VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Arl10 (ENSMUSG00000025870)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Arl10
note
: ADP-ribosylation factor-like 10 [Source:MGI Symbol;Acc:MGI:1930788]
name
Arl10 (ENSMUSG00000025870)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000026988
name
Arl10 (ENSMUSG00000025870)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000156024
name
Arl10 (ENSMUSG00000025870)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26530.1
Uniprot/SWISSPROT:
Q9QXJ4
RefSeq_peptide:
NP_064352
RefSeq_mRNA:
NM_019968.2
Vega_transcript:
Arl10-001
Vega_transcript:
OTTMUST00000081332
UCSC:uc007qoj.2
EMBL:
AC155262
EMBL:
AF205936
EMBL:
BC115498
EMBL:
BK001711
EMBL:
CH466546
GO:
GO:0005525
GO:
GO:0005575
GO:
GO:0005622
GO:
GO:0007264
GO:
GO:0008150
MGI_trans_name:
Arl10-001
Vega_translation:
214489
Vega_translation:
OTTMUSP00000043493
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
protein_id:
AAF20926.1
protein_id:
AAI15499.1
protein_id:
DAA02253.1
protein_id:
EDL41145.1
OTTP:
OTTMUSP00000043493
OTTT:
OTTMUST00000081332
UniParc:
UPI0000022716
definition
note
: transcript_id=ENSMUST00000026988
protein_id
: ENSMUSP00000026988
translation
: MAPRPLGPLVLALGGAAAVLGSVLFILWKAYFGRGRERRWDRGEAWWGADTARLPQWDEWEPEDEEDEPALEELEQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGGSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDPDLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFLLAASIAPAGSGFGEPGTVHIWKLLLQLLS
name
Arl10 (ENSMUSG00000025870)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide_predicted:
XP_006517369.1
Vega_transcript:
Arl10-002
Vega_transcript:
OTTMUST00000081333
Uniprot/SPTREMBL:
D3Z4X7
UCSC:uc007qoj.2
EMBL:
AC155262
GO:
GO:0005525
GO:
GO:0005575
GO:
GO:0005622
GO:
GO:0007264
GO:
GO:0008150
MGI_trans_name:
Arl10-002
Vega_translation:
214490
Vega_translation:
OTTMUSP00000043494
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
OTTP:
OTTMUSP00000043494
OTTT:
OTTMUST00000081333
UniParc:
UPI0000F4A9ED
definition
note
: transcript_id=ENSMUST00000156024
protein_id
: ENSMUSP00000116506
translation
: MAPRPLGPLVLALGGAAAVLGSVLFILWKAYFGRGRERRWDRGEAWWGADTARLPQWDEWEPEDEEDEPALEELEQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGGSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDPDLPVVIVANKQVSAMGGEPVGLLTDAW
name
type
misc_feature
link
xref
definition
note
: contig AC155262.2 75073..168429(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.