VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Nab1 (ENSMUSG00000002881)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Nab1
note
: Ngfi-A binding protein 1 [Source:MGI Symbol;Acc:MGI:107564]
name
Nab1 (ENSMUSG00000002881)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000186764
name
Nab1 (ENSMUSG00000002881)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000069792
name
Nab1 (ENSMUSG00000002881)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000170269
name
Nab1 (ENSMUSG00000002881)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide_predicted:
XP_006495834.1
Vega_transcript:
Nab1-003
Vega_transcript:
OTTMUST00000092060
Uniprot/SPTREMBL:
A0A087WSU4
UCSC:uc007ayh.2
EMBL:
AC164428
GO:
GO:0001958
GO:
GO:0005634
GO:
GO:0006355
GO:
GO:0008134
GO:
GO:0014037
GO:
GO:0042552
GO:
GO:0045682
GO:
GO:0045892
MGI_trans_name:
Nab1-003
Vega_translation:
179248
Vega_translation:
OTTMUSP00000050794
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0008134
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000050794
OTTT:
OTTMUST00000092060
UniParc:
UPI0000475AB4
definition
note
: transcript_id=ENSMUST00000186764
protein_id
: ENSMUSP00000141191
translation
: MATALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCNSYERSSSSREPHLKIPKCAATTCVQSLGQGKSEVGSLALQSVSDSRLWQGHHATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLSEVKELLKNNKKLAKMIGHIFEMSDEDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQVSREVTYKYTYRTTRLKCGERDELSPKRIKIEDGFPDFQESVPTLFQQARAKSEELAGLGSQAEKGMAKQMELLCAQAGYERLQQERRLTAGLYRQSSGEQSPDGGLPSDSSDGQGERPLNLRIPSVQNRQPHHFVVDGELSRLYSSEAKSHSSESLGILKDYPHSAFTLEKKVIKTEPEDSR
name
Nab1 (ENSMUSG00000002881)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14944.1
Uniprot/SWISSPROT:
Q61122
RefSeq_peptide:
NP_032693
RefSeq_mRNA:
NM_008667.3
RefSeq_mRNA_predicted:
XM_006495770
RefSeq_peptide_predicted:
XP_006495833.1
Vega_transcript:
Nab1-001
Vega_transcript:
OTTMUST00000092056
UCSC:uc007ayh.2
EMBL:
BC005627
EMBL:
BC016886
EMBL:
CH466548
EMBL:
U47008
GO:
GO:0001958
GO:
GO:0005634
GO:
GO:0006351
GO:
GO:0006355
GO:
GO:0008134
GO:
GO:0014037
GO:
GO:0042552
GO:
GO:0045682
GO:
GO:0045892
MGI_trans_name:
Nab1-001
Vega_translation:
179249
Vega_translation:
OTTMUSP00000050792
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0008134
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
AAC52649.1
protein_id:
AAH05627.1
protein_id:
AAH16886.1
protein_id:
EDK99971.1
OTTP:
OTTMUSP00000050792
OTTT:
OTTMUST00000092056
UniParc:
UPI0000020CB5
definition
note
: transcript_id=ENSMUST00000069792
protein_id
: ENSMUSP00000066696
translation
: MATALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCNSYERSSSSREPHLKIPKCAATTCVQSLGQGKSEVGSLALQSVSDSRLWQGHHATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLSEVKELLKNNKKLAKMIGHIFEMSDEDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQVSREVTYKYTYRTTRLKCGERDELSPKRIKIEDGFPDFQESVPTLFQQARAKSEELAGLGSQQAEKGMAKQMELLCAQAGYERLQQERRLTAGLYRQSSGEQSPDGGLPSDSSDGQGERPLNLRIPSVQNRQPHHFVVDGELSRLYSSEAKSHSSESLGILKDYPHSAFTLEKKVIKTEPEDSR
name
Nab1 (ENSMUSG00000002881)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Nab1-002
Vega_transcript:
OTTMUST00000092057
Uniprot/SPTREMBL:
E9PZ64
UCSC:uc007ayh.2
EMBL:
AC164428
GO:
GO:0001958
GO:
GO:0005634
GO:
GO:0006355
GO:
GO:0008134
GO:
GO:0014037
GO:
GO:0042552
GO:
GO:0045682
GO:
GO:0045892
MGI_trans_name:
Nab1-002
Vega_translation:
179250
Vega_translation:
OTTMUSP00000050793
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0008134
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000050793
OTTT:
OTTMUST00000092057
UniParc:
UPI0001F794D2
definition
note
: transcript_id=ENSMUST00000170269
protein_id
: ENSMUSP00000131239
translation
: MATALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCNSYERSSSSREPHLKIPKCAATTCVQSLGQGKSEVGSLALQSVSDSRLWQGHHATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLSEVKELLKNNKKLAKMIGHIFEMSDEDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQVSREVTYKYTYRTTRLKCGERDELSPKRIKIEQAEKGMAKQMELLCAQAGYERLQQERRLTAGLYRQSSGEQSPDGGLPSDSSDGQGERPLNLRIPSVQNRQPHHFVVDGELSRLYSSEAKSHSSESLGILKDYPHSAFTLEKKVIKTEPEDSR
name
type
misc_feature
link
xref
definition
note
: contig AC164428.4 107607..170692(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.