VariantTable
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BAC clone ordering.
cursor point :
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On read coverage region : Click to browse alignment view.
name
Sh3rf1 (ENSMUSG00000031642)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Sh3rf1
note
: SH3 domain containing ring finger 1 [Source:MGI Symbol;Acc:MGI:1913066]
name
Sh3rf1 (ENSMUSG00000031642)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000034060
name
Sh3rf1 (ENSMUSG00000031642)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS40348.1
RefSeq_peptide:
NP_067481
RefSeq_mRNA:
NM_021506.2
RefSeq_peptide_predicted:
XP_011240533.1
Uniprot/SPTREMBL:
E9QQ33
UCSC:uc009ltx.1
EMBL:
AC117196
EMBL:
AC134339
GO:
GO:0005515
GO:
GO:0005829
GO:
GO:0005829
GO:
GO:0008270
GO:
GO:0043066
GO:
GO:0043066
GO:
GO:0043154
GO:
GO:0043154
GO:
GO:0046328
GO:
GO:2001237
GO:
GO:2001237
MGI_trans_name:
Sh3rf1-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005829
goslim_goa:
GO:0008150
goslim_goa:
GO:0008219
goslim_goa:
GO:0043167
Reactome:
R-MMU-1280218
Reactome:
R-MMU-168256
Reactome:
R-MMU-983168
Reactome:
R-MMU-983169
UniParc:
UPI000019326F
definition
note
: transcript_id=ENSMUST00000034060
protein_id
: ENSMUSP00000034060
translation
: MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVDELPSNILLVRLLDGIKQRPWKPGPGGGGGTTCTNTLRAQGSTVVNCGSKDLQSSQCGQQPRVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVSGVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNSAAKQLIEWDKPPVPGVDTAECPSATAQSTSASKHPDTKKNTRKRHSFTSLTMANKSSQGSQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHISTTGLIVTPPPSSPVTTGPAFTFPSDVPYQAALGSMNPPLPPPPLLAATVLASTPSGATAAVAAAAAAAAAGMGPRPVMGSSEQIAHLRPQTRPSVYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWYKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVSMSTAGQASRGVTMVSPSTAGGPTQKPQGNGVAGNPSVVPTAVVSAAHIQTSPQAKVLLHMSGQMTVNQARNAVRTVAAHSQERPTAAVTPIQVQNAACLGPASVGLPHHSLASQPLPPMAGPAAHGAAVSISRTNAPMACAAGASLASPNMTSAVLETEPSGRTVTILPGLPTSPESAASACGNSSAGKPDKDSKKEKKGLLKLLSGASTKRKPRVSPPASPTLDVELGAGEAPLQGAVGPELPLGGSHGRVGSCPTDGDGPVAAGTAALAQDAFHRKTSSLDSAVPIAPPPRQACSSLGPVMNEARPVVCERHRVVVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
name
type
misc_feature
link
xref
definition
note
: contig AC117196.3 7..185947(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.