VariantTable
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name
Gramd1b (ENSMUSG00000040111)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Gramd1b
note
: GRAM domain containing 1B [Source:MGI Symbol;Acc:MGI:1925037]
name
Gramd1b (ENSMUSG00000040111)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000119373
name
Gramd1b (ENSMUSG00000040111)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000165104
name
Gramd1b (ENSMUSG00000040111)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000045682
name
Gramd1b (ENSMUSG00000040111)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_mRNA_predicted:
XM_006510244.2
RefSeq_peptide_predicted:
XP_006510307.1
Vega_transcript:
Gramd1b-002
Vega_transcript:
OTTMUST00000078749
Uniprot/SPTREMBL:
D3YWR0
UCSC:uc009ozn.1
EMBL:
AC132474
EMBL:
AC135353
GO:
GO:0003674
GO:
GO:0008150
GO:
GO:0016020
MGI_trans_name:
Gramd1b-002
Vega_translation:
205120
Vega_translation:
OTTMUSP00000041912
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0008150
OTTP:
OTTMUSP00000041912
OTTT:
OTTMUST00000078749
UniParc:
UPI000173A6FE
definition
note
: transcript_id=ENSMUST00000119373
protein_id
: ENSMUSP00000112489
translation
: MNSFPNRPSSQQSSQQSSHDDDSSRFLSPRVRDESTASNSNRSTPACSPILRKRSRSPTPQNQDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKVSRKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPIEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVMEGDGSLEKELAIDNIIGEKIEIMAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTNSPFLRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGFVKTFIEKNFWSGLEDYFRHLETELTKTESTYLAEIHRQSPKEKASKSSAVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPDGFHLQSVSKLLLVISCVLVLLVVLNMMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVLLLDQMKDSLINLQNGIRSRDYTAESDEKRNRYH
name
Gramd1b (ENSMUSG00000040111)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS23081.1
Uniprot/SWISSPROT:
Q80TI0
RefSeq_peptide_predicted:
XP_006510298.1
RefSeq_peptide_predicted:
XP_006510299.1
RefSeq_peptide_predicted:
XP_006510300.1
RefSeq_peptide_predicted:
XP_011240786.1
UCSC:uc009ozq.1
GO:
GO:0003674
GO:
GO:0008150
GO:
GO:0016020
GO:
GO:0016020
GO:
GO:0016021
MGI_trans_name:
Gramd1b-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0008150
UniParc:
UPI0000027393
definition
note
: transcript_id=ENSMUST00000165104
protein_id
: ENSMUSP00000130050
translation
: MPAANMMENLQLPALQVPEPQGAPEGSAVWSSSSTPTLRRRRFKMRRMKNVQEQSLEAGLVAPDLPGVLAPGKEFLQLPSIEITPSSDEDTPWSNCSTPSASPRRKRFLLRKWLRVRERKECSESSSQQSSQQSSHDDDSSRFLSPRVRDESTASNSNRSTPACSPILRKRSRSPTPQNQDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPIEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVMEGDGSLEKELAIDNIIGEKIEIMAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTNSPFLRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGFVKTFIEKNFWSGLEDYFRHLETELTKTESTYLAEIHRQSPKEKASKSSAVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPDGFHLQSVSKLLLVISCVLVLLVVLNMMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVLLLDQMKDSLINLQNGIRSRDYTAESDEKRNRYH
name
Gramd1b (ENSMUSG00000040111)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS23081.1
Uniprot/SWISSPROT:
Q80TI0
RefSeq_peptide:
NP_766356
RefSeq_mRNA:
NM_172768.1
RefSeq_peptide_predicted:
XP_006510298.1
RefSeq_peptide_predicted:
XP_006510299.1
RefSeq_peptide_predicted:
XP_006510300.1
RefSeq_peptide_predicted:
XP_011240786.1
Vega_transcript:
Gramd1b-001
Vega_transcript:
OTTMUST00000078748
UCSC:uc009ozq.1
GO:
GO:0003674
GO:
GO:0008150
GO:
GO:0016020
GO:
GO:0016021
MGI_trans_name:
Gramd1b-001
Vega_translation:
205122
Vega_translation:
OTTMUSP00000041911
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0008150
OTTP:
OTTMUSP00000041911
OTTT:
OTTMUST00000078748
UniParc:
UPI0000027393
definition
note
: transcript_id=ENSMUST00000045682
protein_id
: ENSMUSP00000048126
translation
: MPAANMMENLQLPALQVPEPQGAPEGSAVWSSSSTPTLRRRRFKMRRMKNVQEQSLEAGLVAPDLPGVLAPGKEFLQLPSIEITPSSDEDTPWSNCSTPSASPRRKRFLLRKWLRVRERKECSESSSQQSSQQSSHDDDSSRFLSPRVRDESTASNSNRSTPACSPILRKRSRSPTPQNQDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPIEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVMEGDGSLEKELAIDNIIGEKIEIMAPVTSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTNSPFLRDFMEQRRFSDIIFHPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGFVKTFIEKNFWSGLEDYFRHLETELTKTESTYLAEIHRQSPKEKASKSSAVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPDGFHLQSVSKLLLVISCVLVLLVVLNMMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVLLLDQMKDSLINLQNGIRSRDYTAESDEKRNRYH
name
type
misc_feature
link
xref
definition
note
: contig AC132474.3 1..200451(-1)
name
Gramd1b (ENSMUSG00000040111)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000078751
Vega_transcript:
OTTMUST00000078751
MGI_trans_name:
Gramd1b-004
OTTT:
OTTMUST00000078751
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000148170
name
Gramd1b (ENSMUSG00000040111)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000078750
Vega_transcript:
OTTMUST00000078750
MGI_trans_name:
Gramd1b-003
OTTT:
OTTMUST00000078750
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000129940
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.