VariantTable
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name
Secisbp2 (ENSMUSG00000035139)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Secisbp2
note
: SECIS binding protein 2 [Source:MGI Symbol;Acc:MGI:1922670]
name
Secisbp2 (ENSMUSG00000035139)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000040117
name
Secisbp2 (ENSMUSG00000035139)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000110044
name
Secisbp2 (ENSMUSG00000035139)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS36665.1
RefSeq_peptide:
NP_001295377.1
RefSeq_peptide:
NP_083555
RefSeq_mRNA:
NM_001308448.1
RefSeq_mRNA:
NM_029279.1
Vega_transcript:
OTTMUST00000049571
Vega_transcript:
Secisbp2-001
Uniprot/SPTREMBL:
Q3U1C4
UCSC:uc007qml.1
Fantom:
F830007A19
EMBL:
AC126547
EMBL:
AK156076
EMBL:
BC125391
EMBL:
BC125393
EMBL:
CH466546
GO:
GO:0001514
GO:
GO:0003730
GO:
GO:0003730
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005739
GO:
GO:0021756
GO:
GO:0030529
GO:
GO:0035368
GO:
GO:0043021
GO:
GO:0044822
GO:
GO:0044822
GO:
GO:0048666
GO:
GO:2000623
MGI_trans_name:
Secisbp2-001
Vega_translation:
214457
Vega_translation:
OTTMUSP00000022992
goslim_goa:
GO:0003674
goslim_goa:
GO:0003723
goslim_goa:
GO:0003729
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0006412
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
AAI25392.1
protein_id:
AAI25394.1
protein_id:
BAE33574.1
protein_id:
EDL41104.1
OTTP:
OTTMUSP00000022992
OTTT:
OTTMUST00000049571
UniParc:
UPI00001C51DE
definition
note
: transcript_id=ENSMUST00000040117
protein_id
: ENSMUSP00000045740
translation
: MASERPREPDGEDSIKLSADVKPFVPKFAGLNVAWSESSETRVFPGCAATYYPFVQEPPAAEQKMYPEDMAFGAPTFPAQYVSSEIALHPFAYPTYTLESAQSVCSVPTLQYDYSQARCHPGFRTAKPRHEHVCPPPQEAKGVFKKKPSDERRACEEQKSSSRRADNAVPCEARPARGSSHLSSRTESSLKSDGYHKRPDRKSRILAKSASTSKPEFEFSRLDFPELQSPKNSNMPETQKPPRWGPLGPAASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVTSNATTSSPSCTQELSWTPMGYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVTSEALSSNPSYNREKRVYPAPKAKASQGGELEQNESSKKNKKKKEKSKPSYEVLTVQEPPRIEDAEEFPNLSVASERRHRGQSPKLHSKQQTQNEFKTSGKKSQVPVQLDLGGMLAALEKQQQQQHASHAKPSSRPVVFSVGAVPVLSKDASSSERGRRSSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERMQQRLQESAVSLTVASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQPAPDSATFPKIHSRRFRDYCSQMLSKEVDACVTGLLKELVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLRKLKCIIISPNCEKTQSKGGLDDTLHTIIDCACEQNIPFVFALNRKALGRSLNKAVPVSIVGIFSYDGAQDQFHKMVELTMAARQAYKTMLETMRQEQAGEPGPQSPPSPPMQDPIPSTEEGTLPSTGEEPHYIEIWKKHLEAYSQRALELEDSLEASTSQMMNLNL
name
Secisbp2 (ENSMUSG00000035139)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000049572
Vega_transcript:
Secisbp2-002
Uniprot/SPTREMBL:
Q8BYU9
UCSC:uc007qmj.1
Fantom:
A130069J03
EMBL:
AC126547
EMBL:
AK037988
GO:
GO:0001514
GO:
GO:0003730
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005739
GO:
GO:0021756
GO:
GO:0030529
GO:
GO:0035368
GO:
GO:0043021
GO:
GO:0044822
GO:
GO:0048666
GO:
GO:2000623
MGI_trans_name:
Secisbp2-002
Vega_translation:
214458
Vega_translation:
OTTMUSP00000022993
goslim_goa:
GO:0003674
goslim_goa:
GO:0003723
goslim_goa:
GO:0003729
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0006412
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
BAC29914.1
OTTP:
OTTMUSP00000022993
OTTT:
OTTMUST00000049572
UniParc:
UPI00000EA4D6
definition
note
: transcript_id=ENSMUST00000110044
protein_id
: ENSMUSP00000105671
translation
: MASERPREPDGEDSIKLSADVKPFVPKFAGLNVAWSESSETRVFPGCAATYYPFVQEPPAAEQKMYPEDMAFGAPTFPAQYVSSEIALHPFAYPTYTLESAQSVCSVPTLQYDYSQARCHPGFRTAKPRHEHVCPPPQEAKGVFKKKPSDERRACEEQKSSSRRADNAVPCEARPARGSSHLSSRTESSLKSDGYHKRPDRKSRILAKSASTSKPEFEFSRLDFPELQSPKNSNMPETQKPPRWGPLGPAASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVTSNATTSSPSCTQELSWTPMGYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVTSEALSSNPSYNREKRVYPAPKVCVKDPRSRMGSGCSGKNCNSALGRLIQEDCKSKAILGHIVNPCLKIKAIR
name
type
misc_feature
link
xref
definition
note
: contig AC126547.4 30663..181823(1)
name
Secisbp2 (ENSMUSG00000035139)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000049573
Vega_transcript:
OTTMUST00000049573
MGI_trans_name:
Secisbp2-003
OTTT:
OTTMUST00000049573
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000154202
name
Secisbp2 (ENSMUSG00000035139)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000049574
Vega_transcript:
OTTMUST00000049574
MGI_trans_name:
Secisbp2-004
OTTT:
OTTMUST00000049574
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000127360
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.