VariantTable
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name
Fgd3 (ENSMUSG00000037946)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Fgd3
note
: FYVE, RhoGEF and PH domain containing 3 [Source:MGI Symbol;Acc:MGI:1353657]
name
Fgd3 (ENSMUSG00000037946)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000110087
name
Fgd3 (ENSMUSG00000037946)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000048716
name
Fgd3 (ENSMUSG00000037946)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000110086
name
Fgd3 (ENSMUSG00000037946)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26499.1
RefSeq_peptide:
NP_056574
RefSeq_mRNA:
NM_015759.2
RefSeq_peptide_predicted:
XP_006516992.1
RefSeq_peptide_predicted:
XP_006516993.1
Vega_transcript:
Fgd3-001
Vega_transcript:
OTTMUST00000049566
Uniprot/SPTREMBL:
Q3TNB8
UCSC:uc007qjd.1
Fantom:
F520008F19
Fantom:
K0C0007N24
EMBL:
AC132245
EMBL:
AC140284
EMBL:
AK157835
EMBL:
AK165413
EMBL:
CH466546
GO:
GO:0005089
GO:
GO:0035023
GO:
GO:0043547
GO:
GO:0046872
MGI_trans_name:
Fgd3-001
Vega_translation:
214443
Vega_translation:
OTTMUSP00000022987
goslim_goa:
GO:0003674
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
protein_id:
BAE34218.1
protein_id:
BAE38171.1
protein_id:
EDL41073.1
OTTP:
OTTMUSP00000022987
OTTT:
OTTMUST00000049566
UniParc:
UPI0000026C8F
definition
note
: transcript_id=ENSMUST00000110087
protein_id
: ENSMUSP00000105714
translation
: MELGRSPSTPQEEAISPLGVLGTGPSSSPLGKLQALPIGPGAHRGAHSSSAPAGDSSTREPSGAMKIPNRDSGIDSPSSSVASENFPCEESSEGSPSPAILGLPSETASDSRVPQDNPQEEEDSGMGEEPDPKVTLFRPQEDVSLTQCSDPQKLLHIAQELLHTEEAYVKRLHLLDQVFCTKLTEAGIPLEVTTGIFSNISSIYRFHGQFLLPELQKRITEEWDTNPRLGDILQKLAPFLKMYGEYVKNFDRAMGLVSTWTQRSPQFKDVIHTIQKQEVCGNLTLQHHMLEPVQRVPRYELLLKDYLKRLPRDAPDRKDAERSLELISTAADHSNAAIRKMEKMHKLLEVYEQLGGEEDIVNPANELIKEGSIQKLSAKNGTTQDRHLFLFNNVMLYCVPKLRLMGQKLSVREKMDISDLQVQDIVKPNAACTFIITGRKRSLELQTRTEEEKKEWIQVIQATVEKHKQKSETFRAFGGACSQDEEPTLSPDQPVMSTSSVEPAGVADSNGGTPGIESRKSSSKTRRDKEKPGCKSCGETFNSITKRRYRCKLCGEVICRKCSEFKAENSKQSRVCRECFLEEPLVPPSPSSETPTELKQNAEKPPSVDPRPSLLCGTLNLSDDGTTWNEVWAAIPESDPQVLDLLAGSQAGRLLYSIPLSGCNITMPDPEEGLEAGCAWKLHQGSQTWWLSAPSTKLQQCWLKALGTAVHGDTAGDRPGASQPQAPAGTDTP
name
Fgd3 (ENSMUSG00000037946)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26499.1
RefSeq_mRNA_predicted:
XM_006516931.2
RefSeq_peptide_predicted:
XP_006516992.1
RefSeq_peptide_predicted:
XP_006516993.1
RefSeq_peptide_predicted:
XP_006516994.1
Vega_transcript:
Fgd3-002
Vega_transcript:
OTTMUST00000049567
Uniprot/SPTREMBL:
Q3TNB8
UCSC:uc007qjc.1
Fantom:
F520008F19
Fantom:
K0C0007N24
EMBL:
AC132245
EMBL:
AC140284
EMBL:
AK157835
EMBL:
AK165413
EMBL:
CH466546
GO:
GO:0005089
GO:
GO:0035023
GO:
GO:0043547
GO:
GO:0046872
MGI_trans_name:
Fgd3-002
Vega_translation:
214444
Vega_translation:
OTTMUSP00000022988
goslim_goa:
GO:0003674
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
protein_id:
BAE34218.1
protein_id:
BAE38171.1
protein_id:
EDL41073.1
OTTP:
OTTMUSP00000022988
OTTT:
OTTMUST00000049567
UniParc:
UPI0000026C8F
definition
note
: transcript_id=ENSMUST00000048716
protein_id
: ENSMUSP00000048692
translation
: MELGRSPSTPQEEAISPLGVLGTGPSSSPLGKLQALPIGPGAHRGAHSSSAPAGDSSTREPSGAMKIPNRDSGIDSPSSSVASENFPCEESSEGSPSPAILGLPSETASDSRVPQDNPQEEEDSGMGEEPDPKVTLFRPQEDVSLTQCSDPQKLLHIAQELLHTEEAYVKRLHLLDQVFCTKLTEAGIPLEVTTGIFSNISSIYRFHGQFLLPELQKRITEEWDTNPRLGDILQKLAPFLKMYGEYVKNFDRAMGLVSTWTQRSPQFKDVIHTIQKQEVCGNLTLQHHMLEPVQRVPRYELLLKDYLKRLPRDAPDRKDAERSLELISTAADHSNAAIRKMEKMHKLLEVYEQLGGEEDIVNPANELIKEGSIQKLSAKNGTTQDRHLFLFNNVMLYCVPKLRLMGQKLSVREKMDISDLQVQDIVKPNAACTFIITGRKRSLELQTRTEEEKKEWIQVIQATVEKHKQKSETFRAFGGACSQDEEPTLSPDQPVMSTSSVEPAGVADSNGGTPGIESRKSSSKTRRDKEKPGCKSCGETFNSITKRRYRCKLCGEVICRKCSEFKAENSKQSRVCRECFLEEPLVPPSPSSETPTELKQNAEKPPSVDPRPSLLCGTLNLSDDGTTWNEVWAAIPESDPQVLDLLAGSQAGRLLYSIPLSGCNITMPDPEEGLEAGCAWKLHQGSQTWWLSAPSTKLQQCWLKALGTAVHGDTAGDRPGASQPQAPAGTDTP
name
Fgd3 (ENSMUSG00000037946)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Fgd3-003
Vega_transcript:
OTTMUST00000049568
UCSC:uc007qje.1
MGI_trans_name:
Fgd3-003
Vega_translation:
214445
Vega_translation:
OTTMUSP00000022989
OTTP:
OTTMUSP00000022989
OTTT:
OTTMUST00000049568
UniParc:
UPI00000EAFB0
definition
note
: transcript_id=ENSMUST00000110086
protein_id
: ENSMUSP00000105713
translation
: MELGRSPSTPQEEAISPLGVLGTGPSSSPLGKLQALPIGPGAHRGAHSSSAPAGDSSTREPSGAMKIPNRDSGIDSPSSSVASENFPCEESSEGSPSPAILGLPSETASDSRVPQDNPQEEEDSGMGEEPDPKVTLFRPQEDVSLTQCSDPQKLLHIAQELLHTEEAYVKRLHLLDQVFCTKLTEAGIPLEVTTGIFSNISSIYRFHGQFLLPELQKRITEEWDTNPRLGDILQKLAPFLKMYGEYVKNFDRAMGLVSTWTQRSPQFKDVIHTIQKQEVCGNLTLQHHMLEPVQRVPRYELLLKDYLKRLPRDAPDRKDAERSLELISTAADHSNAAIRKMEKMHKLLEVYEQLGGEEDIVNPANELIKEGSIQKLSAKNGTTQDRHLFLFNNVMLYCVPKLRLMGQKLSVREKMDISDLQVQDIVKPNAACTFIITGRKRSLELQTRTEEEKKEWIQVIQATVEKHKQKSETFRAFGGACSQDEEPTLSPDQPVMSTSSVEPAGVADSNGGTPGVSDPHPGISRSERCLGR
name
type
misc_feature
link
xref
definition
note
: contig AC140284.3 45990..186444(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
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genetic markers
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RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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KJRv1 :
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SWNv1 :
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CHDv1 :
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NJLv1 :
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BLG2v1 :
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HMIv1 :
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BFMv1 :
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PGNv1 :
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Click to browse alignment view.