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Abcc1-010
Vega_transcript:
OTTMUST00000066867
Uniprot/SPTREMBL:
E9Q1I5
UCSC:uc007yhj.2
EMBL:
AC154265
GO:
GO:0005524
GO:
GO:0005886
GO:
GO:0005887
GO:
GO:0016020
GO:
GO:0016323
GO:
GO:0016887
GO:
GO:0042626
GO:
GO:0055085
GO:
GO:0070062
MGI_trans_name:
Abcc1-010
Vega_translation:
218131
Vega_translation:
OTTMUSP00000033570
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022857
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0055085
OTTP:
OTTMUSP00000033570
OTTT:
OTTMUST00000066867
UniParc:
UPI0001611598
definition
note
: transcript_id=ENSMUST00000130671
protein_id
: ENSMUSP00000116714
translation
: MALRSFCSADGSDPLWDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFFYLSRHDRGYIQMTHLNKTKTALGFFLWIICWADLFYSFWERSQGVLRAPVLLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALLCALAILRSKIISALKKDAHVDVFRDSTFYLYFTLVLVQLVLSCFSDCSPLFSETVHDRNPCPESSASFLSRITFWWITGMMVHGYRQPLESSDLWSLNKEDTSEEVVPVLVNNWKKECDKSRKQPVRIVYAPPKDPSKPKGSSQLDVNEEVEALIVKSPHKDREPSLFKVLYKTFGPYFLMSFLYKALHDLMMFAGPKILELIINFVNDREAPDWQGYFYTALLFVSACLQTLALHQYFHICFVSGMRIKTAVVGAVYRKALLITNAARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLSLGPSVLAGVAVMILMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFQDKVMSIRQEELKVLKKSAYLAAVGTFTWVCTPFLVALSTFAVFVTVDERNILDAKKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRSIKSGGRRE
name
Abcc1 (ENSMUSG00000023088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS37264.1
Uniprot/SWISSPROT:
O35379
RefSeq_peptide:
NP_032602
RefSeq_mRNA:
NM_008576.3
RefSeq_peptide_predicted:
XP_006521902.2
Vega_transcript:
Abcc1-001
Vega_transcript:
OTTMUST00000066858
Uniprot/SPTREMBL:
A5D6P3
UCSC:uc007yhj.2
Fantom:
4931419N09
ChEMBL:CHEMBL2532
EMBL:
AF022908
EMBL:
AK029876
EMBL:
BC090617
EMBL:
CH466521
GO:
GO:0005524
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0005887
GO:
GO:0008152
GO:
GO:0016020
GO:
GO:0016020
GO:
GO:0016323
GO:
GO:0016323
GO:
GO:0016887
GO:
GO:0042626
GO:
GO:0055085
GO:
GO:0070062
GO:
GO:0070062
MGI_trans_name:
Abcc1-001
Vega_translation:
218126
Vega_translation:
OTTMUSP00000033565
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022857
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0055085
protein_id:
AAB80938.1
protein_id:
AAH90617.1
protein_id:
BAC26654.1
protein_id:
EDK97393.1
OTTP:
OTTMUSP00000033565
OTTT:
OTTMUST00000066858
Reactome:
R-MMU-1430728
Reactome:
R-MMU-196741
Reactome:
R-MMU-196849
Reactome:
R-MMU-196854
Reactome:
R-MMU-2142691
Reactome:
R-MMU-2142753
Reactome:
R-MMU-382551
Reactome:
R-MMU-382556
Reactome:
R-MMU-556833
UniParc:
UPI0000029637
definition
note
: transcript_id=ENSMUST00000100167
protein_id
: ENSMUSP00000097743
translation
: MALRSFCSADGSDPLWDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFFYLSRHDRGYIQMTHLNKTKTALGFFLWIICWADLFYSFWERSQGVLRAPVLLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALLCALAILRSKIISALKKDAHVDVFRDSTFYLYFTLVLVQLVLSCFSDCSPLFSETVHDRNPCPESSASFLSRITFWWITGMMVHGYRQPLESSDLWSLNKEDTSEEVVPVLVNNWKKECDKSRKQPVRIVYAPPKDPSKPKGSSQLDVNEEVEALIVKSPHKDREPSLFKVLYKTFGPYFLMSFLYKALHDLMMFAGPKILELIINFVNDREAPDWQGYFYTALLFVSACLQTLALHQYFHICFVSGMRIKTAVVGAVYRKALLITNAARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLSLGPSVLAGVAVMILMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFQDKVMSIRQEELKVLKKSAYLAAVGTFTWVCTPFLVALSTFAVFVTVDERNILDAKKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRSIKSGEGNSITVKNATFTWARGEPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVTLKGSVAYVPQQAWIQNDSLRENILFGHPLQENYYKAVMEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNSDIYLFDDPLSAVDAHVGKHIFEKVVGPMGLLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLDRDGAFAEFLRTYANAEQDLASEDDSVSGSGKESKPVENGMLVTDTVGKHLQRHLSNSSSHSGDTSQQHSSIAELQKAGAKEETWKLMEADKAQTGQVQLSVYWNYMKAIGLFITFLSIFLFLCNHVSALASNYWLSLWTDDPPVVNGTQANRNFRLSVYGALGILQGAAIFGYSMAVSIGGIFASRRLHLDLLYNVLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPQVIKMFMGSLFSVIGAVIIILLATPIAAVIIPPLGLVYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAVISRHSLSAGLVGLSVSYSLQITAYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSTWPHSGRVEFRDYCLRYREDLDLVLKHINVTIEGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGVNIAKIGLHNLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVRECGAPSELLQQRGIFYSMAKDAGLV
name
Abcc1 (ENSMUSG00000023088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Abcc1-008
Vega_transcript:
OTTMUST00000066865
Uniprot/SPTREMBL:
D3YYJ6
EMBL:
AC154265
GO:
GO:0005524
GO:
GO:0005886
GO:
GO:0005887
GO:
GO:0016020
GO:
GO:0016323
GO:
GO:0016887
GO:
GO:0042626
GO:
GO:0055085
GO:
GO:0070062
MGI_trans_name:
Abcc1-008
Vega_translation:
218130
Vega_translation:
OTTMUSP00000033569
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022857
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0055085
OTTP:
OTTMUSP00000033569
OTTT:
OTTMUST00000066865
UniParc:
UPI000161159B
definition
note
: transcript_id=ENSMUST00000154748
protein_id
: ENSMUSP00000115763
translation
: MALRSFCSADGSDPLWDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFFYLSRHDRGYIQMTHLNKTKTGRGIGLLDKVLHNALGFFLWIICWADLFYSFWERSQGVLRAPVLLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALLCALAILRSKIISALKKDAHVDVFRDSTFYLYFTL
name
Abcc1 (ENSMUSG00000023088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Abcc1-011
Vega_transcript:
OTTMUST00000066868
Uniprot/SPTREMBL:
D3YZY1
EMBL:
AC154265
GO:
GO:0005524
GO:
GO:0005886
GO:
GO:0005887
GO:
GO:0016020
GO:
GO:0016323
GO:
GO:0016887
GO:
GO:0042626
GO:
GO:0055085
GO:
GO:0070062
MGI_trans_name:
Abcc1-011
Vega_translation:
218132
Vega_translation:
OTTMUSP00000033571
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022857
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0055085
OTTP:
OTTMUSP00000033571
OTTT:
OTTMUST00000066868
UniParc:
UPI000161159A
definition
note
: transcript_id=ENSMUST00000134776
protein_id
: ENSMUSP00000120933
translation
: MALRSFCSADGSDPLWDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFFYLSRHDRGYIQMTHLNKTKTALGFFLWIICWADLFYSFWERSQGVLRAPVLLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALLCALAILRSKIISALKKNPCPESSASFLSRITFWWITGMMVHGYRQPLESSDL
name
Abcc1 (ENSMUSG00000023088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Abcc1-007
Vega_transcript:
OTTMUST00000066864
Uniprot/SPTREMBL:
D3Z407
EMBL:
AC154265
GO:
GO:0005524
GO:
GO:0005886
GO:
GO:0005887
GO:
GO:0016020
GO:
GO:0016323
GO:
GO:0016887
GO:
GO:0042626
GO:
GO:0055085
GO:
GO:0070062
MGI_trans_name:
Abcc1-007
Vega_translation:
218129
Vega_translation:
OTTMUSP00000033568
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0022857
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0055085
OTTP:
OTTMUSP00000033568
OTTT:
OTTMUST00000066864
UniParc:
UPI0001611599
definition
note
: transcript_id=ENSMUST00000144676
protein_id
: ENSMUSP00000116726
translation
: MVDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFFYLSRHDRGYIQMTHLNKTKTALGFFLWIICWADLFYSFWERSQGVLRAPVLLVSPTLLGITM
name
type
misc_feature
link
xref
definition
note
: contig AC154265.2 1..187165(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.