VariantTable
SequenceCutter
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name
Myo1b (ENSMUSG00000018417)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Myo1b
note
: myosin IB [Source:MGI Symbol;Acc:MGI:107752]
name
Myo1b (ENSMUSG00000018417)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000046390
name
Myo1b (ENSMUSG00000018417)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000114537
name
Myo1b (ENSMUSG00000018417)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000114541
name
Myo1b (ENSMUSG00000018417)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000018561
name
Myo1b (ENSMUSG00000018417)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14942.1
Uniprot/SWISSPROT:
P46735
RefSeq_peptide:
NP_034993
RefSeq_mRNA:
NM_010863.4
RefSeq_mRNA_predicted:
XM_006495766.1
RefSeq_peptide_predicted:
XP_006495829.1
Vega_transcript:
Myo1b-001
Vega_transcript:
OTTMUST00000039699
UCSC:uc007axr.3
Fantom:
C330006P18
EMBL:
AK141207
EMBL:
BC046300
EMBL:
CH466548
EMBL:
L00923
EMBL:
X69987
GO:
GO:0000146
GO:
GO:0005516
GO:
GO:0005524
GO:
GO:0005546
GO:
GO:0005547
GO:
GO:0005737
GO:
GO:0005769
GO:
GO:0005884
GO:
GO:0005886
GO:
GO:0005903
GO:
GO:0006892
GO:
GO:0007015
GO:
GO:0008152
GO:
GO:0010008
GO:
GO:0016459
GO:
GO:0030048
GO:
GO:0030175
GO:
GO:0032588
GO:
GO:0048471
GO:
GO:0051015
GO:
GO:0051017
GO:
GO:0070062
GO:
GO:0071944
MGI_trans_name:
Myo1b-001
Vega_translation:
179226
Vega_translation:
OTTMUSP00000017714
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005768
goslim_goa:
GO:0005794
goslim_goa:
GO:0005856
goslim_goa:
GO:0005886
goslim_goa:
GO:0006810
goslim_goa:
GO:0007010
goslim_goa:
GO:0008092
goslim_goa:
GO:0008150
goslim_goa:
GO:0008289
goslim_goa:
GO:0016192
goslim_goa:
GO:0022607
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
protein_id:
AAA39800.1
protein_id:
AAH46300.1
protein_id:
BAE24587.1
protein_id:
CAA49604.1
protein_id:
EDK99961.1
OTTP:
OTTMUSP00000017714
OTTT:
OTTMUST00000039699
UniParc:
UPI000000B9A5
definition
note
: transcript_id=ENSMUST00000046390
protein_id
: ENSMUSP00000040447
translation
: MAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNYLSLDSAKVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNGLDESKIKDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIRCIKPNDKKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKCRTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCKEAATTIAAYWHGTQARRELKRLKEEARRKHAVAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQKSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRTTLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP
name
Myo1b (ENSMUSG00000018417)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS69887.1
RefSeq_peptide:
NP_001277911
RefSeq_mRNA:
NM_001290982.1
RefSeq_mRNA_predicted:
XM_006495767.1
RefSeq_mRNA_predicted:
XM_006495768
RefSeq_peptide_predicted:
XP_006495830.1
Vega_transcript:
Myo1b-003
Vega_transcript:
OTTMUST00000039701
Uniprot/SPTREMBL:
E9QNH6
UCSC:uc007axt.3
EMBL:
AC108840
EMBL:
AC123555
EMBL:
AC138680
GO:
GO:0000146
GO:
GO:0005524
GO:
GO:0005769
GO:
GO:0005884
GO:
GO:0006892
GO:
GO:0007015
GO:
GO:0008152
GO:
GO:0010008
GO:
GO:0016459
GO:
GO:0032588
GO:
GO:0048471
GO:
GO:0051015
GO:
GO:0070062
MGI_trans_name:
Myo1b-003
Vega_translation:
179227
Vega_translation:
OTTMUSP00000017716
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005768
goslim_goa:
GO:0005794
goslim_goa:
GO:0005856
goslim_goa:
GO:0006810
goslim_goa:
GO:0007010
goslim_goa:
GO:0008092
goslim_goa:
GO:0008150
goslim_goa:
GO:0016192
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000017716
OTTT:
OTTMUST00000039701
UniParc:
UPI00000263FE
definition
note
: transcript_id=ENSMUST00000114537
protein_id
: ENSMUSP00000110184
translation
: MAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNYLSLDSAKVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNGLDESKIKDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIRCIKPNDKKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKCRTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCKEAATTIAAYWHGTQVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQKSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRTTLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP
name
Myo1b (ENSMUSG00000018417)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Myo1b-013
Vega_transcript:
OTTMUST00000041661
Uniprot/SPTREMBL:
E9Q580
UCSC:uc007axt.3
EMBL:
AC108840
EMBL:
AC123555
EMBL:
AC138680
GO:
GO:0000146
GO:
GO:0005524
GO:
GO:0005769
GO:
GO:0005884
GO:
GO:0006892
GO:
GO:0007015
GO:
GO:0008152
GO:
GO:0010008
GO:
GO:0016459
GO:
GO:0032588
GO:
GO:0048471
GO:
GO:0051015
GO:
GO:0070062
MGI_trans_name:
Myo1b-013
Vega_translation:
179228
Vega_translation:
OTTMUSP00000018713
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005768
goslim_goa:
GO:0005794
goslim_goa:
GO:0005856
goslim_goa:
GO:0006810
goslim_goa:
GO:0007010
goslim_goa:
GO:0008092
goslim_goa:
GO:0008150
goslim_goa:
GO:0016192
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000018713
OTTT:
OTTMUST00000041661
UniParc:
UPI0000DBECD0
definition
note
: transcript_id=ENSMUST00000114541
protein_id
: ENSMUSP00000110188
translation
: MPPLETMAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNYLSLDSAKVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNGLDESKIKDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIRCIKPNDKKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKCRTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCKEAATTIAAYWHGTQVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQKSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRTTLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP
name
Myo1b (ENSMUSG00000018417)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS48254.1
RefSeq_peptide:
NP_001155289
RefSeq_mRNA:
NM_001161817.2
RefSeq_mRNA_predicted:
XM_006495764.1
RefSeq_peptide_predicted:
XP_006495827.1
RefSeq_peptide_predicted:
XP_006495828.1
Vega_transcript:
Myo1b-002
Vega_transcript:
OTTMUST00000039700
Uniprot/SPTREMBL:
Q7TQD7
UCSC:uc007axs.3
EMBL:
AC108840
EMBL:
AC123555
EMBL:
AC138680
EMBL:
BC054786
GO:
GO:0000146
GO:
GO:0000146
GO:
GO:0005524
GO:
GO:0005546
GO:
GO:0005547
GO:
GO:0005737
GO:
GO:0005769
GO:
GO:0005769
GO:
GO:0005884
GO:
GO:0005884
GO:
GO:0005886
GO:
GO:0005903
GO:
GO:0006892
GO:
GO:0006892
GO:
GO:0007015
GO:
GO:0007015
GO:
GO:0008152
GO:
GO:0010008
GO:
GO:0010008
GO:
GO:0016459
GO:
GO:0030048
GO:
GO:0030175
GO:
GO:0030898
GO:
GO:0032588
GO:
GO:0032588
GO:
GO:0048471
GO:
GO:0048471
GO:
GO:0051015
GO:
GO:0051015
GO:
GO:0051017
GO:
GO:0070062
GO:
GO:0070062
GO:
GO:0071944
MGI_trans_name:
Myo1b-002
Vega_translation:
179229
Vega_translation:
OTTMUSP00000017715
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005768
goslim_goa:
GO:0005794
goslim_goa:
GO:0005856
goslim_goa:
GO:0006810
goslim_goa:
GO:0007010
goslim_goa:
GO:0008092
goslim_goa:
GO:0008150
goslim_goa:
GO:0016192
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
protein_id:
AAH54786.1
OTTP:
OTTMUSP00000017715
OTTT:
OTTMUST00000039700
UniParc:
UPI00001B0770
definition
note
: transcript_id=ENSMUST00000018561
protein_id
: ENSMUSP00000018561
translation
: MAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNYLSLDSAKVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNGLDESKIKDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIRCIKPNDKKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKCRTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCKEAATTIAAYWHGTQARRELRRLKDEARNKHAIAVIWAYWLGSKARRELKRLKEEARRKHAVAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQKSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRTTLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP
name
type
misc_feature
link
xref
definition
note
: contig AC138680.7 53795..175790(1)
name
Myo1b (ENSMUSG00000018417)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000039708
Vega_transcript:
OTTMUST00000039708
MGI_trans_name:
Myo1b-010
OTTT:
OTTMUST00000039708
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000140731
name
Myo1b (ENSMUSG00000018417)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000041662
Vega_transcript:
OTTMUST00000041662
MGI_trans_name:
Myo1b-014
OTTT:
OTTMUST00000041662
definition
note
: processed_transcript
note
: transcript_id=ENSMUST00000136273
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.