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name
4833439L19Rik (ENSMUSG00000025871)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: 4833439L19Rik
note
: RIKEN cDNA 4833439L19 gene [Source:MGI Symbol;Acc:MGI:1921162]
name
4833439L19Rik (ENSMUSG00000025871)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000026989
name
4833439L19Rik (ENSMUSG00000025871)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000153065
name
4833439L19Rik (ENSMUSG00000025871)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000143144
name
4833439L19Rik (ENSMUSG00000025871)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26529.1
Uniprot/SWISSPROT:
Q9DBN4
RefSeq_peptide:
NP_598558
RefSeq_mRNA:
NM_133797.4
RefSeq_mRNA_predicted:
XM_006517478
RefSeq_peptide_predicted:
XP_006517541.1
Vega_transcript:
OTTMUST00000081236
Vega_transcript:
RP23-452K4.2-001
UCSC:uc007qof.3
Fantom:
1300002B20
Fantom:
4732438K03
Fantom:
4833439L19
Fantom:
4930558H15
Fantom:
G830027I08
Fantom:
I420039I05
Fantom:
I530025E03
Fantom:
I920194N11
Clone_based_vega_transcript:RP23-452K4.2-001
EMBL:
AK004845
EMBL:
AK014792
EMBL:
AK016176
EMBL:
AK028697
EMBL:
AK145025
EMBL:
AK159945
EMBL:
AK167616
EMBL:
AK169399
EMBL:
AK173126
EMBL:
BC033445
EMBL:
BC039775
EMBL:
BC043040
EMBL:
BC054417
GO:
GO:0003674
GO:
GO:0005737
GO:
GO:0008150
GO:
GO:0016491
GO:
GO:0055114
MGI_trans_name:
4833439L19Rik-001
Vega_translation:
214484
Vega_translation:
OTTMUSP00000043419
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0008150
goslim_goa:
GO:0016491
protein_id:
AAH33445.1
protein_id:
AAH39775.1
protein_id:
AAH43040.1
protein_id:
AAH54417.1
protein_id:
BAB23611.1
protein_id:
BAB30137.1
protein_id:
BAC25449.1
protein_id:
BAC26072.1
protein_id:
BAD32404.1
protein_id:
BAE26191.1
protein_id:
BAE35501.1
protein_id:
BAE39669.1
protein_id:
BAE41145.1
OTTP:
OTTMUSP00000043419
OTTT:
OTTMUST00000081236
UniParc:
UPI000000B2D7
definition
note
: transcript_id=ENSMUST00000026989
protein_id
: ENSMUSP00000026989
translation
: MASRQPEVPALAPSGPLGKMSLPIGMCRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQHLDKTEEGAASVSSLAVTPSPATDSSDKAPVVKAKATHVIMSSLITKQTQESIQRFEQQAGLRDAGYTPHKGLTTEETKYLRVAEALHKLKLQSGETAKEEKHPASAQSTPSSTPHASPKQKSRGWFPSGSSTALPAPNPHTMDPGSGNDRNSADKWSLFGPRPLQKSDSGFAIQAYKGAPRPSPMEVMRAQATRVGEDPATFKPPKMDVPMVEGKKQPLRTHNLKPRDLNVLTPTGF
name
4833439L19Rik (ENSMUSG00000025871)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS56882.1
RefSeq_peptide:
NP_001239574
RefSeq_peptide:
NP_001239575
RefSeq_mRNA:
NM_001252645.1
RefSeq_mRNA:
NM_001252646.1
Vega_transcript:
OTTMUST00000081237
Vega_transcript:
RP23-452K4.2-002
Uniprot/SPTREMBL:
D3Z1F7
UCSC:uc029sbj.1
Clone_based_vega_transcript:RP23-452K4.2-002
EMBL:
AC155262
EMBL:
CH466546
GO:
GO:0003674
GO:
GO:0008150
MGI_trans_name:
4833439L19Rik-002
Vega_translation:
214485
Vega_translation:
OTTMUSP00000043420
goslim_goa:
GO:0003674
goslim_goa:
GO:0008150
protein_id:
EDL41141.1
OTTP:
OTTMUSP00000043420
OTTT:
OTTMUST00000081237
UniParc:
UPI00001E82A1
definition
note
: transcript_id=ENSMUST00000153065
protein_id
: ENSMUSP00000119874
translation
: MSLPIGMCRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQHLDKTEEGAASVSSLAVTPSPATDSSDKAPVVKAKATHVIMSSLITKQTQESIQRFEQQAGLRDAGYTPHKGLTTEETKYLRVAEALHKLKLQSGETAKEEKHPASAQSTPSSTPHASPKQKSRGWFPSGSSTALPAPNPHTMDPGSGNDRNSADKWSLFGPRPLQKSDSGFAIQAYKGAPRPSPMEVMRAQATRVGEDPATFKPPKMDVPMVEGKKQPLRTHNLKPRDLNVLTPTGF
name
4833439L19Rik (ENSMUSG00000025871)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000081239
Vega_transcript:
RP23-452K4.2-004
Uniprot/SPTREMBL:
D3YXF2
UCSC:uc007qof.3
Clone_based_vega_transcript:RP23-452K4.2-004
EMBL:
AC155262
GO:
GO:0003674
GO:
GO:0008150
MGI_trans_name:
4833439L19Rik-004
Vega_translation:
214486
Vega_translation:
OTTMUSP00000043421
goslim_goa:
GO:0003674
goslim_goa:
GO:0008150
OTTP:
OTTMUSP00000043421
OTTT:
OTTMUST00000081239
UniParc:
UPI0001889CE4
definition
note
: transcript_id=ENSMUST00000143144
protein_id
: ENSMUSP00000120615
translation
: MASRQPEVPALAPSGPLGKMSLPIGMCRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQHLDKTEEGAASVSSLAVTPSPATDSSDKAPVVKAKATHVIMSSLITKQTQESIQRFEQQAGLRDAGYT
name
type
misc_feature
link
xref
definition
note
: contig AC155262.2 75073..168429(1)
name
4833439L19Rik (ENSMUSG00000025871)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000081238
Vega_transcript:
OTTMUST00000081238
UCSC:uc007qoi.3
Clone_based_vega_transcript:RP23-452K4.2-003
MGI_trans_name:
4833439L19Rik-003
OTTT:
OTTMUST00000081238
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000153708
name
4833439L19Rik (ENSMUSG00000025871)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000081318
Vega_transcript:
OTTMUST00000081318
Clone_based_vega_transcript:RP23-452K4.2-008
MGI_trans_name:
4833439L19Rik-008
OTTT:
OTTMUST00000081318
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000143173
name
4833439L19Rik (ENSMUSG00000025871)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000081317
Vega_transcript:
OTTMUST00000081317
Clone_based_vega_transcript:RP23-452K4.2-007
MGI_trans_name:
4833439L19Rik-007
OTTT:
OTTMUST00000081317
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000150938
Location
chromosome :
1
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3
4
5
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11
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19
X
(Build: mm10)
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Annotation:
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RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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KJRv1 :
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SWNv1 :
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CHDv1 :
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NJLv1 :
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BLG2v1 :
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HMIv1 :
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BFMv1 :
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PGNv1 :
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Click to browse alignment view.