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name
Cd8a (ENSMUSG00000053977)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Cd8a
note
: CD8 antigen, alpha chain [Source:MGI Symbol;Acc:MGI:88346]
name
Cd8a (ENSMUSG00000053977)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000066747
name
Cd8a (ENSMUSG00000053977)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000172321
name
Cd8a (ENSMUSG00000053977)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS39507.1
Uniprot/SWISSPROT:
P01731
RefSeq_peptide:
NP_001074579
RefSeq_mRNA:
NM_001081110.2
RefSeq_mRNA_predicted:
XM_006505464
RefSeq_peptide_predicted:
XP_006505527.1
Vega_transcript:
Cd8a-001
Vega_transcript:
OTTMUST00000142196
UCSC:uc009cgr.1
EMBL:
M12052
EMBL:
M12819
EMBL:
M12825
EMBL:
M12975
EMBL:
M12976
EMBL:
M12977
EMBL:
M16981
EMBL:
M22064
EMBL:
Y00157
GO:
GO:0002456
GO:
GO:0005515
GO:
GO:0007166
GO:
GO:0009897
GO:
GO:0009897
GO:
GO:0009986
GO:
GO:0016021
GO:
GO:0019901
GO:
GO:0042110
GO:
GO:0042803
GO:
GO:0045065
GO:
GO:0050850
GO:
GO:0051607
MGI_trans_name:
Cd8a-001
PDB:
1BQH
PDB:
1NEZ
PDB:
2ARJ
PDB:
2ATP
PDB:
3B9K
PDB:
3DMM
Vega_translation:
197768
Vega_translation:
OTTMUSP00000074222
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006950
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0048856
protein_id:
AAA39475.1
protein_id:
AAA39476.1
protein_id:
AAA39477.1
protein_id:
AAA39478.1
protein_id:
AAA39665.1
protein_id:
CAA68352.2
OTTP:
OTTMUSP00000074222
OTTT:
OTTMUST00000142196
Reactome:
R-MMU-1280218
Reactome:
R-MMU-168256
Reactome:
R-MMU-198933
UniParc:
UPI00000270C4
definition
note
: transcript_id=ENSMUST00000066747
protein_id
: ENSMUSP00000068123
translation
: MASPLTRFLSLNLLLLGESIILGSGEAKPQAPELRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYVLTLNKFSKENEGYYFCSVISNSVMYFSSVVPVLQKVNSTTTKPVLRTPSPVHPTGTSQPQRPEDCRPRGSVKGTGLDFACDIYIWAPLAGICVALLLSLIITLICYHRSRKRVCKCPRPLVRQEGKPRPSEKIV
name
Cd8a (ENSMUSG00000053977)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS51806.1
RefSeq_peptide:
NP_033987
RefSeq_mRNA:
NM_009857.1
RefSeq_mRNA_predicted:
XM_006505465
RefSeq_peptide_predicted:
XP_006505528.1
Vega_transcript:
Cd8a-003
Vega_transcript:
OTTMUST00000142198
Uniprot/SPTREMBL:
Q8CAX3
UCSC:uc009cgs.1
Fantom:
A130020I07
EMBL:
AC160090
EMBL:
AK037467
EMBL:
CH466523
GO:
GO:0002456
GO:
GO:0007166
GO:
GO:0009897
GO:
GO:0009986
GO:
GO:0042803
GO:
GO:0045065
GO:
GO:0050850
GO:
GO:0051607
MGI_trans_name:
Cd8a-003
Vega_translation:
197769
Vega_translation:
OTTMUSP00000074223
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0006950
goslim_goa:
GO:0007155
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0048856
protein_id:
BAC29812.1
protein_id:
EDK98938.1
OTTP:
OTTMUSP00000074223
OTTT:
OTTMUST00000142198
UniParc:
UPI00000E957D
definition
note
: transcript_id=ENSMUST00000172321
protein_id
: ENSMUSP00000131873
translation
: MASPLTRFLSLNLLLLGESIILGSGEAKPQAPELRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYVLTLNKFSKENEGYYFCSVISNSVMYFSSVVPVLQKVNSTTTKPVLRTPSPVHPTGTSQPQRPEDCRPRGSVKGTGLDFACDIYIWAPLAGICVALLLSLIITLICYHSR
name
type
misc_feature
link
xref
definition
note
: contig AC160090.4 1..190344(-1)
name
Cd8a (ENSMUSG00000053977)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000142197
Vega_transcript:
OTTMUST00000142197
MGI_trans_name:
Cd8a-002
OTTT:
OTTMUST00000142197
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000205054
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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show
Gene, mRNA, CDS :
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show
MSM BAC end pairs :
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show
B6N BAC end pairs :
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show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.