VariantTable
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name
Bcat2 (ENSMUSG00000030826)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Bcat2
note
: branched chain aminotransferase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1276534]
name
Bcat2 (ENSMUSG00000030826)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000033098
name
Bcat2 (ENSMUSG00000030826)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000120864
name
Bcat2 (ENSMUSG00000030826)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000120296
name
Bcat2 (ENSMUSG00000030826)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000117366
name
Bcat2 (ENSMUSG00000030826)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000140077
name
Bcat2 (ENSMUSG00000030826)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS21252.1
Uniprot/SWISSPROT:
O35855
RefSeq_peptide:
NP_033867
RefSeq_mRNA:
NM_009737.3
Vega_transcript:
Bcat2-001
Vega_transcript:
OTTMUST00000075076
Uniprot/SPTREMBL:
Q3ULU3
UCSC:uc009gwd.2
Fantom:
G930041K17
EMBL:
AK145300
EMBL:
BC017688
EMBL:
BC048072
EMBL:
U68526
GO:
GO:0004084
GO:
GO:0005739
GO:
GO:0006549
GO:
GO:0006550
GO:
GO:0006551
GO:
GO:0006573
GO:
GO:0009081
GO:
GO:0009082
GO:
GO:0009083
GO:
GO:0010817
GO:
GO:0052654
GO:
GO:0052655
GO:
GO:0052656
MGI_trans_name:
Bcat2-001
Vega_translation:
201257
Vega_translation:
OTTMUSP00000039289
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0006520
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0009058
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
protein_id:
AAB67674.1
protein_id:
AAH17688.1
protein_id:
AAH48072.1
protein_id:
BAE26355.1
OTTP:
OTTMUSP00000039289
OTTT:
OTTMUST00000075076
Reactome:
R-MMU-1430728
Reactome:
R-MMU-70895
Reactome:
R-MMU-71291
UniParc:
UPI00000289BC
definition
note
: transcript_id=ENSMUST00000033098
protein_id
: ENSMUSP00000033098
translation
: MAAATLGQVWARKLLPVPWLLCGSKRCVSSIFKAADLQIQMTKEPQKKPAPSQALLFGKTFTDHMLMVEWNNKAGWGPPRIQPFQNLTLHPACSGLHYSLQLFEGLKAYKGGDQQVRLFRPWLNMDRMLRSARRLCLPDFDKQELLECIRQLIEVDKDWVPDGNGTSLYVRPVLIGNEPSLGVGMVTQALLYVILCPVGSYFPGDSMTPVSLLADPSFVRAWIGGVGDCKLGGNYGPTVAVQREAQKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDLARTWGEFRVAERKVTMKELKRALEEGRVREVFGSGTACQVCPVHQILYEGKQLHIPTMENGPELILRFQKELKAIQYGASAHDWMFRV
name
Bcat2 (ENSMUSG00000030826)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Bcat2-005
Vega_transcript:
OTTMUST00000075080
Uniprot/SPTREMBL:
D3Z7C8
UCSC:uc009gwd.2
EMBL:
AC151602
GO:
GO:0004084
GO:
GO:0005739
GO:
GO:0006549
GO:
GO:0006550
GO:
GO:0006551
GO:
GO:0006573
GO:
GO:0009081
GO:
GO:0009082
GO:
GO:0009083
GO:
GO:0010817
GO:
GO:0052654
GO:
GO:0052655
GO:
GO:0052656
MGI_trans_name:
Bcat2-005
Vega_translation:
201258
Vega_translation:
OTTMUSP00000039292
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0006520
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0009058
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
OTTP:
OTTMUSP00000039292
OTTT:
OTTMUST00000075080
UniParc:
UPI000164C3DC
definition
note
: transcript_id=ENSMUST00000120864
protein_id
: ENSMUSP00000113045
translation
: MAAATLGQVWARKLLPVPWLLCGSKRCVSSIFKAADLQIQMTKEPQKKPAPSQALLFGKTFTDHMLMVEWNNKAGWGPPRIQPFQNLTLHPACSGLHYSLQLFEGLKAYKGGDQQVRLFRPWLNMDRMLRSARRLCLPELLECIRQLIEVDKDWVPDGNGTSLYVRPVLIGNEPSLGVGMVTQALLYVILCPVGSYFPGDSMTPVSLLADPSFVRAWIGGVGDCKLGGNYGPTVAVQREAQKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDLARTWGEFRVAERKVTMKELKRALEEGRVREVFGSGTACQVCPVHQILYEGKQLHIPTMENGPELILRFQKELKAIQYGASAHDWMFRV
name
type
STS
link
xref
UniSTS_NUM:273132
UniSTS:PMC324540P1
definition
note
: map_weight=1
standard_name
: PMC324540P1
name
type
misc_feature
link
xref
definition
note
: contig AC151602.4 1..244014(-1)
name
Bcat2 (ENSMUSG00000030826)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000075077
Vega_transcript:
OTTMUST00000075077
MGI_trans_name:
Bcat2-002
OTTT:
OTTMUST00000075077
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000153219
name
Bcat2 (ENSMUSG00000030826)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000075082
Vega_transcript:
OTTMUST00000075082
MGI_trans_name:
Bcat2-007
OTTT:
OTTMUST00000075082
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000148275
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.