VariantTable
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BAC clone ordering.
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name
Sbspon (ENSMUSG00000032719)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Sbspon
note
: somatomedin B and thrombospondin, type 1 domain containing [Source:MGI Symbol;Acc:MGI:2684952]
name
Sbspon (ENSMUSG00000032719)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000040695
name
Sbspon (ENSMUSG00000032719)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14828.1
Uniprot/SWISSPROT:
Q3UPR9
RefSeq_peptide:
NP_001028460
RefSeq_mRNA:
NM_001033288.3
Vega_transcript:
OTTMUST00000065331
Vega_transcript:
Sbspon-001
UCSC:uc007ajj.1
Fantom:
9530008A11
Fantom:
E230016O14
EMBL:
AK137144
EMBL:
AK143251
EMBL:
BC147194
EMBL:
BC147195
GO:
GO:0003674
GO:
GO:0005044
GO:
GO:0005578
GO:
GO:0006898
GO:
GO:0006955
GO:
GO:0008150
GO:
GO:0030247
GO:
GO:0031012
GO:
GO:0031012
MGI_trans_name:
Sbspon-001
Vega_translation:
178753
Vega_translation:
OTTMUSP00000032547
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005578
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016192
protein_id:
AAI47195.1
protein_id:
AAI47196.1
protein_id:
BAE23250.1
protein_id:
BAE25326.1
OTTP:
OTTMUSP00000032547
OTTT:
OTTMUST00000065331
UniParc:
UPI00001C20F2
definition
note
: transcript_id=ENSMUST00000040695
protein_id
: ENSMUSP00000047730
translation
: MKTLWMVLCALARLWPGALAGCAEAGRCCPGRDPACFARGWRLDRVYGTCFCDQACRLTGDCCFDYDRACPARPCFVGEWSPWSGCAGQCQPTTRVRRRSVRQEPLNGGAPCPPLEERAGCLEYSSSQSQDCGHSFVPAFITSSVFNKKRIIQAVSPQWSTHTKDAGYCMEFKTESLTPHCALVNSPLTRWMQYLREGYTVCVDCQPPAMNSVSLRCSGDGLDSDGNQTLRWQAIGNPRCQGTWKKVRRVEQCSCPDVHRFIFI
name
type
misc_feature
link
xref
definition
note
: contig AC109269.17 1..163563(-1)
Location
chromosome :
1
2
3
4
5
6
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8
9
10
11
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14
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19
X
(Build: mm10)
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Annotation:
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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KJRv1 :
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SWNv1 :
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CHDv1 :
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NJLv1 :
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BLG2v1 :
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HMIv1 :
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BFMv1 :
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PGNv1 :
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