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name
Atxn1 (ENSMUSG00000046876)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Atxn1
note
: ataxin 1 [Source:MGI Symbol;Acc:MGI:104783]
name
Atxn1 (ENSMUSG00000046876)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000180110
name
Atxn1 (ENSMUSG00000046876)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000091628
name
Atxn1 (ENSMUSG00000046876)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000167708
name
Atxn1 (ENSMUSG00000046876)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS56877.1
RefSeq_peptide:
NP_001186234
RefSeq_mRNA:
NM_001199305.1
Uniprot/SPTREMBL:
J3QPR1
UCSC:uc011yyw.2
EMBL:
AC126426
EMBL:
AC154401
EMBL:
AC154733
EMBL:
AC154817
GO:
GO:0000122
GO:
GO:0003682
GO:
GO:0003723
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0008022
GO:
GO:0008022
GO:
GO:0008266
GO:
GO:0008266
GO:
GO:0008344
GO:
GO:0008542
GO:
GO:0016363
GO:
GO:0016363
GO:
GO:0034046
GO:
GO:0034046
GO:
GO:0042272
GO:
GO:0042272
GO:
GO:0042326
GO:
GO:0042405
GO:
GO:0042405
GO:
GO:0042802
GO:
GO:0042802
GO:
GO:0043231
GO:
GO:0043231
GO:
GO:0043569
GO:
GO:0043621
GO:
GO:0043621
GO:
GO:0045892
GO:
GO:0045892
GO:
GO:0045944
GO:
GO:0048286
GO:
GO:0051168
GO:
GO:0051168
GO:
GO:0060079
GO:
GO:0060252
MGI_trans_name:
Atxn1-203
goslim_goa:
GO:0003674
goslim_goa:
GO:0003723
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0006810
goslim_goa:
GO:0006913
goslim_goa:
GO:0007267
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0050877
UniParc:
UPI0000F4A96C
definition
note
: transcript_id=ENSMUST00000180110
protein_id
: ENSMUSP00000137439
translation
: MKSNQERSNECLPPKKREIPATSRPSEEKATALPSDNHCVEGVAWLPSTPGIRGHGGGRHGSAGTSGEHGLQGMGLHKALSAGLDYSPPSAPRSVPTANTLPTVYPPPQSGTPVSPVQYAHLSHTFQFIGSSQYSGPYAGFIPSQLISPSGNPVTSAVASAAGATTPSQRSQLEAYSTLLANMGSLSQAPGHKVEPPPQQHLSRAAGLVNPGSPPPPTQQNQYIHISSSPQSSGRATSPPPIPVHLHPHQTMIPHTLTLGPSSQVVVQYSDAGGHFVPRESTKKAESSRLQQAMQAKEVLNGEMEKSRRYGASSSVELSLGKASSKSVPHPYESRHVVVHPSPADYSSRDTSGVRGSVMVLPNSSTPSADLEAQQTTHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGGLPQHLVIPGNQPLLIPVGSPDMDTPGAASAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPTTASPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEESHSPGVAVIQFAVGEHRAQVTLTRVIQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTLKNLKNGSVKKGQPVDPASVLLKQAKTDSLAGSRHRYAEQENGINQGSAQVLSENGELKFPEKIGLPAAPFLSKIEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQEVKICIEGRSNVGK
name
Atxn1 (ENSMUSG00000046876)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26483.1
Uniprot/SWISSPROT:
P54254
RefSeq_peptide:
NP_033150
RefSeq_mRNA:
NM_009124.6
RefSeq_peptide_predicted:
XP_011242682.1
RefSeq_peptide_predicted:
XP_011242683.1
RefSeq_peptide_predicted:
XP_011242684.1
RefSeq_peptide_predicted:
XP_011242685.1
RefSeq_peptide_predicted:
XP_011242686.1
RefSeq_peptide_predicted:
XP_011242687.1
RefSeq_peptide_predicted:
XP_011242688.1
RefSeq_peptide_predicted:
XP_011242689.1
RefSeq_peptide_predicted:
XP_011242690.1
RefSeq_peptide_predicted:
XP_011242691.1
RefSeq_peptide_predicted:
XP_011242692.1
RefSeq_peptide_predicted:
XP_011242693.1
RefSeq_peptide_predicted:
XP_011242694.1
RefSeq_peptide_predicted:
XP_011242695.1
UCSC:uc011yyv.2
Fantom:
C130044L17
EMBL:
AK048268
EMBL:
BC058178
EMBL:
X83542
GO:
GO:0000122
GO:
GO:0003677
GO:
GO:0003682
GO:
GO:0003723
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0006351
GO:
GO:0008022
GO:
GO:0008266
GO:
GO:0008344
GO:
GO:0008542
GO:
GO:0016363
GO:
GO:0034046
GO:
GO:0042272
GO:
GO:0042326
GO:
GO:0042405
GO:
GO:0042802
GO:
GO:0043231
GO:
GO:0043569
GO:
GO:0043621
GO:
GO:0045892
GO:
GO:0045944
GO:
GO:0048286
GO:
GO:0051168
GO:
GO:0060079
GO:
GO:0060252
MGI_trans_name:
Atxn1-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0003723
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0006810
goslim_goa:
GO:0006913
goslim_goa:
GO:0007267
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0050877
protein_id:
AAH58178.1
protein_id:
BAC33290.1
protein_id:
CAA58533.1
UniParc:
UPI00000245B3
definition
note
: transcript_id=ENSMUST00000091628
protein_id
: ENSMUSP00000089217
translation
: MKSNQERSNECLPPKKREIPATSRPSEEKATALPSDNHCVEGVAWLPSTPGIRGHGGGRHGSAGTSGEHGLQGMGLHKALSAGLDYSPPSAPRSVPTANTLPTVYPPPQSGTPVSPVQYAHLSHTFQFIGSSQYSGPYAGFIPSQLISPSGNPVTSAVASAAGATTPSQRSQLEAYSTLLANMGSLSQAPGHKVEPPPQQHLSRAAGLVNPGSPPPPTQQNQYIHISSSPQSSGRATSPPPIPVHLHPHQTMIPHTLTLGPSSQVVVQYSDAGGHFVPRESTKKAESSRLQQAMQAKEVLNGEMEKSRRYGASSSVELSLGKASSKSVPHPYESRHVVVHPSPADYSSRDTSGVRGSVMVLPNSSTPSADLEAQQTTHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGGLPQHLVIPGNQPLLIPVGSPDMDTPGAASAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPTTASPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEESHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTLKNLKNGSVKKGQPVDPASVLLKQAKTDSLAGSRHRYAEQENGINQGSAQVLSENGELKFPEKIGLPAAPFLSKIEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQEVKICIEGRSNVGK
name
Atxn1 (ENSMUSG00000046876)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26483.1
Uniprot/SWISSPROT:
P54254
RefSeq_peptide:
NP_001186233
RefSeq_mRNA:
NM_001199304.1
RefSeq_peptide_predicted:
XP_011242682.1
RefSeq_peptide_predicted:
XP_011242683.1
RefSeq_peptide_predicted:
XP_011242684.1
RefSeq_peptide_predicted:
XP_011242685.1
RefSeq_peptide_predicted:
XP_011242686.1
RefSeq_peptide_predicted:
XP_011242687.1
RefSeq_peptide_predicted:
XP_011242688.1
RefSeq_peptide_predicted:
XP_011242689.1
RefSeq_peptide_predicted:
XP_011242690.1
RefSeq_peptide_predicted:
XP_011242691.1
RefSeq_peptide_predicted:
XP_011242692.1
RefSeq_peptide_predicted:
XP_011242693.1
RefSeq_peptide_predicted:
XP_011242694.1
RefSeq_peptide_predicted:
XP_011242695.1
UCSC:uc011yyx.2
Fantom:
C130044L17
EMBL:
AK048268
EMBL:
BC058178
EMBL:
X83542
GO:
GO:0000122
GO:
GO:0003677
GO:
GO:0003682
GO:
GO:0003723
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0006351
GO:
GO:0008022
GO:
GO:0008266
GO:
GO:0008344
GO:
GO:0008542
GO:
GO:0016363
GO:
GO:0034046
GO:
GO:0042272
GO:
GO:0042326
GO:
GO:0042405
GO:
GO:0042802
GO:
GO:0043231
GO:
GO:0043569
GO:
GO:0043621
GO:
GO:0045892
GO:
GO:0045944
GO:
GO:0048286
GO:
GO:0051168
GO:
GO:0060079
GO:
GO:0060252
MGI_trans_name:
Atxn1-202
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0003723
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0006810
goslim_goa:
GO:0006913
goslim_goa:
GO:0007267
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
goslim_goa:
GO:0050877
protein_id:
AAH58178.1
protein_id:
BAC33290.1
protein_id:
CAA58533.1
UniParc:
UPI00000245B3
definition
note
: transcript_id=ENSMUST00000167708
protein_id
: ENSMUSP00000129890
translation
: MKSNQERSNECLPPKKREIPATSRPSEEKATALPSDNHCVEGVAWLPSTPGIRGHGGGRHGSAGTSGEHGLQGMGLHKALSAGLDYSPPSAPRSVPTANTLPTVYPPPQSGTPVSPVQYAHLSHTFQFIGSSQYSGPYAGFIPSQLISPSGNPVTSAVASAAGATTPSQRSQLEAYSTLLANMGSLSQAPGHKVEPPPQQHLSRAAGLVNPGSPPPPTQQNQYIHISSSPQSSGRATSPPPIPVHLHPHQTMIPHTLTLGPSSQVVVQYSDAGGHFVPRESTKKAESSRLQQAMQAKEVLNGEMEKSRRYGASSSVELSLGKASSKSVPHPYESRHVVVHPSPADYSSRDTSGVRGSVMVLPNSSTPSADLEAQQTTHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGGLPQHLVIPGNQPLLIPVGSPDMDTPGAASAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPTTASPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEESHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTLKNLKNGSVKKGQPVDPASVLLKQAKTDSLAGSRHRYAEQENGINQGSAQVLSENGELKFPEKIGLPAAPFLSKIEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQEVKICIEGRSNVGK
name
type
misc_feature
link
xref
definition
note
: contig AC154817.2 1..105176(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.