VariantTable
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BAC clone ordering.
cursor point :
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On read coverage region : Click to browse alignment view.
name
Exoc4 (ENSMUSG00000029763)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Exoc4
note
: exocyst complex component 4 [Source:MGI Symbol;Acc:MGI:1096376]
name
Exoc4 (ENSMUSG00000029763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000052266
name
Exoc4 (ENSMUSG00000029763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS19987.1
Uniprot/SWISSPROT:
O35382
RefSeq_peptide:
NP_033174
RefSeq_mRNA:
NM_009148.3
Vega_transcript:
Exoc4-001
Vega_transcript:
OTTMUST00000035033
UCSC:uc009bgt.1
EMBL:
AF022962
EMBL:
BC034644
GO:
GO:0000145
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0005886
GO:
GO:0006904
GO:
GO:0015031
GO:
GO:0016020
GO:
GO:0016020
GO:
GO:0017160
GO:
GO:0017160
GO:
GO:0030165
GO:
GO:0032584
GO:
GO:0035748
GO:
GO:0047485
GO:
GO:0047485
MGI_trans_name:
Exoc4-001
Vega_translation:
196887
Vega_translation:
OTTMUSP00000015637
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0008150
goslim_goa:
GO:0016192
goslim_goa:
GO:0019899
goslim_goa:
GO:0043234
protein_id:
AAB86537.1
protein_id:
AAH34644.1
OTTP:
OTTMUSP00000015637
OTTT:
OTTMUST00000035033
Reactome:
R-MMU-1445148
Reactome:
R-MMU-1852241
Reactome:
R-MMU-199991
Reactome:
R-MMU-264876
Reactome:
R-MMU-2980736
Reactome:
R-MMU-392499
Reactome:
R-MMU-5617833
Reactome:
R-MMU-5620916
Reactome:
R-MMU-5620920
Reactome:
R-MMU-5653656
UniParc:
UPI0000029640
definition
note
: transcript_id=ENSMUST00000052266
protein_id
: ENSMUSP00000051965
translation
: MAAEAAGGKYRSTVSKSKDPSGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENLLSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQVPQKLEQCMASKHYLSATDMLVSAVESLEGPLLQVEGLSDLRLELHSKKMNLHLVLIEELHRHLYIKSTSRVVQRNKEKGKMSSHGKDPSPGPLIDVSNIPTPRKFLDASQYSAAGGSSVREMNLQDVKEDLECDPEENSTLFMGILIQGLARLKKIPETVKAIKERLEQELKQIVKRSTTQVADSAYQRGESLTVDNQPRLLLELLELLFDKFNAVATAHSVVLGYLQDSVGTQLTQQEEIKLYDMADVWVKIQDVLQMLLTEYLDMKNTRTASEPSAQLSYASTGREFAAFFAKKKPQRPKNSLFKFESSSHAISMSAYLREQRRELYSRSGELQGGPDDNLIEGGGTKFVCKPGARNITVIFHPLLRFIQEIEHALGLGPAKQCPLREFLTVYIKSIFLNQVLAEINKEIEGVTKTSDPLKILANADTMKVLGVQRPLLQSTIIVEKTVQDLMNLMHDLSAYSDQFLNMVCVKLQEYKDTCSTAYRGIVQSEEKLVISASWAKDDDISRLLKSLPNWTNMAQPKQLRPKREEEEDFIRAAFGKESEVLIGNLGDKLIPPQDILRDVSDLKALANMHESLEWLAGRTKSAFSNLSTSQMLSPAQESHVNMDLPPVSEQIMQTLSELAKTFQDMADRCLLVLHLEVRVHCFHYLIPLAKEGNYAIVANVESMDYDPLVVKLNKDISAMEEAMSASLQQHKFQYIFEGLGHLISCILINGAQYFRRISESGIKKMCRNIFVLQQNLTNITMSREADLDFARQYYEMLYNTADELLNLVVDQGVKYTELEYIHALTLLHRSQTGVGDQTTQNTRLQRLKEIICEQAAIKQATKDKKITTV
name
type
misc_feature
link
xref
definition
note
: contig AC141927.3 1..123169(-1)
name
Exoc4 (ENSMUSG00000029763)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000035034
Vega_transcript:
OTTMUST00000035034
MGI_trans_name:
Exoc4-002
OTTT:
OTTMUST00000035034
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000132842
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.