VariantTable
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name
Col19a1 (ENSMUSG00000026141)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Col19a1
note
: collagen, type XIX, alpha 1 [Source:MGI Symbol;Acc:MGI:1095415]
name
Col19a1 (ENSMUSG00000026141)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000115244
name
Col19a1 (ENSMUSG00000026141)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000051344
name
Col19a1 (ENSMUSG00000026141)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14854.1
Uniprot/SWISSPROT:
Q0VF58
RefSeq_peptide:
NP_031759
RefSeq_mRNA:
NM_007733.2
RefSeq_mRNA_predicted:
XM_006495645
RefSeq_peptide_predicted:
XP_006495705.1
RefSeq_peptide_predicted:
XP_006495706.1
RefSeq_peptide_predicted:
XP_006495707.1
RefSeq_peptide_predicted:
XP_006495708.1
Vega_transcript:
Col19a1-001
Vega_transcript:
OTTMUST00000050756
UCSC:uc007amq.1
EMBL:
AB000636
EMBL:
AC116998
EMBL:
AC130201
EMBL:
AC161879
EMBL:
BC118970
GO:
GO:0005578
GO:
GO:0005581
GO:
GO:0007155
GO:
GO:0007519
GO:
GO:0030154
GO:
GO:0030198
MGI_trans_name:
Col19a1-001
Vega_translation:
178851
Vega_translation:
OTTMUSP00000023781
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005578
goslim_goa:
GO:0007155
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0030198
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
protein_id:
AAI18971.1
protein_id:
BAA23578.1
OTTP:
OTTMUSP00000023781
OTTT:
OTTMUST00000050756
Reactome:
R-MMU-1442490
Reactome:
R-MMU-1474228
Reactome:
R-MMU-1474244
Reactome:
R-MMU-1474290
Reactome:
R-MMU-1650814
UniParc:
UPI00000227F7
definition
note
: transcript_id=ENSMUST00000115244
protein_id
: ENSMUSP00000110899
translation
: MRHTGSWKLWTWVTTFLLPACTCLTVRDKPETTCPTLRTERYQDDRNKSELSGFDLGESFALRHAFCEGDKTCFKLGSVLLIRDTVKIFPKGLPEEYAIAVMFRVRRSTKKERWFLWKILNQQNMAQISVVIDGTKKVVEFMFRGAEGDLLNYVFKNRELRPLFDRQWHKLGIGVQSRVLSLYMDCNLIASRHTEEKNSVDFQGRTIIAARASDGKPVDIELHQLRIYCNANFLAEESCCNLSPTKCPEQDDFGSTTSSWGTSNTGKMSSYLPGKQELKDTCQCIPNKEEAGLPGTLRSIGHKGDKGEPGEHGLDGTPGLPGQKGEQGLEGIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPKGDKGDMGPPGPPALTGSIGIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQQPFGGYFNKGTGEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPGLLGSPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGEPGIQGPRGLPGLPGTPGMPGNDGAPGKDGKPGLPGPPGDPIALPLLGDIGALLKNFCGNCQANVPGLKSIKGDDGSTGEPGKYDPAARKGDVGPRGPPGFPGREGPKGSKGERGYPGIHGEKGDEGLQGIPGLSGAPGPTGPPGLTGRTGHPGPTGAKGDKGSEGPPGKPGPPGPPGVPLNEGNGMSSLYKIQGGVNVPGYPGPPGPPGPKGDPGPVGEPGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGPEGPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGAIGPVGPAGSKGSTGPPGHQGPPGNPGIPGTPADAVSFEEIKHYINQEVLRIFEERMAVFLSQLKLPAAMLSAQAHGRPGPPGKDGLPGPPGDPGPQGYRGQKGERGEPGIGLPGSPGLPGSSAVGLPGSPGAPGPQGPPGPSGRCNPEDCLYPAPPPHQQAGGK
name
Col19a1 (ENSMUSG00000026141)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Col19a1-003
Vega_transcript:
OTTMUST00000050758
Uniprot/SPTREMBL:
F8WHV4
UCSC:uc007amr.1
EMBL:
AC116997
EMBL:
AC130201
EMBL:
AC161879
GO:
GO:0007519
GO:
GO:0030198
MGI_trans_name:
Col19a1-003
Vega_translation:
178852
Vega_translation:
OTTMUSP00000023782
goslim_goa:
GO:0008150
goslim_goa:
GO:0030198
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000023782
OTTT:
OTTMUST00000050758
UniParc:
UPI0000F2204A
definition
note
: transcript_id=ENSMUST00000051344
protein_id
: ENSMUSP00000052606
translation
: MRHTGSWKLWTWVTTFLLPACTCLTVRDKPETTCPTLRTERYQDDRNKSELSGFDLGESFALRHAFCEGDKTCFKLGSVLLIRDTVKIFPKGLPEEYAIAVMFRVRRSTKKERWFLWKILNQQNMAQISVVIDGTKKVVEFMFRGAEGDLLNYVFKNRELRPLFDRQWHKLGIGVQSRVLSLYMDCNLIASRHTEEKNSVDFQGRTIIAARASDGKPVDIELHQLRIYCNANFLAEESCCNLSPTKCPEQDDFGSTTSSWGTSNTGKMSSYLPGKQELKDTCQCIPNKEEAGLPGTLRSIGHKGDKGEPGEHGLDGTPGLPGQKGEQGLEGIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPKGDKGDMGPPGPPALTGSIGIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQQPFGGYFNKGTGEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPGLLGSPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGEPGIQGPRGLPGLPGTPGMPGNDGAPGKDGKPGLPGPPGDPIALPLLGDIGALLKNFCGNCQANVPGLKSIKGDDGSTGEPGKYDPAARKGDVGPRGPPGFPGREGPKGSKGERGYPGIHGEKGDEGLQGIPGLSGAPGPTGPPGLTGRTGHPGPTGAKGDKGSEGPPGKPGPPGPPGVPLNEGNGMSSLYKIQGGVNVPGYPGPPGPPGPKGDPGPVGEPGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGPEGPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGAIGPVGPAGSKGSTGPPGHQGPPGNPGIPGTPADAVSFEEIKHYINQEVLRIFEGQVCFIILLDFLLPIPLWGIPSVTFLNCDSNLSRLSVSWRGSSC
name
type
misc_feature
link
xref
definition
note
: contig AC116997.3 22628..190712(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.