VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Amn1 (ENSMUSG00000068250)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Amn1
note
: antagonist of mitotic exit network 1 [Source:MGI Symbol;Acc:MGI:2442933]
name
Amn1 (ENSMUSG00000068250)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000111535
name
Amn1 (ENSMUSG00000068250)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000095319
name
Amn1 (ENSMUSG00000068250)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000141346
name
Amn1 (ENSMUSG00000068250)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS51961.1
RefSeq_peptide:
NP_001106895
RefSeq_mRNA:
NM_001113424.1
RefSeq_peptide_predicted:
XP_006507108.1
RefSeq_peptide_predicted:
XP_006536139.1
Vega_transcript:
Amn1-002
Vega_transcript:
OTTMUST00000059719
Uniprot/SPTREMBL:
B8JKV0
UCSC:uc012evz.1
EMBL:
AC128664
EMBL:
AC132412
GO:
GO:0003674
GO:
GO:0005575
GO:
GO:0008150
MGI_trans_name:
Amn1-002
Vega_translation:
199682
Vega_translation:
OTTMUSP00000029070
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0008150
OTTP:
OTTMUSP00000029070
OTTT:
OTTMUST00000059719
UniParc:
UPI00001F3DF9
definition
note
: transcript_id=ENSMUST00000111535
protein_id
: ENSMUSP00000107160
translation
: MPLSGVVSQLLELCLQYLVINISRYISDIKYLPSNIKDRLIKIMSIRGRITDSNISEVLHPEVQRLDLRSCDISDVALQHLCKCRKLKALNLKSCREHRNSITSEGIKAVASSCSDLHEIYLKGCCSVTDEGVLALALNCHLLKIIDLGGCLGITDVSLHALGKNCPFLQCVDISTTQVSDNGVVALVSGPCAKQLEEINMRYCINLTDKAVEAALTACPRICILLFHGCPLITDRSQEVLEQLIGSRKLKQVTWSVY
name
type
misc_feature
link
xref
definition
note
: contig AC128664.3 47188..147041(1)
name
Amn1 (ENSMUSG00000068250)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000059721
Vega_transcript:
OTTMUST00000059721
UCSC:uc012evy.1
MGI_trans_name:
Amn1-004
OTTT:
OTTMUST00000059721
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000150610
name
Amn1 (ENSMUSG00000068250)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000141468
Vega_transcript:
OTTMUST00000141468
UCSC:uc012evy.1
MGI_trans_name:
Amn1-012
OTTT:
OTTMUST00000141468
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000204681
name
Amn1 (ENSMUSG00000068250)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000059770
Vega_transcript:
OTTMUST00000059770
MGI_trans_name:
Amn1-008
OTTT:
OTTMUST00000059770
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000149149
name
Amn1 (ENSMUSG00000068250)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000059768
Vega_transcript:
OTTMUST00000059768
MGI_trans_name:
Amn1-006
OTTT:
OTTMUST00000059768
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000152062
name
Amn1 (ENSMUSG00000068250)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000141469
Vega_transcript:
OTTMUST00000141469
MGI_trans_name:
Amn1-011
OTTT:
OTTMUST00000141469
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000203043
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.