VariantTable
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name
Phf3 (ENSMUSG00000048874)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Phf3
note
: PHD finger protein 3 [Source:MGI Symbol;Acc:MGI:2446126]
name
Phf3 (ENSMUSG00000048874)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000186733
name
Phf3 (ENSMUSG00000048874)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000088310
name
Phf3 (ENSMUSG00000048874)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35530.1
RefSeq_mRNA_predicted:
XM_006495836.2
RefSeq_mRNA_predicted:
XM_006495837.2
RefSeq_mRNA_predicted:
XM_006495838.2
RefSeq_mRNA_predicted:
XM_011238470.1
RefSeq_mRNA_predicted:
XM_011238471.1
RefSeq_peptide_predicted:
XP_006495899.1
RefSeq_peptide_predicted:
XP_006495900.1
RefSeq_peptide_predicted:
XP_006495901.1
RefSeq_peptide_predicted:
XP_011236772.1
RefSeq_peptide_predicted:
XP_011236773.1
Vega_transcript:
OTTMUST00000124826
Vega_transcript:
Phf3-003
Uniprot/SPTREMBL:
B2RQG2
UCSC:uc007ane.1
EMBL:
AC124469
EMBL:
AC153137
EMBL:
BC137913
GO:
GO:0003674
GO:
GO:0005575
GO:
GO:0005634
GO:
GO:0006351
GO:
GO:0008150
GO:
GO:0008270
MGI_trans_name:
Phf3-003
Vega_translation:
178864
Vega_translation:
OTTMUSP00000067830
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAI37914.1
OTTP:
OTTMUSP00000067830
OTTT:
OTTMUST00000124826
UniParc:
UPI00001E2FEF
definition
note
: transcript_id=ENSMUST00000186733
protein_id
: ENSMUSP00000139610
translation
: MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSTSQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRSLRDRVEDNSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAATLSTKKPSGKTLSTSKVGVKPAERCQGKEEVYASLKSEHPKESRRSGRHAEQMDVAPEVSASSVDSSVSSCAGMKEEAEFDPKHACNNQGEVNVPSPELDCPLLSETSASVEEKNIEALMECKAKTNSSPLFKFPVREDEQSDLVSGELNDTIEGKDAGGKPDQESEEVKFPCEGDQTAEEPESSDVSSDSACANKNKAEKNEGAECHLELKNTVDIVDKPENSPQRNELETLGYGEDTESNDARLQSTEFNKSDLEEVDACAFEPEASTLENTICDVLDQNSKQLNITQSIKMETANLQDDRSGLEPKNIKPKHIKSVTHSKQSMTTETPRKTVAAKHEVGHSKTKSNVKAVKRNSGEPEPQPDSQRPVKVRKKQGDKVWKSQSCNSGVKSVKSQAHSVLKRMPQDQNTMQISKPLTHPHSDKLHGHSGFSKEPPHPVQTGHLVHSSQKQSQKPQQQAAVGKGSSHVKDEHDHPVSEHLKEDDKLKPRKPDRNLQPRQRRSSRSFSLDEPPLFIPDNIATVKKEGSDQTTSIESKYMWTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVRCCAEEDKKTDILDTEIFEAQAPIEAHSEDKRMECGKLTSSKHAVTDDKHRHSDDPGKHKVKILKRESGEGKTSSDSRDNEIKKWQLAPLRKLSQPHLPRRSSEEKSEKIAKESTALASTGERVARSGTHEKQETKKKKMEKGGPNVHPPAATSKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAIEIQEPSANKSMEKPDVSEKQKEEVDSTSKDTTSQHRQHLFDLNCKICIGRMAPPIDDLSPKTVKVVVGGARKHSDNEAESLADALSSTTNILTSDLFEEEKQESPKSTFSPTPRPEMPGTVEVESTFLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGAADKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRPHSASAGPSHTGETPESAPIVLPPDKKGKMESCTEEAAEEESDFFNSFTTVLHKQRNKPSQPLQEDLPTAAEPLMEVTKQEPPKPLRFLPGVLIGWDNQPSTLELANKPLPVDDILQSLLGTTGQVYEQAQPLVEQSTLKEIPFINDQANPKVEKIDKVEVTEGDAKEIKVKAENISVSTSKNSGEETSSVGSSSISPGPLASLSLRGKPPDVSTEAFLTNLSIPSKQEESVENKERTLKRLLLQDQENSLQDNRTSSDSPCWPGTGKGGMDGDGSGSGSGSGSGSEGPVANTRAPQFINLKRDPRQAAGRSQQTASESKDAESCRNGDKHAASAPPHNKEPLAEAVGGEGKLPSQEKSSCVEQNDDSEAAPNSSSVENLNSSQAEQANPSQEDVLTQNIETVHPFRRGSAPTSSRFEGGNTCQSEFPSKSVSFTCRSSSPRASTNFSPMRPQQPNLQHLKSSPPGFPFPGPQNFPPQNMFGFPPHLSPPLLPPPGFGFPQNPPMVPWPPVHVPGQPQRMMGPLSQASRYMGPQNFYQVKDIRRPERRHSDPWGRQDQQQPDRPFNRGKGDRQRFYSDSHHLKRERHDKDWEQESERHRHRDRSQERDRDRKSKEEAAAHKDKERPRLSHGDRAPDGKASRDGKSADKKPDRPKGEDHEKEKERDKSKHKEGEKDRERYHKDRDHTDRVKSKR
name
Phf3 (ENSMUSG00000048874)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35530.1
RefSeq_peptide:
NP_001074549
RefSeq_mRNA:
NM_001081080.1
RefSeq_mRNA_predicted:
XM_006495837.2
RefSeq_mRNA_predicted:
XM_006495838.2
RefSeq_mRNA_predicted:
XM_011238470.1
RefSeq_mRNA_predicted:
XM_011238471.1
RefSeq_peptide_predicted:
XP_006495900.1
RefSeq_peptide_predicted:
XP_006495901.1
RefSeq_peptide_predicted:
XP_011236772.1
RefSeq_peptide_predicted:
XP_011236773.1
Uniprot/SPTREMBL:
B2RQG2
UCSC:uc007ane.1
EMBL:
AC124469
EMBL:
AC153137
EMBL:
BC137913
GO:
GO:0003674
GO:
GO:0005575
GO:
GO:0005634
GO:
GO:0006351
GO:
GO:0008150
GO:
GO:0008270
MGI_trans_name:
Phf3-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAI37914.1
UniParc:
UPI00001E2FEF
definition
note
: transcript_id=ENSMUST00000088310
protein_id
: ENSMUSP00000085650
translation
: MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSTSQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRSLRDRVEDNSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAATLSTKKPSGKTLSTSKVGVKPAERCQGKEEVYASLKSEHPKESRRSGRHAEQMDVAPEVSASSVDSSVSSCAGMKEEAEFDPKHACNNQGEVNVPSPELDCPLLSETSASVEEKNIEALMECKAKTNSSPLFKFPVREDEQSDLVSGELNDTIEGKDAGGKPDQESEEVKFPCEGDQTAEEPESSDVSSDSACANKNKAEKNEGAECHLELKNTVDIVDKPENSPQRNELETLGYGEDTESNDARLQSTEFNKSDLEEVDACAFEPEASTLENTICDVLDQNSKQLNITQSIKMETANLQDDRSGLEPKNIKPKHIKSVTHSKQSMTTETPRKTVAAKHEVGHSKTKSNVKAVKRNSGEPEPQPDSQRPVKVRKKQGDKVWKSQSCNSGVKSVKSQAHSVLKRMPQDQNTMQISKPLTHPHSDKLHGHSGFSKEPPHPVQTGHLVHSSQKQSQKPQQQAAVGKGSSHVKDEHDHPVSEHLKEDDKLKPRKPDRNLQPRQRRSSRSFSLDEPPLFIPDNIATVKKEGSDQTTSIESKYMWTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVRCCAEEDKKTDILDTEIFEAQAPIEAHSEDKRMECGKLTSSKHAVTDDKHRHSDDPGKHKVKILKRESGEGKTSSDSRDNEIKKWQLAPLRKLSQPHLPRRSSEEKSEKIAKESTALASTGERVARSGTHEKQETKKKKMEKGGPNVHPPAATSKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAIEIQEPSANKSMEKPDVSEKQKEEVDSTSKDTTSQHRQHLFDLNCKICIGRMAPPIDDLSPKTVKVVVGGARKHSDNEAESLADALSSTTNILTSDLFEEEKQESPKSTFSPTPRPEMPGTVEVESTFLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGAADKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRPHSASAGPSHTGETPESAPIVLPPDKKGKMESCTEEAAEEESDFFNSFTTVLHKQRNKPSQPLQEDLPTAAEPLMEVTKQEPPKPLRFLPGVLIGWDNQPSTLELANKPLPVDDILQSLLGTTGQVYEQAQPLVEQSTLKEIPFINDQANPKVEKIDKVEVTEGDAKEIKVKAENISVSTSKNSGEETSSVGSSSISPGPLASLSLRGKPPDVSTEAFLTNLSIPSKQEESVENKERTLKRLLLQDQENSLQDNRTSSDSPCWPGTGKGGMDGDGSGSGSGSGSGSEGPVANTRAPQFINLKRDPRQAAGRSQQTASESKDAESCRNGDKHAASAPPHNKEPLAEAVGGEGKLPSQEKSSCVEQNDDSEAAPNSSSVENLNSSQAEQANPSQEDVLTQNIETVHPFRRGSAPTSSRFEGGNTCQSEFPSKSVSFTCRSSSPRASTNFSPMRPQQPNLQHLKSSPPGFPFPGPQNFPPQNMFGFPPHLSPPLLPPPGFGFPQNPPMVPWPPVHVPGQPQRMMGPLSQASRYMGPQNFYQVKDIRRPERRHSDPWGRQDQQQPDRPFNRGKGDRQRFYSDSHHLKRERHDKDWEQESERHRHRDRSQERDRDRKSKEEAAAHKDKERPRLSHGDRAPDGKASRDGKSADKKPDRPKGEDHEKEKERDKSKHKEGEKDRERYHKDRDHTDRVKSKR
name
type
misc_feature
link
xref
definition
note
: contig AC124469.4 9857..162294(1)
name
Phf3 (ENSMUSG00000048874)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000124828
Vega_transcript:
OTTMUST00000124828
MGI_trans_name:
Phf3-002
OTTT:
OTTMUST00000124828
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000186105
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.