VariantTable
SequenceCutter
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Updated genome
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BAC clone ordering.
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name
Sox2ot (ENSMUSG00000105265)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Sox2ot
note
: SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
name
type
misc_feature
link
xref
definition
note
: contig AC122749.9 1..172221(-1)
name
Sox2ot (ENSMUSG00000105265)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000095009
Vega_transcript:
OTTMUST00000095009
MGI_trans_name:
Sox2ot-006
OTTT:
OTTMUST00000095009
RNACentral:URS00007660F6
definition
note
: sense_overlapping
note
: transcript_id=ENSMUST00000196793
name
Sox2ot (ENSMUSG00000105265)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000095010
Vega_transcript:
OTTMUST00000095010
MGI_trans_name:
Sox2ot-009
OTTT:
OTTMUST00000095010
RNACentral:URS0000780806
definition
note
: sense_overlapping
note
: transcript_id=ENSMUST00000196243
name
Sox2ot (ENSMUSG00000105265)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000095011
Vega_transcript:
OTTMUST00000095011
MGI_trans_name:
Sox2ot-007
OTTT:
OTTMUST00000095011
RNACentral:URS000076F8F1
definition
note
: sense_overlapping
note
: transcript_id=ENSMUST00000196058
name
Sox2ot (ENSMUSG00000105265)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000095012
Vega_transcript:
OTTMUST00000095012
MGI_trans_name:
Sox2ot-008
OTTT:
OTTMUST00000095012
RNACentral:URS000076F73D
definition
note
: sense_overlapping
note
: transcript_id=ENSMUST00000200625
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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show
MSM BAC end pairs :
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show
B6N BAC end pairs :
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show
MSMv4 :
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show
JF1v3 :
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show
KJRv1 :
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show
SWNv1 :
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show
CHDv1 :
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show
NJLv1 :
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show
BLG2v1 :
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show
HMIv1 :
not show
show
BFMv1 :
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show
PGNv1 :
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show
Click to browse alignment view.