VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Zap70 (ENSMUSG00000026117)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Zap70
note
: zeta-chain (TCR) associated protein kinase [Source:MGI Symbol;Acc:MGI:99613]
name
Zap70 (ENSMUSG00000026117)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000027291
name
Zap70 (ENSMUSG00000026117)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14888.1
Uniprot/SWISSPROT:
P43404
RefSeq_peptide:
NP_001276694
RefSeq_peptide:
NP_001276695.1
RefSeq_peptide:
NP_033565
RefSeq_mRNA:
NM_001289765.1
RefSeq_mRNA:
NM_001289766.1
RefSeq_mRNA:
NM_009539.3
RefSeq_mRNA_predicted:
XM_006495896
RefSeq_mRNA_predicted:
XM_006495897
RefSeq_peptide_predicted:
XP_006495959.1
Vega_transcript:
OTTMUST00000126145
Vega_transcript:
Zap70-001
UCSC:uc007aqz.2
Fantom:
A430025D01
ChEMBL:CHEMBL2034801
EMBL:
AB083210
EMBL:
AB084383
EMBL:
AC084389
EMBL:
AK039883
EMBL:
BC029727
EMBL:
U04379
EMBL:
U77667
GO:
GO:0001772
GO:
GO:0001784
GO:
GO:0002250
GO:
GO:0004672
GO:
GO:0004713
GO:
GO:0004715
GO:
GO:0005102
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005737
GO:
GO:0005829
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0005911
GO:
GO:0006468
GO:
GO:0006955
GO:
GO:0006955
GO:
GO:0007169
GO:
GO:0016477
GO:
GO:0018108
GO:
GO:0018108
GO:
GO:0030154
GO:
GO:0031234
GO:
GO:0035556
GO:
GO:0038083
GO:
GO:0042101
GO:
GO:0042101
GO:
GO:0043366
GO:
GO:0045059
GO:
GO:0045059
GO:
GO:0045060
GO:
GO:0045061
GO:
GO:0045087
GO:
GO:0045121
GO:
GO:0045121
GO:
GO:0045582
GO:
GO:0045582
GO:
GO:0046638
GO:
GO:0046641
GO:
GO:0046777
GO:
GO:0050850
GO:
GO:0050852
MGI_trans_name:
Zap70-001
Vega_translation:
178998
Vega_translation:
OTTMUSP00000068269
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005829
goslim_goa:
GO:0005886
goslim_goa:
GO:0006464
goslim_goa:
GO:0006950
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0016301
goslim_goa:
GO:0030154
goslim_goa:
GO:0040011
goslim_goa:
GO:0043167
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0048870
protein_id:
AAA19250.1
protein_id:
AAB36538.1
protein_id:
AAH29727.1
protein_id:
BAC30471.1
protein_id:
BAC43746.1
protein_id:
BAC67015.1
OTTP:
OTTMUSP00000068269
OTTT:
OTTMUST00000126145
Reactome:
R-MMU-1280218
Reactome:
R-MMU-168256
Reactome:
R-MMU-202403
Reactome:
R-MMU-202430
Reactome:
R-MMU-202433
UniParc:
UPI00000227E3
definition
note
: transcript_id=ENSMUST00000027291
protein_id
: ENSMUSP00000027291
translation
: MPDPAAHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCQFYSQDPDGLPCNLRKPCNRPPGLEPQPGVFDCLRDAMVRDYVRQTWKLEGDALEQAIISQAPQVEKLIATTAHERMPWYHSSLTREEAERKLYSGQQTDGKFLLRPRKEQGTYALSLVYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIYRLKEVCPNSSASAAVAAPTLPAHPSTFTQPQRRVDTLNSDGYTPEPARLASSTDKPRPMPMDTSVYESPYSDPEELKDKKLFLKRENLLVADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADKDEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLLGKKEEIPVSNVAELLHQVAMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAFSYGQKPYKKMKGPEVLDFIKQGKRMECPPECPPEMYALMSDCWIYKWEDRPDFLTVEQRMRNYYYSLASRAEGPPQCEQVAEAACG
name
type
misc_feature
link
xref
definition
note
: contig AC084389.1 1..206297(-1)
name
Zap70 (ENSMUSG00000026117)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000126147
Vega_transcript:
OTTMUST00000126147
MGI_trans_name:
Zap70-004
OTTT:
OTTMUST00000126147
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000186624
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.