VariantTable
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BAC clone ordering.
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name
Msx2 (ENSMUSG00000021469)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Msx2
note
: msh homeobox 2 [Source:MGI Symbol;Acc:MGI:97169]
name
Msx2 (ENSMUSG00000021469)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000021922
name
Msx2 (ENSMUSG00000021469)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26522.1
Uniprot/SWISSPROT:
Q03358
RefSeq_peptide:
NP_038629
RefSeq_mRNA:
NM_013601.2
Vega_transcript:
Msx2-001
Vega_transcript:
OTTMUST00000049518
Uniprot/SPTREMBL:
Q3UZH5
UCSC:uc007qnw.1
Fantom:
2610005L04
Fantom:
5730447C22
EMBL:
AK131974
EMBL:
AK133846
EMBL:
BC141132
EMBL:
L11738
EMBL:
L11739
EMBL:
M38576
EMBL:
S60460
EMBL:
S60698
EMBL:
X59252
GO:
GO:0000122
GO:
GO:0000977
GO:
GO:0000978
GO:
GO:0000982
GO:
GO:0000989
GO:
GO:0001227
GO:
GO:0001503
GO:
GO:0001649
GO:
GO:0002063
GO:
GO:0002076
GO:
GO:0002076
GO:
GO:0003148
GO:
GO:0003151
GO:
GO:0003198
GO:
GO:0003416
GO:
GO:0003677
GO:
GO:0003712
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0006366
GO:
GO:0008134
GO:
GO:0008285
GO:
GO:0009952
GO:
GO:0023019
GO:
GO:0030326
GO:
GO:0030509
GO:
GO:0030513
GO:
GO:0032792
GO:
GO:0035115
GO:
GO:0035116
GO:
GO:0035313
GO:
GO:0035880
GO:
GO:0042060
GO:
GO:0042476
GO:
GO:0042733
GO:
GO:0042981
GO:
GO:0043065
GO:
GO:0043066
GO:
GO:0043565
GO:
GO:0044212
GO:
GO:0045599
GO:
GO:0045617
GO:
GO:0045669
GO:
GO:0045892
GO:
GO:0048863
GO:
GO:0051216
GO:
GO:0051216
GO:
GO:0051795
GO:
GO:0060346
GO:
GO:0060349
GO:
GO:0060364
GO:
GO:0060444
GO:
GO:0061180
GO:
GO:0061312
GO:
GO:0070166
GO:
GO:0071363
GO:
GO:0071392
GO:
GO:0090427
GO:
GO:2000678
GO:
GO:2001055
MGI_trans_name:
Msx2-001
Vega_translation:
214476
Vega_translation:
OTTMUSP00000022961
goslim_goa:
GO:0000902
goslim_goa:
GO:0000988
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0006950
goslim_goa:
GO:0007165
goslim_goa:
GO:0008134
goslim_goa:
GO:0008150
goslim_goa:
GO:0009790
goslim_goa:
GO:0030154
goslim_goa:
GO:0040007
goslim_goa:
GO:0040011
goslim_goa:
GO:0043226
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
goslim_goa:
GO:0048870
protein_id:
AAA03477.1
protein_id:
AAA37824.1
protein_id:
AAC60657.2
protein_id:
AAI41133.1
protein_id:
BAE20914.1
protein_id:
BAE21882.1
protein_id:
CAA41945.1
OTTP:
OTTMUSP00000022961
OTTT:
OTTMUST00000049518
UniParc:
UPI0000021C03
definition
note
: transcript_id=ENSMUST00000021922
protein_id
: ENSMUSP00000021922
translation
: MASPTKGGDLFSSDEEGPAVLAGPGPGPGGAEGSAEERRVKVSSLPFSVEALMSDKKPPKESPAVPPDCASAGAVLRPLLLPGHGVRDAHSPGPLVKPFETASVKSENSEDGAPWIQEPGRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSGFSLPFPINSPLQAASIYGASYPFHRPVLPIPPVGLYATPVGYGMYHLS
name
type
misc_feature
link
xref
definition
note
: contig AC159201.2 1..148234(-1)
name
Msx2 (ENSMUSG00000021469)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000120114
Vega_transcript:
OTTMUST00000120114
MGI_trans_name:
Msx2-002
OTTT:
OTTMUST00000120114
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000188606
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.