VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
1110007C09Rik (ENSMUSG00000037960)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: 1110007C09Rik
note
: RIKEN cDNA 1110007C09 gene [Source:MGI Symbol;Acc:MGI:1915730]
name
1110007C09Rik (ENSMUSG00000037960)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000048946
name
1110007C09Rik (ENSMUSG00000037960)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS49260.1
Uniprot/SWISSPROT:
Q9D1I2
RefSeq_peptide:
NP_081014
RefSeq_mRNA:
NM_026738.2
Uniprot/SPTREMBL:
B2RV71
UCSC:uc007qiy.1
Fantom:
1110007C09
Fantom:
F630042E19
EMBL:
AK003526
EMBL:
AK154517
EMBL:
BC147073
EMBL:
BC147074
EMBL:
CH466546
GO:
GO:0003674
GO:
GO:0005789
GO:
GO:0008150
GO:
GO:0016021
GO:
GO:0031966
GO:
GO:0042981
MGI_trans_name:
1110007C09Rik-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0005783
goslim_goa:
GO:0008150
goslim_goa:
GO:0043226
protein_id:
AAI47074.1
protein_id:
AAI47075.1
protein_id:
BAB22838.1
protein_id:
BAE32646.1
protein_id:
EDL41065.1
UniParc:
UPI0000029B03
definition
note
: transcript_id=ENSMUST00000048946
protein_id
: ENSMUSP00000047569
translation
: MTDQTYCDRLVQDTPFLTGQGRLSEQQVDRIILQLNRYYPQILTNKEAEKFRNPKASLRVRLCDLLSHLQQRGERHCQEFYRALYIHAQPLHSHLPSRYSPQNSDCRELDWGIESRELSDRGPMSFLAGLGLAAGLALLLYCCPPDPKVLPGTRRVLAFSPVIIDRHVSRYLLAFLADDLGGL
name
type
misc_feature
link
xref
definition
note
: contig AC140284.3 45990..186444(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.