VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Gprin1 (ENSMUSG00000069227)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Gprin1
note
: G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
name
Gprin1 (ENSMUSG00000069227)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000135343
name
Gprin1 (ENSMUSG00000069227)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000099506
name
Gprin1 (ENSMUSG00000069227)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26534.1
Uniprot/SWISSPROT:
Q3UNH4
RefSeq_mRNA_predicted:
XM_006517256.2
RefSeq_peptide_predicted:
XP_006517319.1
Vega_transcript:
Gprin1-001
Vega_transcript:
OTTMUST00000081260
UCSC:uc007qpb.1
Fantom:
A230062C06
Fantom:
G430115C11
EMBL:
AF146569
EMBL:
AK138306
EMBL:
AK144210
EMBL:
BC057044
GO:
GO:0005886
GO:
GO:0030426
GO:
GO:0031175
GO:
GO:0051219
MGI_trans_name:
Gprin1-001
Vega_translation:
214520
Vega_translation:
OTTMUSP00000043436
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0048856
protein_id:
AAD55371.1
protein_id:
AAH57044.1
protein_id:
BAE23617.1
protein_id:
BAE25773.1
OTTP:
OTTMUSP00000043436
OTTT:
OTTMUST00000081260
UniParc:
UPI00001CDE60
definition
note
: transcript_id=ENSMUST00000135343
protein_id
: ENSMUSP00000115539
translation
: MRDCCSSPKAIPAPPRHALDQSLGMDPRHTSSSGAAEGASCSERPAGSLACPSPNCSPLPETPRAHGALTSDNSGTTLFGKPEPMSSAEATPTASEIRNPVFSGKMDGNSLKQADSTSTRKEEAGSLRNEESMLKGKAEPMIYGKGEPGTVGRVDCTASGAENSGSLGKVDMPCSSKVDIVSPGGDNAGSLRKVETISSGKMDPKTENVMHSRRERPGSTGEGDLVSLRENDMKPPDNTDSASTKKTDPEFSGKLTPGSSGKTELVSSVTVAPVTSENVNPVCSGGAGPAAVGNSETLSSVKKDPQLLGKKEAVSSGEGGSVSVRMAETVSARQPEGMFPAKTDSTSSNSTGPSGRADPVSLRNSELVSPVKPERLSSGQAERVSLVKTETLSSGKEDPRSSRRVDHTTVTGNMQTSQKGNPESSGKTDLGSSSSGDTRSLGTWGSLSAAKAEVTEGKGDPQPWKKASLPASEKTDPLASSKAGSASQGKAETVSPGEVDAMTLGKTVPTSSGKTALVSPGKVDLMTSERAEGIPELQASEKGNPVNSTRVDTGATGSTEPKSGVKVITQIPGATSPGKVETPSLQKEQPQLSEKTDPSRKVDPPTTVEPVSLGKADSASPSPRKAESQTSAKTVPQAPDKATSSLRQSDGTPYSSAQPQRDTRSIGSLPEREPSASTSQKDLAAAAAQKSPSAEAAAPPPGPRTRDNFTKAPSWDAGAPPPREDAGTQAGAQACVSVAVSPMSPQDGAGGPAFSFQAAPRAPSPAPRPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAVPPVFPEVRVRPGSVLAAALAPQEATEPVRDVSWDEKGMTWEVYGASMEVEVLGMAIQKHLERQIEEHGRQGAPAPAPPPAVRAGPGRAGSVRTAPAEGAAKRPPGLFRALLQSVRRPRCCSRAGPTAE
name
Gprin1 (ENSMUSG00000069227)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26534.1
Uniprot/SWISSPROT:
Q3UNH4
RefSeq_peptide:
NP_036144
RefSeq_mRNA:
NM_012014.3
Vega_transcript:
Gprin1-002
Vega_transcript:
OTTMUST00000081261
UCSC:uc007qpa.1
Fantom:
A230062C06
Fantom:
G430115C11
EMBL:
AF146569
EMBL:
AK138306
EMBL:
AK144210
EMBL:
BC057044
GO:
GO:0005886
GO:
GO:0030426
GO:
GO:0031175
GO:
GO:0051219
MGI_trans_name:
Gprin1-002
Vega_translation:
214521
Vega_translation:
OTTMUSP00000043437
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0048856
protein_id:
AAD55371.1
protein_id:
AAH57044.1
protein_id:
BAE23617.1
protein_id:
BAE25773.1
OTTP:
OTTMUSP00000043437
OTTT:
OTTMUST00000081261
UniParc:
UPI00001CDE60
definition
note
: transcript_id=ENSMUST00000099506
protein_id
: ENSMUSP00000097106
translation
: MRDCCSSPKAIPAPPRHALDQSLGMDPRHTSSSGAAEGASCSERPAGSLACPSPNCSPLPETPRAHGALTSDNSGTTLFGKPEPMSSAEATPTASEIRNPVFSGKMDGNSLKQADSTSTRKEEAGSLRNEESMLKGKAEPMIYGKGEPGTVGRVDCTASGAENSGSLGKVDMPCSSKVDIVSPGGDNAGSLRKVETISSGKMDPKTENVMHSRRERPGSTGEGDLVSLRENDMKPPDNTDSASTKKTDPEFSGKLTPGSSGKTELVSSVTVAPVTSENVNPVCSGGAGPAAVGNSETLSSVKKDPQLLGKKEAVSSGEGGSVSVRMAETVSARQPEGMFPAKTDSTSSNSTGPSGRADPVSLRNSELVSPVKPERLSSGQAERVSLVKTETLSSGKEDPRSSRRVDHTTVTGNMQTSQKGNPESSGKTDLGSSSSGDTRSLGTWGSLSAAKAEVTEGKGDPQPWKKASLPASEKTDPLASSKAGSASQGKAETVSPGEVDAMTLGKTVPTSSGKTALVSPGKVDLMTSERAEGIPELQASEKGNPVNSTRVDTGATGSTEPKSGVKVITQIPGATSPGKVETPSLQKEQPQLSEKTDPSRKVDPPTTVEPVSLGKADSASPSPRKAESQTSAKTVPQAPDKATSSLRQSDGTPYSSAQPQRDTRSIGSLPEREPSASTSQKDLAAAAAQKSPSAEAAAPPPGPRTRDNFTKAPSWDAGAPPPREDAGTQAGAQACVSVAVSPMSPQDGAGGPAFSFQAAPRAPSPAPRPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAVPPVFPEVRVRPGSVLAAALAPQEATEPVRDVSWDEKGMTWEVYGASMEVEVLGMAIQKHLERQIEEHGRQGAPAPAPPPAVRAGPGRAGSVRTAPAEGAAKRPPGLFRALLQSVRRPRCCSRAGPTAE
name
type
misc_feature
link
xref
definition
note
: contig AC162526.3 61529..219418(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.