VariantTable
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BAC clone ordering.
cursor point :
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On read coverage region : Click to browse alignment view.
name
Actr1b (ENSMUSG00000037351)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Actr1b
note
: ARP1 actin-related protein 1B, centractin beta [Source:MGI Symbol;Acc:MGI:1917446]
name
Actr1b (ENSMUSG00000037351)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000043951
name
Actr1b (ENSMUSG00000037351)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14887.1
Uniprot/SWISSPROT:
Q8R5C5
RefSeq_peptide:
NP_666219
RefSeq_mRNA:
NM_146107.2
RefSeq_mRNA_predicted:
XM_011238485.1
RefSeq_peptide_predicted:
XP_011236787.1
Vega_transcript:
Actr1b-001
Vega_transcript:
OTTMUST00000086602
UCSC:uc007aqx.1
Fantom:
E430027O12
EMBL:
AK088839
EMBL:
BC023020
GO:
GO:0003674
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0005813
GO:
GO:0005813
GO:
GO:0005869
GO:
GO:0008150
GO:
GO:0016020
GO:
GO:0016020
GO:
GO:0070062
GO:
GO:0070062
MGI_trans_name:
Actr1b-001
Vega_translation:
178995
Vega_translation:
OTTMUSP00000046893
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005815
goslim_goa:
GO:0005856
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
protein_id:
AAH23020.1
protein_id:
BAC40604.1
OTTP:
OTTMUSP00000046893
OTTT:
OTTMUST00000086602
Reactome:
R-MMU-1280218
Reactome:
R-MMU-168256
Reactome:
R-MMU-2132295
UniParc:
UPI0000025B1D
definition
note
: transcript_id=ENSMUST00000043951
protein_id
: ENSMUSP00000047326
translation
: MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF
name
type
misc_feature
link
xref
definition
note
: contig AC084389.1 1..206297(-1)
name
Actr1b (ENSMUSG00000037351)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000086606
Vega_transcript:
OTTMUST00000086606
MGI_trans_name:
Actr1b-005
OTTT:
OTTMUST00000086606
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000159675
Location
chromosome :
1
2
3
4
5
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7
8
9
10
11
12
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14
15
16
17
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19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
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RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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KJRv1 :
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SWNv1 :
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CHDv1 :
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NJLv1 :
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BLG2v1 :
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HMIv1 :
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BFMv1 :
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PGNv1 :
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Click to browse alignment view.
BAC clone ordering.