VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Defb18 (ENSMUSG00000073735)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Defb18
note
: defensin beta 18 [Source:MGI Symbol;Acc:MGI:3648148]
name
Defb18 (ENSMUSG00000073735)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000097818
name
Defb18 (ENSMUSG00000073735)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35520.1
Uniprot/SWISSPROT:
Q30KP5
RefSeq_peptide:
NP_001034212
RefSeq_mRNA:
NM_001039123.1
Vega_transcript:
Defb18-001
Vega_transcript:
OTTMUST00000049517
UCSC:uc007akm.1
EMBL:
DQ012029
GO:
GO:0003674
GO:
GO:0005575
GO:
GO:0005576
GO:
GO:0008150
GO:
GO:0042742
MGI_trans_name:
Defb18-001
Vega_translation:
178800
Vega_translation:
OTTMUSP00000022960
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0006950
goslim_goa:
GO:0008150
protein_id:
AAY59765.1
OTTP:
OTTMUSP00000022960
OTTT:
OTTMUST00000049517
UniParc:
UPI00005E442A
definition
note
: transcript_id=ENSMUST00000097818
protein_id
: ENSMUSP00000095427
translation
: MQSTMKMFGIILMVIFSVSCGPSAPQMKTREVAERTHKCSLVRGTCKSECNSWEYKYNYCHTEPCCVVREYKRMEKLLSTPKYTT
name
type
misc_feature
link
xref
definition
note
: contig AC161367.4 40591..188588(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.