VariantTable
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name
Ptpdc1 (ENSMUSG00000038042)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Ptpdc1
note
: protein tyrosine phosphatase domain containing 1 [Source:MGI Symbol;Acc:MGI:2145430]
name
Ptpdc1 (ENSMUSG00000038042)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000035824
name
Ptpdc1 (ENSMUSG00000038042)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26495.1
Uniprot/SWISSPROT:
Q6NZK8
RefSeq_peptide:
NP_001288710.1
RefSeq_peptide:
NP_997115
RefSeq_mRNA:
NM_001301781.1
RefSeq_mRNA:
NM_207232.2
RefSeq_mRNA_predicted:
XM_006516922.2
RefSeq_peptide_predicted:
XP_006516985.1
UCSC:uc007qii.2
Fantom:
4922505P07
Fantom:
5330409L19
Fantom:
A230075N21
Fantom:
E130020P12
EMBL:
AK030415
EMBL:
AK038922
EMBL:
AK053480
EMBL:
AK132781
EMBL:
BC066081
EMBL:
BC068267
GO:
GO:0003674
GO:
GO:0004725
GO:
GO:0005654
GO:
GO:0007224
GO:
GO:0008138
GO:
GO:0035335
GO:
GO:0060271
MGI_trans_name:
Ptpdc1-201
goslim_goa:
GO:0000902
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0006464
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0016791
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
AAH66081.1
protein_id:
AAH68267.1
protein_id:
BAC35397.1
protein_id:
BAE20451.1
protein_id:
BAE20543.1
protein_id:
BAE21357.1
UniParc:
UPI000023B761
definition
note
: transcript_id=ENSMUST00000035824
protein_id
: ENSMUSP00000047374
translation
: MAAGVLPQNEDPYSTLVNSSGHAAHMDENSGRPAPKYTKVGERLRHVIPGHMACSMACGGRACKYENPARWSEQEQAIKGVYSSWVTDNILAMARPSSELLEKYRIIEQFLGQGIKTIINLQRPGEHASCGSALEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTAILDMVKVMTFALQEGKVAVHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLAPLRNIFSCCDPKAHAVTLAQYLIRQRHLLHGYEARLLKYVPKIIHLVCKLLLDLAENRPVVMKSMLEGPVLSAEIEKTVSEMVTLQLDQELLRQNSDVPDPFNPTAEVAEFENQDVILSTEQEFDPLWKRRDIECLQPLTHLKRQLSYSDSDLKRAKAILEQGETPWTVPAQELLDHSLQHQKPTSHCYMPPTPELGFNKEALVQNTFSFWTPSKCGGLEGLKDEGSLLLCRKDIPKEVQRSRTFSVGVSCSHNPGEPVPPNFTSIHKDPEQVTHCRCEAPGGWVPGPVHEMVRSPCSPLNCGSSPKAQFPHGQETQDSTDLSEAVPHAGLQPELSAEARRILAAKALANLNEFVEKEEVKRKVEMWQKELNSREEAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDRQADAAEALFLLEKGQYQTILCVLHCIVSLQTLPMEVEEACLLHAIKAFTKVNFDSENGPIVYDTLKKIFKHTLEEKRKMAKDSLS
name
type
misc_feature
link
xref
definition
note
: contig AC147162.2 42524..170563(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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show
B6N BAC end pairs :
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show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
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SWNv1 :
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CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.