VariantTable
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name
Mitd1 (ENSMUSG00000026088)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Mitd1
note
: MIT, microtubule interacting and transport, domain containing 1 [Source:MGI Symbol;Acc:MGI:1916278]
name
Mrpl30 (ENSMUSG00000026087)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Mrpl30
note
: mitochondrial ribosomal protein L30 [Source:MGI Symbol;Acc:MGI:1333820]
name
Mitd1 (ENSMUSG00000026088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000139725
name
Mitd1 (ENSMUSG00000026088)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000027257
name
Mrpl30 (ENSMUSG00000026087)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000027256
name
Mrpl30 (ENSMUSG00000026087)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000193673
name
Mrpl30 (ENSMUSG00000026087)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000160082
name
Mitd1 (ENSMUSG00000026088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35542.1
Uniprot/SWISSPROT:
Q8VDV8
Vega_transcript:
Mitd1-002
Vega_transcript:
OTTMUST00000065791
UCSC:uc007asi.1
Fantom:
1500032H18
Fantom:
F830018J16
EMBL:
AK005342
EMBL:
AK171903
EMBL:
BC020137
GO:
GO:0000281
GO:
GO:0000920
GO:
GO:0006810
GO:
GO:0019898
GO:
GO:0019904
GO:
GO:0030496
GO:
GO:0031902
GO:
GO:0032091
GO:
GO:0035091
GO:
GO:0042803
GO:
GO:0043231
GO:
GO:0070062
MGI_trans_name:
Mitd1-002
PDB:
1WFD
Vega_translation:
179050
Vega_translation:
OTTMUSP00000032840
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005768
goslim_goa:
GO:0006810
goslim_goa:
GO:0007049
goslim_goa:
GO:0008150
goslim_goa:
GO:0008289
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0051301
protein_id:
AAH20137.1
protein_id:
BAB23964.1
protein_id:
BAE42727.1
OTTP:
OTTMUSP00000032840
OTTT:
OTTMUST00000065791
UniParc:
UPI00000E5D86
definition
note
: transcript_id=ENSMUST00000139725
protein_id
: ENSMUSP00000123009
translation
: MAKSSLGQDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQEKEDGKYHKQIKIEENATGFSYESLFREYLHETVTEVWIEDPYIRQTHQLYNFLRFCEMLIKKPCKVRTIHLLTSGYEGLGNTQQSSGLEEIKQSLGSHGVVLEINYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQGRFSLGYYDLDLRPCHETTVDIFHNKHTKKI
name
Mitd1 (ENSMUSG00000026088)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35542.1
Uniprot/SWISSPROT:
Q8VDV8
RefSeq_peptide:
NP_081189
RefSeq_mRNA:
NM_026913.2
Vega_transcript:
Mitd1-001
Vega_transcript:
OTTMUST00000065724
UCSC:uc007asi.1
Fantom:
1500032H18
Fantom:
F830018J16
EMBL:
AK005342
EMBL:
AK171903
EMBL:
BC020137
GO:
GO:0000281
GO:
GO:0000281
GO:
GO:0000920
GO:
GO:0000920
GO:
GO:0005515
GO:
GO:0006810
GO:
GO:0019898
GO:
GO:0019898
GO:
GO:0019904
GO:
GO:0019904
GO:
GO:0030496
GO:
GO:0030496
GO:
GO:0031902
GO:
GO:0032091
GO:
GO:0032091
GO:
GO:0035091
GO:
GO:0035091
GO:
GO:0042803
GO:
GO:0042803
GO:
GO:0043231
GO:
GO:0043231
GO:
GO:0070062
GO:
GO:0070062
MGI_trans_name:
Mitd1-001
PDB:
1WFD
Vega_translation:
179051
Vega_translation:
OTTMUSP00000032791
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005768
goslim_goa:
GO:0006810
goslim_goa:
GO:0007049
goslim_goa:
GO:0008150
goslim_goa:
GO:0008289
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0051301
protein_id:
AAH20137.1
protein_id:
BAB23964.1
protein_id:
BAE42727.1
OTTP:
OTTMUSP00000032791
OTTT:
OTTMUST00000065724
UniParc:
UPI00000E5D86
definition
note
: transcript_id=ENSMUST00000027257
protein_id
: ENSMUSP00000027257
translation
: MAKSSLGQDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQEKEDGKYHKQIKIEENATGFSYESLFREYLHETVTEVWIEDPYIRQTHQLYNFLRFCEMLIKKPCKVRTIHLLTSGYEGLGNTQQSSGLEEIKQSLGSHGVVLEINYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQGRFSLGYYDLDLRPCHETTVDIFHNKHTKKI
name
type
misc_feature
link
xref
definition
note
: contig AC119189.8 1..128095(-1)
name
Mitd1 (ENSMUSG00000026088)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000065792
Vega_transcript:
OTTMUST00000065792
MGI_trans_name:
Mitd1-003
OTTT:
OTTMUST00000065792
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000138806
name
Mrpl30 (ENSMUSG00000026087)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000065721
Vega_transcript:
OTTMUST00000065721
MGI_trans_name:
Mrpl30-002
OTTT:
OTTMUST00000065721
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000161694
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.